Personal tools

FFCP PHASE1:Mm9::chr7:105326649..105326742,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=12337|HGNC=|UniProt=O08688,Q3TPL4|association_with_transcript=0bp_to_NM_007602,uc009ikd.1_5end|description=CAGE_peak_1_at_Capn5_5end|id=chr7:105326649..105326742,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!7.39e-09!34;UBERON:0000064!1.23e-08!99;UBERON:0000073!1.40e-08!75;UBERON:0001016!1.40e-08!75;UBERON:0001017!4.71e-08!73;UBERON:0005743!4.71e-08!73;UBERON:0001049!1.44e-07!52;UBERON:0005068!1.44e-07!52;UBERON:0006241!1.44e-07!52;UBERON:0007135!1.44e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0011216,5.80e-10,194;UBERON:0002020,7.36e-09,34;UBERON:0001016,1.39e-08,75;UBERON:0001017,4.69e-08,73;UBERON:0000073,7.47e-08,54;UBERON:0001049,1.43e-07,52;UBERON:0005068,1.43e-07,52;UBERON:0006241,1.43e-07,52;UBERON:0007135,1.43e-07,52|phase1_expression=5.76535849577258,19.5426228278042,19.1099680543605,3.62957053568196,7.01254021924886,14.1018588405987,14.9512089981136,0.129123323441576,0,0,0,0,0.171200729931206,0,13.3243904726265,15.9955461237963,32.8794082720229,2.05050407482854,1.50825876966313,1.69755860719212,7.73893940374735,32.3688500914886,13.8435888243636,14.7193028969934,17.2056960800378,18.9496548157957,18.5227658348402,14.6520438226405,9.12112413390595,8.31699428207772,15.299405235216,10.7955214488137,13.5314253268605,15.8481681015439,6.35473563452804,4.15586613396231,6.73758875665818,0.837063261473815,0,1.0470474879476,0,0,0,6.16894408080329,5.87986201073184,7.89251034295231,9.38869613217647,7.19483016055474,12.5221124158649,9.13820525649132,7.97922603264566,1.43752564364972,1.34226084846189,0.725362142011344,0,2.31533492432352,4.01146815914259,4.12537673821954,10.5204559646991,11.1088105647127,13.3104594736298,8.13226876965917,8.00365316500025,10.3488467487361,9.88866362566974,7.8152812644071,11.9840044207362,13.0634223809329,4.25127410464758,7.02030879324791,5.46844899513593,33.1355141908412,31.3633328151291,7.22695715368229,8.33855597858656,8.27296907949019,7.70811166995721,12.0026097800076,9.5236050618871,13.3205150607496,14.1805847583735,15.106487746146,11.1673199600552,9.56696437053856,13.1406493088057,24.1595440088408,21.3557521198654,12.8615617619457,7.64834552665159,41.3376433784117,11.0148505706638,0.860423876981386,2.03991400112325,1.61910957491345,0,0.448026887097336,4.49422144421606,4.4311883870295,2.59786004602869,4.24007489412408,27.8869971157827,0,0,7.11066703153331,15.5873549528074,17.4818307177818,14.1546844604139,3.08296475241462,1.55362730188303,3.56261133755579,3.99016251562112,7.91610243611567,3.22861696158482,4.82312449768392,5.05631440683531,2.76466500925286,6.67426412882809,3.47038456607788,17.6922110389975,5.17653919831709,9.93786833071771,10.1823803158397,7.45567044872489,4.09893115816166,4.81727425670947,13.2837668708468,5.75112597628417,2.39961092397363,2.66847476853436,10.4853447583376,9.60751265919116,10.178002521142,10.9509321721134,10.4843337505436,12.0517065844545,11.356888414743,4.27725328171328,12.4406970610093,15.6688110228878,4.62972082950243,2.47228841629137,2.06911893990126,3.06105620669094,4.21973489940002,4.83059143974428,2.94661556655154,5.05989312622536,3.62184719034622,1.72454394346274,3.78212160335639,4.92663147659057,3.06874025398605,4.17070873838397,6.96504333044333,4.32142486456681,5.17489093728082,2.80885274925294,1.28673953557358,0.852490498186778,6.42089894860056,4.69052119962192,2.34080679899319,2.84093682702252,2.36117078096885,3.08534225774756,1.16266972375204,1.87791380979733,0.934122738937356,1.31647879930784,2.46251196118643,2.51313309592153,1.75439984910399,2.41505126820156,2.14730270016595,15.9820360908737,11.6282211988591,9.58214470653014,11.1069237998689,2.34617075588757,3.71578674976702,5.54130083685001,8.26902450955704,5.55945109612176,5.70676878337677,6.16887780007865,3.12928013975621,3.77002813200404,6.56556357735798,3.50935356814416,8.98819408654222,4.10662294761919,5.17767310461355,9.293727146701,8.3401414205102,12.3978509240388,7.94240178596726,7.95205197387266,9.60860732497364,8.78987866027176,4.87113488332687,6.12295038581362,5.42947521255922,2.37162101669719,20.6887931087957,19.4593