Personal tools

FFCP PHASE1:Mm9::chr19:28086084..28086124,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=19726|HGNC=|UniProt=P48381|association_with_transcript=-428bp_to_ENSMUST00000112613,ENSMUST00000173161,NM_011265,uc008hcb.2,uc008hcc.2,uc008hcd.2,uc008hce.2_5end|description=CAGE_peak_6_at_Rfx3_5end|id=chr19:28086084..28086124,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=1.28119077683835,1.39590163055744,1.36499771816861,3.32710632437513,5.00895729946347,2.85394762250213,1.16806320297763,1.93684985162364,2.111830832275,1.63845168425395,0.513653904676515,1.43589886191606,0.513602189793617,1.92324885321794,1.33243904726265,3.03712901084739,0,2.05050407482854,2.33094537129756,1.69755860719212,3.74190476664707,0.695036658406197,1.30599894569468,0.799962113967033,1.37645568640302,0.57423196411502,0.430761996159075,2.15471232685889,0.950117097281869,0.252030129759931,0.886922042621219,1.90509202037889,0.61506478758457,15.8481681015439,1.44425809875637,1.49611180822643,1.42918549383658,5.85944283031671,1.5626706890476,2.09409497589519,8.2352408324342,4.78131839470912,2.91306211818692,1.38486499773135,1.4192770370732,3.12029478674859,0.782391344348039,0.872100625521786,0.219686182734472,0.58328969722285,0.419959264876088,0,3.18786951509699,2.17608642603403,0.336093799142464,0.514518872071894,1.14613375975503,1.54701627683233,2.83243045203437,1.5869729378161,1.26766280701236,0.677689064138264,1.77858959222228,0,0.988866362566974,0.7104801149461,0.599200221036809,1.15265491596466,0.829516898467821,0.810035629990144,1.05162480675691,1.14260393761521,1.10434270475807,0.979926393719632,1.0543001812006,1.83843757322004,1.10115880999389,1.40456071893706,1.53606533256243,1.05509030184155,1.18933936683133,0,1.11673199600552,2.8138130501584,2.75036845998258,1.47314292736834,1.42371680799103,0.931997229126503,0.605809546665472,0.755715601067855,3.18850937571846,0.860423876981386,0.679971333707751,0,1.94932925234301,0.896053774194671,1.12355536105401,0.852151612890289,1.03914401841148,2.47337702157238,3.09855523508697,0,0,0,0.865964164044856,0.506719730950197,1.01104889002957,1.48439043634778,9.32176381129818,4.30482203287992,1.90833859442749,0.304465478312141,2.53677046981664,2.71300752994721,1.76383060703557,1.63366568728578,0.494389935468748,5.78397427679647,0.884610551949874,1.94120219936891,2.20841518460394,1.45462575940567,0,4.39171195517321,3.97948742945565,1.27728527604296,0.359445373517761,2.39961092397363,0.254140454146129,2.24685959107234,0.457500602818626,1.38219787324151,1.73824320192276,1.27857728665165,1.24672826735736,1.78465389374533,0.611036183101898,1.61729061793121,1.76905930903572,3.99839526184301,2.08192708740326,2.98872735763515,2.88099407688559,2.86339153887859,3.94611695077702,4.74020765053944,4.59138450342671,6.20888089773638,1.94011193639558,1.70195472151037,2.81521798662318,0.43839146485515,1.94633074457919,1.74126083261083,1.85203922767149,3.38358253591438,0,0,0.568326998791185,1.24275463521301,1.17263029990548,1.2604344302271,1.42046841351126,1.96764231747404,1.69693824176116,2.55787339225449,1.3413670069981,0.700592054203017,0.658239399653922,1.64167464079095,1.78351381000883,1.46199987425332,1.53685080703735,1.20785776884335,1.05144974282064,1.44066457330998,2.97376904685418,0.793351699990633,2.34617075588757,2.09013004674395,2.44848176511977,2.01683524623343,1.77902435075896,0.570676878337677,0,0.823494773620054,1.25667604400135,1.1937388322469,1.75467678407208,0.898819408654221,1.29682829924817,1.7922714592893,1.13800740571849,2.39921876480431,1.1270773567308,3.25842124552503,3.10323979468201,1.40271639780637,2.33975187359752,1.62371162777562,2.66897837330337,1.35736880313981,0.592905254174298,2.33583148002532,2.16214894624523,1.12431056192427,1.82574109249653,3.37648023653384,0.50925170356284,1.43848068725405,0.810676133875177,0.823684239564244,1.43768206527355,0.744281895337007,1.5601883655728,1.51547326768267,1.79397413521912,0.964887042726734,2.58654466233247,1.70542270593436,1.30371981153621,1.86719594352707,3.75504397261603,2.84760637651087,1.90434912708811,2.34160377429359,2.99506773801763,1.55025282754142,1.59454768657487,2.13022309130459,1.72684981865896,2.74833211304872,1.50791283939272,0,3.44234991113325,1.65562047782839,2.88991061978026,2.22702204525186,0.163934945376675,2.52470927204373,1.26203287766503,2.34263246577983,2.80050417052639,2.86762557543062,3.11918143715352,3.67999490025482,4.04810701674894,2.33804686329049,3.55759000151871,2.24924921495265,2.6968616189571,0.178065603667255,1.14020871547503,3.13443233647817,2.65490276679926,2.6705869977048,0.906970670894253,1.69744571780308,1.77181135728464,3.07435147943927,0.516856586336442,1.45413491791002,3.92147116223193,