FFCP PHASE1:Mm9::chr3:50247525..50247537,-: Difference between revisions
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{{FFCP|EntrezGene=26570|HGNC=|UniProt=Q9WTR6,Q542C8,Q8BYV9|association_with_transcript=0bp_to_ENSMUST00000029297,ENSMUST00000142932,NM_011990,uc008pdi.1,uc008pdj.1_5end|description=CAGE_peak_4_at_Slc7a11_5end|id=chr3:50247525..50247537,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0050686,5.11e-09,6|ontology_enrichment_uberon=UBERON:0000153!1.30e-12!94;UBERON:0007811!9.55e-12!86;UBERON:0000063!5.67e-08!35;UBERON:0000072!3.29e-07!27;UBERON:0000033!3.58e-07!63;UBERON:0000064!7.72e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0000072,8.20e-13,27;UBERON:0002370,4.80e-10,23;UBERON:0000974,4.80e-10,23;UBERON:0004807,4.80e-10,23;UBERON:0005058,4.80e-10,23;UBERON:0003351,4.80e-10,23;UBERON:0009113,4.80e-10,23;UBERON:0003295,4.80e-10,23;UBERON:0009722,4.80e-10,23;UBERON:0005562,4.80e-10,23;UBERON:0007690,4.80e-10,23;UBERON:0006562,1.76e-09,24;UBERON:0003408,1.76e-09,24;UBERON:0001557,1.76e-09,24;UBERON:0001042,1.76e-09,24;UBERON:0008814,1.76e-09,24;UBERON:0009145,1.76e-09,24;UBERON:0007811,2.64e-07,36;UBERON:0004177,2.94e-07,29;UBERON:0005057,2.94e-07,29;UBERON:0000065,6.04e-07,41|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0.281577444303333,0.468129052643987,2.73948749160808,2.87179772383211,0,0,0,1.61980213911861,0,0,0,0,0.680346321208558,0.496454756004426,0.261199789138935,0.319984845586813,0.45881856213434,0,0,0,0.190023419456374,0,0.221730510655305,1.90509202037889,1.23012957516914,15.8481681015439,0,0,0,2.51118978442145,3.906676722619,1.0470474879476,14.7057872007754,10.9287277593351,5.34061388334269,0.251793635951155,0.202753862439029,0.183546752161682,1.56478268869608,0.436050312760893,0,0.388859798148567,0.279972843250725,0,0,0,0,2.31533492432352,2.57880095944881,1.03134418455488,0.404632921719196,0,0.633831403506179,2.03306719241479,0.889294796111139,0,0,0,0.599200221036809,0.384218305321555,0.103689612308478,0,0,0.571301968807607,0.883474163806454,0.122490799214954,0.383381884072945,0,1.10115880999389,0.893811366596314,1.0752457327937,0,0.182975287204819,0.52091337055676,0.279182999001381,2.8138130501584,2.29197371665215,1.17851434189467,0.711858403995515,0.186399445825301,1.13589289999776,1.88928900266964,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0.259786004602869,0,0,1.28326477414318,0,0,3.030874574157,2.78695852022608,2.52762222507392,0.45673551887624,1.29468941823586,0,0.346970653532272,0,0.461230994512117,0.150722640552623,0,0,0,0,0,0,0,0,0,0.585561594023094,0.83778682725382,0,1.1981512450592,0.599902730993408,0.508280908292259,1.04853447583376,0.915001205637253,0.502617408451458,1.56441888173049,1.27857728665165,1.24672826735736,1.1356888414743,0.203678727700633,0.124406970610093,1.51633655060205,11.5743020737561,0.260240885925407,0,0.540186389416048,0.30140963567143,0.136072998302656,0.896796041993948,0.374806898238915,1.81092359517311,0.215567992932842,0.378212160335639,0,0.219195732427575,0.556094498451196,0.348252166522167,0.61734640922383,0,0,0.772043721344145,0,0,0,0,0,0,0.308534225774757,0,0,0.116765342367169,0,0,0,0,0,0,1.68231958851302,1.23485534855141,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432276099749388,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0,0,0,0,0.275936746304732,1.60550589987792,0.703270119553219,0.819674726883377,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,2.24924921495265,0.425820255624806,0,0,0.494910368917606,0,0,0,0,0.295301892880773,0.614870295887855,0.516856586336442,0.727067458955011,0.356497378384721,1.8962205476149,0,0,0,0,0.129358683782755,0.214337035031592,0,0.356737635204141,0.493647061806363,0,0,0,0.441056796109924,0.32977250588296,0.161464426695906,0.241251699712623,0.358117032009409,0.820704498725306,0,0.370850604021019,0.341741761595