405162071,20.2375901146368,19.8802918960733,16.4000468631643,10.9489116266011,9.20627639842594,6.64754429777645,6.31491250332587,5.75072826109418,3.72140947668503,1.87222603868736,2.52578877947112,1.07638448113147,1.4473305640901,7.20537441649758,1.32643988239339,3.42226450528254,3.05541154395339,3.52035372432753,5.69521275302174,4.99891645860629,12.4885534628991,4.25614889086716,5.09368786192182,5.58091690301205,6.39066927391378,4.83517949224508,7.5217510462386,4.52373851817817,12.5098307278303,7.86822836830458,8.00216564283724,9.15138362930414,15.1203075703942,0.983609672260053,3.53459298086122,1.57754109708128,3.90438744296638,6.89354872744957,8.12493913038677,9.35754431146055,15.286132662597,6.07216052512342,6.42962887404886,5.53402889125133,5.78378369559253,10.3616262202036,6.41036173202119,7.32991317091092,12.3727592229402,3.98235415019888,5.09839335925461,6.34879469625977,5.28094223316515,6.20133975049623,6.7635732547664,4.13485269069154,6.18007340111759,9.62542921638748,4.10847785316561,7.37930260024991,3.09406629744561,3.40439605753788,3.78128297465751,4.78627129996192,4.92975180572662,3.90148514013002,7.13475270408282,5.59466670047211,11.5696680663548,4.4587624532105,1.48282449604674,15.4369878638473,8.73897140589844,4.52100394748536,3.67908842061751,6.56547892017251,7.2221995887827,6.12109756922687,10.198391610578,16.232733675796,4.74689796315412,6.48180845793991,20.9088987275207,16.403307326523,16.9295848172827,5.60928818979723,6.85762116385924,8.84479832348312,9.54670618015114,5.06137589729817,6.70954241518601,6.48032044930808,5.85447228840512,4.80397640241591,7.95699643670442,9.6704543198643,5.23511883968059,22.9418502726473,11.8054469486516,0.56369293868419,2.24274819065968,2.48187735685646,9.33365704051429,6.45799117388655,6.75824501963113,6.68936260280798,6.51021924219751,3.8797957437513,0.966336483304024,0.864090018773596,7.90027801570446,25.3406519112705,36.5651007506785,32.6101265674265,23.2734704367726,18.4773659946576,11.2983722548771,8.12292399460175,10.8034101444518,12.04067545149,9.17518284745249,7.40679893622118,7.5045236479457,8.6488907614361,3.40095575422817,2.66383144048878,0.538283139656854,3.18980771091749,22.9895616898307,7.69498149349846,32.9672923681077,18.4356806007997,16.551879433167,15.8130515932779,13.8097570952153,14.8952833494243,13.4045482228076,12.3314853558716,7.55393897389701,8.77529250301348,8.55610286126019,6.79713613476307,11.9084871702919,2.69847103718859,8.37952234142165,6.14640980714883,5.83456120963906,7.54607385460736,5.1476182366004,4.88942801163553,5.56294654545014,6.4183841918363,6.82282471762253,6.33698249725599,6.22466926574051,5.05664140337365,7.17081706934536,5.05432126809397,5.71552429539688,6.60540657885676,6.75182271622968,2.88460130562315,5.5935589651071,5.48590803816665,5.50174999093946,5.24559617884106,5.23247099876383,6.11710972699649,5.753793336634,4.57319932181931,4.20911538300549,5.83957689537206,8.41713407486608,5.57584585183618,4.43270170690036,4.09231043169689,8.36658942404216,5.98010494041538,8.24374907195222,5.38042699424439,5.15690529715916,7.84282161482258,8.82365676478062,8.57910991795559|short_description=p1@Capn5}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:12337
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:O08688,uniprot:Q3TPL4
|association_with_transcript=0bp_to_NM_007602,uc009ikd.1_5end
|cluster_id=chr7:105326649..105326742,-
|description=CAGE_peak_1_at_Capn5_5end
|id=chr7:105326649..105326742,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!7.39e-09!34;UBERON:0000064!1.23e-08!99;UBERON:0000073!1.40e-08!75;UBERON:0001016!1.40e-08!75;UBERON:0001017!4.71e-08!73;UBERON:0005743!4.71e-08!73;UBERON:0001049!1.44e-07!52;UBERON:0005068!1.44e-07!52;UBERON:0006241!1.44e-07!52;UBERON:0007135!1.44e-07!52
|ontology_enrichment_uberon_v019_2=UBERON:0011216,5.80e-10,194;UBERON:0002020,7.36e-09,34;UBERON:0001016,1.39e-08,75;UBERON:0001017,4.69e-08,73;UBERON:0000073,7.47e-08,54;UBERON:0001049,1.43e-07,52;UBERON:0005068,1.43e-07,52;UBERON:0006241,1.43e-07,52;UBERON:0007135,1.43e-07,52