2.84433082142234,0,0,15.6602218646742,3.6012218806262,1.68166288917581,3.42939256050548,7.62563004661776,6.59964625127661,6.74650984468696,4.87143918583359,1.40803024838226,0.63549621259146,1.7642271844397,8.73897140589844,2.09903754704677,2.35220407219808,1.90995750405018,1.47726809770555,0.291480836629851,2.59595422814714,2.56306321196779,0.619160603889667,1.85194527369712,1.88368457004691,1.77702496037333,2.0590035588587,0.679913719975421,1.11961161858926,0.414599921413271,0.954670618015114,2.53068794864908,2.84647253977588,2.16010681643603,2.50905955217362,1.74690050996942,2.02296519577231,1.07449492442937,1.57053565190418,1.55537967950151,3.72803587852155,1.12738587736838,2.54178128274764,1.48912641411388,2.72231663681667,2.71235629303235,3.37912250981556,1.29092962510329,4.03633593016245,3.35549902162275,3.62376181239009,5.76060012515731,0.948033361884535,1.21635129174099,0.924398614483445,1.03936658382236,0.716106782669926,0.993406773906324,0.961563596159751,0.443068581523732,1.61546319917036,1.06689529317,1.10908803650525,0.779663045918019,1.05833025804362,1.75315353272353,2.94749498699775,1.33191572024439,1.07656627931371,1.17519231454855,1.9318959403219,1.68914227906064,2.56412273974171,1.50057865355346,1.00314420807073,1.6942555278512,1.38097570952153,2.86447756719698,0.859265911718438,0.685082519770642,2.2661816921691,0.675022500231806,0,1.81256963593682,2.5888015587591,3.00983307994112,7.58147259461959,2.73173769206615,2.67417388775123,1.46729213839588,1.2869045591501,3.11145418922261,3.29656091582231,4.1719497246936,4.80124702351215,3.29523089857312,2.07488975524684,3.46473577638565,3.13723246783859,3.10151532360312,3.81034953026459,2.20180219295225,3.47236596834669,2.47251540481984,2.35518272215036,2.05721551431249,3.37204031702741,3.09967046931517,2.47088908274958,1.78807822789128,3.63842813934209,2.92684756596436,2.63069711437843,2.71608227691724,3.92799590160417,2.37270036248348,2.1670986122624,2.04615521584845,2.47898945897546,2.70069255373598,1.74867404556562,1.63752125911786,0.859484216193193,1.53030665655075,2.42650561031467,1.85494268496337|short_description=p6@Rfx3}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:19726
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:P48381
|association_with_transcript=-428bp_to_ENSMUST00000112613,ENSMUST00000173161,NM_011265,uc008hcb.2,uc008hcc.2,uc008hcd.2,uc008hce.2_5end
|cluster_id=chr19:28086084..28086124,-
|description=CAGE_peak_6_at_Rfx3_5end
|id=chr19:28086084..28086124,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=1.28119077683835,1.39590163055744,1.36499771816861,3.32710632437513,5.00895729946347,2.85394762250213,1.16806320297763,1.93684985162364,2.111830832275,1.63845168425395,0.513653904676515,1.43589886191606,0.513602189793617,1.92324885321794,1.33243904726265,3.03712901084739,0,2.05050407482854,2.33094537129756,1.69755860719212,3.74190476664707,0.695036658406197,1.30599894569468,0.799962113967033,1.37645568640302,0.57423196411502,0.430761996159075,2.15471232685889,0.950117097281869,0.252030129759931,0.886922042621219,1.90509202037889,0.61506478758457,15.8481681015439,1.44425809875637,1.49611180822643,1.42918549383658,5.85944283031671,1.5626706890476,2.09409497589519,8.2352408324342,4.78131839470912,2.91306211818692,1.38486499773135,1.4192770370732,3.12029478674859,0.782391344348039,0.872100625521786,0.219686182734472,0.58328969722285,0.419959264876088,0,3.18786951509699,2.17608642603403,0.336093799142464,0.514518872071894,1.14613375975503,1.54701627683233,2.83243045203437,1.5869729378161,1.26766280701236,0.677689064138264,1.77858959222228,0,0.988866362566974,0.7104801149461,0.599200221036809,1.15265491596466,0.829516898467821,0.810035629990144,1.05162480675691,1.14260393761521,1.10434270475807,0.979926393719632,1.0543001812006,1.83843757322004,1.10115880999389,1.40456071893706,1.53606533256243,1.05509030184155,1.18933936683133,0,1.11673199600552,2.8138130501584,2.75036845998258,1.47314292736834,1.42371680799103,0.931997229126503,0.605809546665472,0.755715601067855,3.18850937571846,0.860423876981386,0.679971333707751,0,1.94932925234301,0.896053774194671,1.12355536105401,0.852151612890289,1.03914401841148,2.47337702157238,3.09855523508697,0,0,0,0.865964164044856,0.506719730950197,1.01104889002957,1.48439043634778,9.32176381129818,4.30482203287992,1.90833859442749,0.304465478312141,2.53677046981664,2.71300752994721,1.76383060703557,1.63366568728578,0.494389935468748,5.78397427679647,0.884610551949874,1.94120219936891,2.20841518460394,1.45462575940567,0,4.39171195517321,3.97948742945565,1.27728527604296,0.359445373517761,2.39961092397363,0.254140454146129,2.24685959107234,0.457500602818626,1.38219787324151,1.73824320192276,1.27857728