705,0,0.370389054739423,0,0.27338845544205,0,3.56954702987096,2.51912614182584,1.38199973804424,0,0.158167996790568,0.203319467126849,0,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0.645799117388655,0,0.117357238645754,0.13020438484395,0,0.241584120826006,0.576060012515731,6.63623353319174,0,0,0.25984164595559,0.895133478337407,2.18549490259391,3.60586348559907,3.10148007066612,4.64445669761479,4.64861520595499,5.24296162711571,4.58052039476836,3.84847366561318,10.9864288050675,0.680191150845634,0,0.0897138566094757,0,0.386379188064381,0.375364950902364,1.09890974560359,0.214368379079066,0,1.6942555278512,1.84130094602871,0.572895513439397,1.03111909406213,0,0,2.02506750069542,0.900642406448441,0.906284817968409,0.51776031175182,0.103787347584177,0.798049746802062,0.341467211508268,0.486213434136588,0,0.551530525350042,0.44449345560323,0,0.962757628775446,0.505394423527595,0,0,0.0936415074698824,0.192075457214608,0.114870937911227,0,0,0,0.412085900803307,0.147198920134397,0.342869252385415,0.70990322463735,0,0.436039249896986,0.282328141245992,0.169229215783353,0,0.263069711437843,0.407412341537585,0,0.118635018124174,0.197008964751127,0,0.309873682371932,0.192906610981141,0.499621155875892,0.233931608445408,0.429742108096597,0.382576664137687,0,0|short_description=p4@Slc7a11}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:26570 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9WTR6,uniprot:Q542C8,uniprot:Q8BYV9 | |||
|association_with_transcript=0bp_to_ENSMUST00000029297,ENSMUST00000142932,NM_011990,uc008pdi.1,uc008pdj.1_5end | |||
|cluster_id=chr3:50247525..50247537,- | |||
|description=CAGE_peak_4_at_Slc7a11_5end | |||
|id=chr3:50247525..50247537,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,5.11e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0000153!1.30e-12!94;UBERON:0007811!9.55e-12!86;UBERON:0000063!5.67e-08!35;UBERON:0000072!3.29e-07!27;UBERON:0000033!3.58e-07!63;UBERON:0000064!7.72e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000072,8.20e-13,27;UBERON:0002370,4.80e-10,23;UBERON:0000974,4.80e-10,23;UBERON:0004807,4.80e-10,23;UBERON:0005058,4.80e-10,23;UBERON:0003351,4.80e-10,23;UBERON:0009113,4.80e-10,23;UBERON:0003295,4.80e-10,23;UBERON:0009722,4.80e-10,23;UBERON:0005562,4.80e-10,23;UBERON:0007690,4.80e-10,23;UBERON:0006562,1.76e-09,24;UBERON:0003408,1.76e-09,24;UBERON:0001557,1.76e-09,24;UBERON:0001042,1.76e-09,24;UBERON:0008814,1.76e-09,24;UBERON:0009145,1.76e-09,24;UBERON:0007811,2.64e-07,36;UBERON:0004177,2.94e-07,29;UBERON:0005057,2.94e-07,29;UBERON:0000065,6.04e-07,41 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0.281577444303333,0.468129052643987,2.73948749160808,2.87179772383211,0,0,0,1.61980213911861,0,0,0,0,0.680346321208558,0.496454756004426,0.261199789138935,0.319984845586813,0.45881856213434,0,0,0,0.190023419456374,0,0.221730510655305,1.90509202037889,1.23012957516914,15.8481681015439,0,0,0,2.51118978442145,3.906676722619,1.0470474879476,14.7057872007754,10.9287277593351,5.34061388334269,0.251793635951155,0.202753862439029,0.183546752161682,1.56478268869608,0.436050312760893,0,0.388859798148567,0.279972843250725,0,0,0,0,2.31533492432352,2.57880095944881,1.03134418455488,0.404632921719196,0,0.633831403506179,2.03306719241479,0.889294796111139,0,0,0,0.599200221036809,0.384218305321555,0.103689612308478,0,0,0.571301968807607,0.883474163806454,0.122490799214954,0.383381884072945,0,1.10115880999389,0.893811366596314,1.0752457327937,0,0.182975287204819,0.52091337055676,0.279182999001381,2.8138130501584,2.29197371665215,1.17851434189467,0.711858403995515,0.186399445825301,1.13589289999776,1.88928900266964,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0.259786004602869,0,0,1.28326477414318,0,0,3.030874574157,2.78695852022608,2.52762222507392,0.45673551887624,1.29468941823586,0,0.346970653532272,0,0