|phase1_expression=5.76535849577258,19.5426228278042,19.1099680543605,3.62957053568196,7.01254021924886,14.1018588405987,14.9512089981136,0.129123323441576,0,0,0,0,0.171200729931206,0,13.3243904726265,15.9955461237963,32.8794082720229,2.05050407482854,1.50825876966313,1.69755860719212,7.73893940374735,32.3688500914886,13.8435888243636,14.7193028969934,17.2056960800378,18.9496548157957,18.5227658348402,14.6520438226405,9.12112413390595,8.31699428207772,15.299405235216,10.7955214488137,13.5314253268605,15.8481681015439,6.35473563452804,4.15586613396231,6.73758875665818,0.837063261473815,0,1.0470474879476,0,0,0,6.16894408080329,5.87986201073184,7.89251034295231,9.38869613217647,7.19483016055474,12.5221124158649,9.13820525649132,7.97922603264566,1.43752564364972,1.34226084846189,0.725362142011344,0,2.31533492432352,4.01146815914259,4.12537673821954,10.5204559646991,11.1088105647127,13.3104594736298,8.13226876965917,8.00365316500025,10.3488467487361,9.88866362566974,7.8152812644071,11.9840044207362,13.0634223809329,4.25127410464758,7.02030879324791,5.46844899513593,33.1355141908412,31.3633328151291,7.22695715368229,8.33855597858656,8.27296907949019,7.70811166995721,12.0026097800076,9.5236050618871,13.3205150607496,14.1805847583735,15.106487746146,11.1673199600552,9.56696437053856,13.1406493088057,24.1595440088408,21.3557521198654,12.8615617619457,7.64834552665159,41.3376433784117,11.0148505706638,0.860423876981386,2.03991400112325,1.61910957491345,0,0.448026887097336,4.49422144421606,4.4311883870295,2.59786004602869,4.24007489412408,27.8869971157827,0,0,7.11066703153331,15.5873549528074,17.4818307177818,14.1546844604139,3.08296475241462,1.55362730188303,3.56261133755579,3.99016251562112,7.91610243611567,3.22861696158482,4.82312449768392,5.05631440683531,2.76466500925286,6.67426412882809,3.47038456607788,17.6922110389975,5.17653919831709,9.93786833071771,10.1823803158397,7.45567044872489,4.09893115816166,4.81727425670947,13.2837668708468,5.75112597628417,2.39961092397363,2.66847476853436,10.4853447583376,9.60751265919116,10.178002521142,10.9509321721134,10.4843337505436,12.0517065844545,11.356888414743,4.27725328171328,12.4406970610093,15.6688110228878,4.62972082950243,2.47228841629137,2.06911893990126,3.06105620669094,4.21973489940002,4.83059143974428,2.94661556655154,5.05989312622536,3.62184719034622,1.72454394346274,3.78212160335639,4.92663147659057,3.06874025398605,4.17070873838397,6.96504333044333,4.32142486456681,5.17489093728082,2.80885274925294,1.28673953557358,0.852490498186778,6.42089894860056,4.69052119962192,2.34080679899319,2.84093682702252,2.36117078096885,3.08534225774756,1.16266972375204,1.87791380979733,0.934122738937356,1.31647879930784,2.46251196118643,2.51313309592153,1.75439984910399,2.41505126820156,2.14730270016595,15.9820360908737,11.6282211988591,9.58214470653014,11.1069237998689,2.34617075588757,3.71578674976702,5.54130083685001,8.26902450955704,5.55945109612176,5.70676878337677,6.16887780007865,3.12928013975621,3.77002813200404,6.56556357735798,3.50935356814416,8.98819408654222,4.10662294761919,5.17767310461355,9.293727146701,8.3401414205102,12.3978509240388,7.94240178596726,7.95205197387266,9.60860732497364,8.78987866027176,4.87113488332687,6.12295038581362,5.42947521255922,2.37162101669719,20.6887931087957,19.4593405162071,20.2375901146368,19.8802918960733,16.4000468631643,10.9489116266011,9.20627639842594,6.64754429777645,6.31491250332587,5.75072826109418,3.72140947668503,1.87222603868736,2.52578877947112,1.07638448113147,1.4473305640901,7.20537441649758,1.32643988239339,3.42226450528254,3.05541154395339,3.52035372432753,5.69521275302174,4.99891645860629,12.4885534628991,4.25614889086716,5.09368786192182,5.58091690301205,6.39066927391378,4.83517949224508,7.5217510462386,4.52373851817817,12.5098307278303,7.86822836830458,8.00216564283724,9.15138362930414,15.1203075703942,0.983609672260053,3.53459298086122,1.57754109708128,3.90438744296638,6.89354872744957,8.12493913038677,9.35754431146055,15.286132662597,6.07216052512342,6.42962887404886,5.53402889125133,5.78378369559253,10.3616262202036,6.41036173202119,7.32991317091092,12.3727592229402,3.98235415019888,5.09839335925461,6.34879469625977,5.28094223316515,6.20133975049623,6.7635732547664,4.13485269069154,6.18007340111759,9.62542