665165,1.24672826735736,1.78465389374533,0.611036183101898,1.61729061793121,1.76905930903572,3.99839526184301,2.08192708740326,2.98872735763515,2.88099407688559,2.86339153887859,3.94611695077702,4.74020765053944,4.59138450342671,6.20888089773638,1.94011193639558,1.70195472151037,2.81521798662318,0.43839146485515,1.94633074457919,1.74126083261083,1.85203922767149,3.38358253591438,0,0,0.568326998791185,1.24275463521301,1.17263029990548,1.2604344302271,1.42046841351126,1.96764231747404,1.69693824176116,2.55787339225449,1.3413670069981,0.700592054203017,0.658239399653922,1.64167464079095,1.78351381000883,1.46199987425332,1.53685080703735,1.20785776884335,1.05144974282064,1.44066457330998,2.97376904685418,0.793351699990633,2.34617075588757,2.09013004674395,2.44848176511977,2.01683524623343,1.77902435075896,0.570676878337677,0,0.823494773620054,1.25667604400135,1.1937388322469,1.75467678407208,0.898819408654221,1.29682829924817,1.7922714592893,1.13800740571849,2.39921876480431,1.1270773567308,3.25842124552503,3.10323979468201,1.40271639780637,2.33975187359752,1.62371162777562,2.66897837330337,1.35736880313981,0.592905254174298,2.33583148002532,2.16214894624523,1.12431056192427,1.82574109249653,3.37648023653384,0.50925170356284,1.43848068725405,0.810676133875177,0.823684239564244,1.43768206527355,0.744281895337007,1.5601883655728,1.51547326768267,1.79397413521912,0.964887042726734,2.58654466233247,1.70542270593436,1.30371981153621,1.86719594352707,3.75504397261603,2.84760637651087,1.90434912708811,2.34160377429359,2.99506773801763,1.55025282754142,1.59454768657487,2.13022309130459,1.72684981865896,2.74833211304872,1.50791283939272,0,3.44234991113325,1.65562047782839,2.88991061978026,2.22702204525186,0.163934945376675,2.52470927204373,1.26203287766503,2.34263246577983,2.80050417052639,2.86762557543062,3.11918143715352,3.67999490025482,4.04810701674894,2.33804686329049,3.55759000151871,2.24924921495265,2.6968616189571,0.178065603667255,1.14020871547503,3.13443233647817,2.65490276679926,2.6705869977048,0.906970670894253,1.69744571780308,1.77181135728464,3.07435147943927,0.516856586336442,1.45413491791002,3.92147116223193,2.84433082142234,0,0,15.6602218646742,3.6012218806262,1.68166288917581,3.42939256050548,7.62563004661776,6.59964625127661,6.74650984468696,4.87143918583359,1.40803024838226,0.63549621259146,1.7642271844397,8.73897140589844,2.09903754704677,2.35220407219808,1.90995750405018,1.47726809770555,0.291480836629851,2.59595422814714,2.56306321196779,0.619160603889667,1.85194527369712,1.88368457004691,1.77702496037333,2.0590035588587,0.679913719975421,1.11961161858926,0.414599921413271,0.954670618015114,2.53068794864908,2.84647253977588,2.16010681643603,2.50905955217362,1.74690050996942,2.02296519577231,1.07449492442937,1.57053565190418,1.55537967950151,3.72803587852155,1.12738587736838,2.54178128274764,1.48912641411388,2.72231663681667,2.71235629303235,3.37912250981556,1.29092962510329,4.03633593016245,3.35549902162275,3.62376181239009,5.76060012515731,0.948033361884535,1.21635129174099,0.924398614483445,1.03936658382236,0.716106782669926,0.993406773906324,0.961563596159751,0.443068581523732,1.61546319917036,1.06689529317,1.10908803650525,0.779663045918019,1.05833025804362,1.75315353272353,2.94749498699775,1.33191572024439,1.07656627931371,1.17519231454855,1.9318959403219,1.68914227906064,2.56412273974171,1.50057865355346,1.00314420807073,1.6942555278512,1.38097570952153,2.86447756719698,0.859265911718438,0.685082519770642,2.2661816921691,0.675022500231806,0,1.81256963593682,2.5888015587591,3.00983307994112,7.58147259461959,2.73173769206615,2.67417388775123,1.46729213839588,1.2869045591501,3.11145418922261,3.29656091582231,4.1719497246936,4.80124702351215,3.29523089857312,2.07488975524684,3.46473577638565,3.13723246783859,3.10151532360312,3.81034953026459,2.20180219295225,3.47236596834669,2.47251540481984,2.35518272215036,2.05721551431249,3.37204031702741,3.09967046931517,2.47088908274958,1.78807822789128,3.63842813934209,2.92684756596436,2.63069711437843,2.71608227691724,3.92799590160417,2.37270036248348,2.1670986122624,2.04615521584845,2.47898945897546,2.70069255373598,1.74867404556562,1.63752125911786,0.859484216193193,1.53030665655075,2.42650561031467,1.85494268496337
|short_description=p6@Rfx3
}}

Revision as of 20:17, 3 August 2015

Short description:p6@Rfx3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Rfx3_5end
Coexpression cluster:NA
Association with transcript: -428bp_to_ENSMUST00000112613, ENSMUST00000173161, NM_011265, uc008hcb.2, uc008hcc.2, uc008hcd.2, uc008hce.2_5end
EntrezGene:19726
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Rfx3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.44