.461230994512117,0.150722640552623,0,0,0,0,0,0,0,0,0,0.585561594023094,0.83778682725382,0,1.1981512450592,0.599902730993408,0.508280908292259,1.04853447583376,0.915001205637253,0.502617408451458,1.56441888173049,1.27857728665165,1.24672826735736,1.1356888414743,0.203678727700633,0.124406970610093,1.51633655060205,11.5743020737561,0.260240885925407,0,0.540186389416048,0.30140963567143,0.136072998302656,0.896796041993948,0.374806898238915,1.81092359517311,0.215567992932842,0.378212160335639,0,0.219195732427575,0.556094498451196,0.348252166522167,0.61734640922383,0,0,0.772043721344145,0,0,0,0,0,0,0.308534225774757,0,0,0.116765342367169,0,0,0,0,0,0,1.68231958851302,1.23485534855141,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432276099749388,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0,0,0,0,0.275936746304732,1.60550589987792,0.703270119553219,0.819674726883377,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,2.24924921495265,0.425820255624806,0,0,0.494910368917606,0,0,0,0,0.295301892880773,0.614870295887855,0.516856586336442,0.727067458955011,0.356497378384721,1.8962205476149,0,0,0,0,0.129358683782755,0.214337035031592,0,0.356737635204141,0.493647061806363,0,0,0,0.441056796109924,0.32977250588296,0.161464426695906,0.241251699712623,0.358117032009409,0.820704498725306,0,0.370850604021019,0.341741761595705,0,0.370389054739423,0,0.27338845544205,0,3.56954702987096,2.51912614182584,1.38199973804424,0,0.158167996790568,0.203319467126849,0,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0.645799117388655,0,0.117357238645754,0.13020438484395,0,0.241584120826006,0.576060012515731,6.63623353319174,0,0,0.25984164595559,0.895133478337407,2.18549490259391,3.60586348559907,3.10148007066612,4.64445669761479,4.64861520595499,5.24296162711571,4.58052039476836,3.84847366561318,10.9864288050675,0.680191150845634,0,0.0897138566094757,0,0.386379188064381,0.375364950902364,1.09890974560359,0.214368379079066,0,1.6942555278512,1.84130094602871,0.572895513439397,1.03111909406213,0,0,2.02506750069542,0.900642406448441,0.906284817968409,0.51776031175182,0.103787347584177,0.798049746802062,0.341467211508268,0.486213434136588,0,0.551530525350042,0.44449345560323,0,0.962757628775446,0.505394423527595,0,0,0.0936415074698824,0.192075457214608,0.114870937911227,0,0,0,0.412085900803307,0.147198920134397,0.342869252385415,0.70990322463735,0,0.436039249896986,0.282328141245992,0.169229215783353,0,0.263069711437843,0.407412341537585,0,0.118635018124174,0.197008964751127,0,0.309873682371932,0.192906610981141,0.499621155875892,0.233931608445408,0.429742108096597,0.382576664137687,0,0 | |||
|short_description=p4@Slc7a11 | |||
}} |
Revision as of 19:45, 3 August 2015
Short description: | p4@Slc7a11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Slc7a11_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000029297, ENSMUST00000142932, NM_011990, uc008pdi.1, uc008pdj.1_5end |
EntrezGene: | 26570 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
segment of respiratory tract | 8.20e-13 | 27 |
thymus | 4.80e-10 | 23 |
neck | 4.80e-10 | 23 |
respiratory system epithelium | 4.80e-10 | 23 |
hemolymphoid system gland | 4.80e-10 | 23 |
pharyngeal epithelium | 4.80e-10 | 23 |
thymic region | 4.80e-10 | 23 |
pharyngeal gland | 4.80e-10 | 23 |
entire pharyngeal arch endoderm | 4.80e-10 | 23 |
thymus primordium | 4.80e-10 | 23 |
early pharyngeal endoderm | 4.80e-10 | 23 |
pharynx | 1.76e-09 | 24 |
gland of gut | 1.76e-09 | 24 |
upper respiratory tract | 1.76e-09 | 24 |
chordate pharynx | 1.76e-09 | 24 |
pharyngeal arch system | 1.76e-09 | 24 |
pharyngeal region of foregut | 1.76e-09 | 24 |
craniocervical region | 2.64e-07 | 36 |
hemopoietic organ | 2.94e-07 | 29 |
immune organ | 2.94e-07 | 29 |
respiratory tract | 6.04e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 5.11e-09 | 6 |