921638748,4.10847785316561,7.37930260024991,3.09406629744561,3.40439605753788,3.78128297465751,4.78627129996192,4.92975180572662,3.90148514013002,7.13475270408282,5.59466670047211,11.5696680663548,4.4587624532105,1.48282449604674,15.4369878638473,8.73897140589844,4.52100394748536,3.67908842061751,6.56547892017251,7.2221995887827,6.12109756922687,10.198391610578,16.232733675796,4.74689796315412,6.48180845793991,20.9088987275207,16.403307326523,16.9295848172827,5.60928818979723,6.85762116385924,8.84479832348312,9.54670618015114,5.06137589729817,6.70954241518601,6.48032044930808,5.85447228840512,4.80397640241591,7.95699643670442,9.6704543198643,5.23511883968059,22.9418502726473,11.8054469486516,0.56369293868419,2.24274819065968,2.48187735685646,9.33365704051429,6.45799117388655,6.75824501963113,6.68936260280798,6.51021924219751,3.8797957437513,0.966336483304024,0.864090018773596,7.90027801570446,25.3406519112705,36.5651007506785,32.6101265674265,23.2734704367726,18.4773659946576,11.2983722548771,8.12292399460175,10.8034101444518,12.04067545149,9.17518284745249,7.40679893622118,7.5045236479457,8.6488907614361,3.40095575422817,2.66383144048878,0.538283139656854,3.18980771091749,22.9895616898307,7.69498149349846,32.9672923681077,18.4356806007997,16.551879433167,15.8130515932779,13.8097570952153,14.8952833494243,13.4045482228076,12.3314853558716,7.55393897389701,8.77529250301348,8.55610286126019,6.79713613476307,11.9084871702919,2.69847103718859,8.37952234142165,6.14640980714883,5.83456120963906,7.54607385460736,5.1476182366004,4.88942801163553,5.56294654545014,6.4183841918363,6.82282471762253,6.33698249725599,6.22466926574051,5.05664140337365,7.17081706934536,5.05432126809397,5.71552429539688,6.60540657885676,6.75182271622968,2.88460130562315,5.5935589651071,5.48590803816665,5.50174999093946,5.24559617884106,5.23247099876383,6.11710972699649,5.753793336634,4.57319932181931,4.20911538300549,5.83957689537206,8.41713407486608,5.57584585183618,4.43270170690036,4.09231043169689,8.36658942404216,5.98010494041538,8.24374907195222,5.38042699424439,5.15690529715916,7.84282161482258,8.82365676478062,8.57910991795559
|short_description=p1@Capn5
}}

Revision as of 20:11, 3 August 2015

Short description:p1@Capn5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Capn5_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_NM_007602, uc009ikd.1_5end
EntrezGene:12337
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Capn5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I519.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I619.11
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.63
CD326+ enterocyte, pool2.CNhs13197.11849-124I47.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I714.10
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I814.95
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A113.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A316.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A532.88
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.51
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H232.37
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I913.84
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D114.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D217.21
GP2+ M cell, pool1.CNhs13228.11845-124H918.95
GP2+ M cell, pool2.CNhs13231.11846-124I118.52
GP2+ M cell, pool3.CNhs13240.11847-124I214.65
Ileum epithelium, pool1.CNhs13199.10252-104B99.12
Ileum epithelium, pool2.CNhs13232.10253-104C18.32
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C815.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310.80
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G613.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.35
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.74
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.17
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.88
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.89
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B79.39
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.19
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B812.52