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.92
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.33
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I22.15
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.42
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.12
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.19
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.19
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.10
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H99.32
adrenal gland, adult.CNhs10508.49-24D74.30
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F52.71
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H15.78
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.39
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D51.74
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G44.00
eyeball, embryo E12.CNhs11016.345-16C62.08
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C63.95
eyeball, neonate N01.CNhs11140.1532-43E74.74
eyeball, neonate N02.CNhs11205.1551-44G84.59
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E22.82
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I63.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E52.56
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G11.78
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D82.45
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F82.40
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C73.10
kidney, neonate N00.CNhs11214.646-21G71.40
kidney, neonate N10.CNhs11206.758-6D52.34
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F32.67
kidney, neonate N30.CNhs11203.1385-42H11.36
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F82.34
liver, embryo E13.CNhs10524.378-3H62.16
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F53.38
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H11.79
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B12.59
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B63.76
lung, embryo E17.CNhs10605.480-44A62.85
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E53.00
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H22.75
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C22.89
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.87
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I72.70
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G63.13
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D83.92
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G815.66
pituitary gland, embryo E12.CNhs11018.346-16E63.60
pituitary gland, embryo E13.CNhs11009.370-44C71.68
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B97.63
pituitary gland, embryo E16.CNhs11036.449-43F66.60
pituitary gland, embryo E17.CNhs11039.1265-44F56.75
pituitary gland, neonate N00.CNhs11190.1308-22E94.87
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C38.74
skin, neonate N00.CNhs11124.650-25G42.10
skin, neonate N03.CNhs11215.662-22H32.35
skin, neonate N06.CNhs11097.693-20I51.91
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G22.56
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F21.85
spleen, neonate N10.CNhs11116.752-24D11.88
spleen, neonate N20.CNhs11112.824-19H11.78
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.53
stomach, embryo E15.CNhs10603.1252-16G82.85
stomach, embryo E16.CNhs11022.459-17D42.16
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B82.02
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I11.56
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F52.54
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G52.72
testis, embryo E17.CNhs11029.486-18I52.71
testis, embryo E18.CNhs11027.503-18G53.38
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I44.04
testis, neonate N10.CNhs11204.763-44D93.36
testis, neonate N20.CNhs11110.839-18H33.62
testis, neonate N30.CNhs11130.1391-42E25.76
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.96
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C41.62
thymus, neonate N07.CNhs11211.713-19D31.07
thymus, neonate N10.CNhs11194.748-24E41.11
thymus, neonate N20.CNhs11186.820-7A20.78
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G21.75
tongue, adult.CNhs10499.32-1B42.95
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.08
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E41.93
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E52.56
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I83.01
whole body, embryo E12.CNhs10587.857-27C97.58
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.14
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.64
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:28086084..28086124,-&oldid=3698270"