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C39.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C310.52
Mouse Granule cells, donor2.CNhs12357.11731-123E311.11
Mouse Granule cells, donor3.CNhs12108.11636-122C713.31
Mouse Meningeal cells, donor1.CNhs12132.11716-123C68.13
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C710.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E79.89
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C811.98
Mouse Microglia, donor2.CNhs12634.11736-123E813.06
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.25
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.02
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F133.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D531.36
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.23
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.52
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D815.11
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.17
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I613.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D624.16
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F621.36
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.86
Mouse Schwann, donor1.CNhs12507.11728-123D97.65
Mouse Schwann, donor2.CNhs12573.11746-123F941.34
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.01
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.24
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G627.89
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G115.59
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G217.48
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G314.15
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.08
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D73.56
adrenal gland, embryo E14.CNhs11038.406-44C53.99
adrenal gland, embryo E16.CNhs11004.1254-43D67.92
adrenal gland, embryo E17.CNhs11043.1263-45I13.23
adrenal gland, embryo E18.CNhs11026.1262-18F54.82
adrenal gland, neonate N00.CNhs11191.1311-23C15.06
adrenal gland, neonate N25.CNhs11223.1377-27I32.76
amnion, adult pregnant day17.5.CNhs10488.583-22A86.67
aorta, adult.CNhs10498.46-23H13.47
bone (os femoris), adult.CNhs10483.56-12G217.69
bone (os femoris), neonate N02.CNhs11227.1985-43F55.18
bone (os femoris), neonate N16.CNhs11225.1525-43A69.94
bone (os femoris), neonate N20.CNhs11195.1350-25C310.18
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I24.82
colon, adult.CNhs10468.36-18H713.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.75
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.67
corpora quadrigemina, adult.CNhs10501.16-22A410.49
corpus striatum, adult.CNhs10487.19-21D89.61
corpus striatum, neonate N00.CNhs11226.630-43F110.18
cortex, adult.CNhs10473.12-14D510.95
cortex, neonate N30.CNhs11107.1392-42F210.48
diencephalon, adult.CNhs10482.20-12F212.05
diencephalon, neonate N30.CNhs11201.1388-42B211.36
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.28
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A212.44
epididymis, adult.CNhs10490.58-23B215.67
eyeball, adult.CNhs10484.31-12G44.63
eyeball, embryo E12.CNhs11016.345-16C62.47
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D44.22
eyeball, neonate N00.CNhs11207.633-15C64.83
eyeball, neonate N01.CNhs11140.1532-43E72.95
eyeball, neonate N02.CNhs11205.1551-44G85.06
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H23.78
forelimb, embryo E13.CNhs10589.384-1E24.93
forelimb, embryo E14.CNhs10577.413-26A83.07
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C46.97
forelimb, embryo E18.CNhs11008.1520-43B54.32
gonad, embryo E13.CNhs11044.1564-45I65.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E96.42
heart, embryo E12.CNhs11015.353-12F54.69
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D42.84
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C63.09
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G12.46
heart, neonate N16.CNhs11209.782-15G12.51
heart, neonate N20.CNhs11127.821-26I61.75
heart, neonate N25.CNhs11196.1351-25D32.42
heart, neonate N30.CNhs11202.1390-42D22.15
hippocampus, adult.CNhs10478.13-16E815.98
hippocampus, neonate N00.CNhs11228.627-43G111.63
intestinal mucosa, adult.CNhs10506.860-29I39.58
intestine, adult.CNhs10496.178-9A311.11
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D53.72
intestine, embryo E15.CNhs10602.976-16D85.54
intestine, embryo E16.CNhs10585.463-22H48.27
intestine, embryo E17.CNhs10582.482-18D35.56
intestine, embryo E18.CNhs10526.1289-20F75.71
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E93.13
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F26.57
intestine, neonate N10.CNhs11098.755-23A53.51
intestine, neonate N20.CNhs11187.827-18D18.99
intestine, neonate N25.CNhs11121.1352-25E34.11
intestine, neonate N30.CNhs11131.1384-42G15.18
kidney, embryo E14.CNhs10606.411-4I99.29
kidney, embryo E15.CNhs10997.434-16F88.34
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I27.94
kidney, embryo E18.CNhs11001.1288-20C77.95
kidney, neonate N00.CNhs11214.646-21G79.61
kidney, neonate N10.CNhs11206.758-6D58.79
kidney, neonate N20.CNhs11113.832-19I14.87
kidney, neonate N25.CNhs11122.1353-25F36.12
kidney, neonate N30.CNhs11203.1385-42H15.43
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F820.69
liver, embryo E13.CNhs10524.378-3H619.46
liver, embryo E14.CNhs10594.409-16E120.24
liver, embryo E15.CNhs10520.433-16D719.88
liver, embryo E16.CNhs10523.462-17F516.40
liver, embryo E17.CNhs10510.481-18A310.95
liver, embryo E18.CNhs10579.499-43G49.21
liver, neonate N00.CNhs11117.641-24F46.65
liver, neonate N03.CNhs11123.1345-25G26.31
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A32.53
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B17.21
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F83.42
lung, embryo E15.CNhs11020.432-17C53.06
lung, embryo E16.CNhs10998.458-17B63.52
lung, embryo E17.CNhs10605.480-44A65.70
lung, embryo E18.CNhs10583.1287-20I65.00
lung, neonate N00.CNhs11224.640-42C612.49
lung, neonate N06.CNhs11212.683-20E54.26
lung, neonate N07.CNhs11111.715-19A35.09
lung, neonate N10.CNhs11219.750-23E65.58
lung, neonate N20.CNhs11109.822-18A46.39
lung, neonate N25.CNhs11119.1359-25C74.84
lung, neonate N30.CNhs11133.1394-42H27.52
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A112.51
mammary gland, adult lactating day02.CNhs10480.595-22B67.87
mammary gland, adult pregnant day19.CNhs10476.588-5H28.00
medulla oblongata, adult.CNhs10477.17-12C29.15
medulla oblongata, neonate N30.CNhs11200.1396-42A315.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.89
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.12
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.36
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.29
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.43
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.53
olfactory brain, adult.CNhs10489.18-22I95.78
ovary, adult.CNhs10507.91-2I710.36
ovary, embryo E18.CNhs11040.505-44H76.41
ovary, neonate N00.CNhs11217.1299-22I47.33
oviduct, adult pregnant day01.CNhs10500.988-6G612.37
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F45.10
pancreas, embryo E15.CNhs11042.1556-45F26.35
pancreas, embryo E16.CNhs11003.460-26E55.28
pancreas, embryo E17.CNhs10599.1558-45G36.20
pancreas, embryo E18.CNhs10580.1535-43I76.76
pancreas, neonate N00.CNhs11105.645-26G94.13
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D89.63
pancreas, neonate N16.CNhs11136.787-43B64.11
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E63.78
pituitary gland, embryo E13.CNhs11009.370-44C74.79
pituitary gland, embryo E14.CNhs11037.398-44A54.93
pituitary gland, embryo E15.CNhs10592.427-16B93.90
pituitary gland, embryo E16.CNhs11036.449-43F67.13
pituitary gland, embryo E17.CNhs11039.1265-44F55.59
pituitary gland, neonate N00.CNhs11190.1308-22E911.57
placenta, adult pregnant day10.CNhs10472.539-13I74.46
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F815.44
skin, adult.CNhs10492.30-1C38.74
skin, neonate N00.CNhs11124.650-25G44.52
skin, neonate N03.CNhs11215.662-22H33.68
skin, neonate N06.CNhs11097.693-20I56.57
skin, neonate N10.CNhs11108.762-6C47.22
small intestine, neonate N16.CNhs11114.790-21I16.12
spinal cord, adult.CNhs10505.24-13C910.20
spleen, adult.CNhs10465.25-2G216.23
spleen, embryo E16.CNhs11035.461-43C14.75
spleen, embryo E18.CNhs11011.1271-21F26.48
spleen, neonate N10.CNhs11116.752-24D120.91
spleen, neonate N20.CNhs11112.824-19H116.40
spleen, neonate N25.CNhs11099.1354-25G316.93
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.61
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.86
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.84
stomach, adult.CNhs10503.33-1H69.55
stomach, embryo E12.CNhs10588.356-43E35.06
stomach, embryo E15.CNhs10603.1252-16G86.71
stomach, embryo E16.CNhs11022.459-17D46.48
stomach, embryo E17.CNhs11006.1035-18D55.85
stomach, embryo E18.CNhs10999.1286-20C64.80
stomach, neonate N03.CNhs11193.1340-24B87.96
stomach, neonate N07.CNhs11210.718-18A99.67
stomach, neonate N25.CNhs11104.1355-25E45.24
stomach, neonate N30.CNhs11134.1386-42I122.94
submandibular gland, adult.CNhs10469.59-29C111.81
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C52.48
testis, embryo E16.CNhs11033.470-26G59.33
testis, embryo E17.CNhs11029.486-18I56.46
testis, embryo E18.CNhs11027.503-18G56.76
testis, neonate N00.CNhs11189.1300-22B76.69
testis, neonate N07.CNhs11222.726-26I46.51
testis, neonate N10.CNhs11204.763-44D93.88
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B57.90
thymus, embryo E14.CNhs11041.402-44I425.34
thymus, embryo E15.CNhs11005.430-45I236.57
thymus, embryo E16.CNhs11002.456-26C532.61
thymus, embryo E17.CNhs10581.478-18C123.27
thymus, embryo E18.CNhs10595.1273-19G418.48
thymus, neonate N02.CNhs11181.1541-43F811.30
thymus, neonate N03.CNhs11137.2104-43C78.12
thymus, neonate N06.CNhs11197.681-26C410.80
thymus, neonate N07.CNhs11211.713-19D312.04
thymus, neonate N10.CNhs11194.748-24E49.18
thymus, neonate N20.CNhs11186.820-7A27.41
thymus, neonate N25.CNhs11125.1362-25G77.50
thymus, neonate N30.CNhs11132.1393-42G28.65
tongue, adult.CNhs10499.32-1B43.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.19
urinary bladder, adult.CNhs10481.879-12E422.99
uterus, adult pregnant day19.CNhs10497.590-15F57.69
uterus, adult.CNhs10509.92-27E532.97
vagina, adult.CNhs10502.89-27D518.44
vesicular gland, adult.CNhs10491.51-27F816.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.81
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.81
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.90
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.40
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.91
whole body, embryo E11.CNhs11014.324-5I82.70
whole body, embryo E12.CNhs10587.857-27C98.38
whole body, embryo E13.CNhs10512.372-23H26.15
whole body, embryo E14.5.CNhs10578.420-27D25.83
whole body, embryo E14.CNhs10519.395-14B17.55
whole body, embryo E16.CNhs10514.453-14F25.15
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.42
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.82
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.34
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.17
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.61
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.75
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.50
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.23
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.12
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.75
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.57
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.84
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.43
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.37
whole body, embryo E17.5.CNhs10513.490-9F95.98
whole body, embryo E17.CNhs10517.475-3I58.24
whole body, embryo E18.CNhs10516.493-3B35.38
whole body, neonate N00.CNhs10525.657-19C25.16
whole body, neonate N01.CNhs10576.659-23C67.84
whole body, neonate N06.CNhs10515.692-21D18.82
whole body, neonate N10.CNhs10518.761-6B48.58





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
organ system subdivision5.80e-10194
gray matter7.36e-0934
nervous system1.39e-0875
central nervous system4.69e-0873
regional part of nervous system7.47e-0854
neural tube1.43e-0752
neural rod1.43e-0752
future spinal cord1.43e-0752
neural keel1.43e-0752
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:105326649..105326742,-&oldid=3697913"