FFCP PHASE1:Mm9::chr13:97312389..97312400,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=27015|HGNC=|MCL_coexpression_id=0|UniProt=Q9QUG2,E9QMR6,Q5Q9H4|association_with_transcript=39bp_to_ENSMUST00000022172,ENSMUST00000109449,NM_012048,uc007rne.1,uc007rng.1,uc007rnh.1_5end|description=CAGE_peak_5_at_Polk_5end|id=chr13:97312389..97312400,-|ontology_enrichment_celltype=CL:0000107!3.38e-08!9|ontology_enrichment_celltype_v019_2=CL:0000107,1.55e-17,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002342!1.56e-08!10;UBERON:0005062!1.56e-08!10;UBERON:0002410!3.38e-08!9|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.55e-17,9;UBERON:0000010,1.97e-14,11;UBERON:0000013,7.72e-14,3;UBERON:0010313,7.72e-14,3;UBERON:0002342,7.72e-14,3;UBERON:0002005,7.72e-14,3;UBERON:0005428,7.72e-14,3;UBERON:0005062,7.72e-14,3|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0.140788722151667,0,0.171217968225505,0.0797721589953364,0,0,0,0,0,0.315462165358238,0,0,1.36069264241712,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0.0958454710182364,0,0,0,0.46081959976873,0,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.30559649555362,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0.70667914902068,0,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.346970653532272,1.52232739156071,0.461230994512117,0.753613202763113,0.705532242814229,0.251333182659351,0.247194967734374,0,0,0.161766849947409,0,0.484875253135222,0,0,0.209446706813455,0,0.11981512450592,0,0.254140454146129,0,0,0.125654352112864,0,0,0.20778804455956,0.324482526135515,0.305518091550949,0.248813941220186,0,0,0,0,0,0.30140963567143,0,0.12811372028485,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0.350296027101508,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0,0,0,0.312037673114561,0.252578877947112,0,0,1.29327233116623,0.189491411770485,0,0,0,0.167506257441816,0.238043640886014,0,0.630540576424764,0,0.478364305972461,0,0.172684981865896,0.144649058581512,0,0,0,0,0.321101179975584,0,0,0,1.26203287766503,0.390438744296638,1.72338718186239,0.477937595905104,0.445597348164788,0.283076530788832,1.21443210502468,0.584511715822624,1.97643888973262,0,0.283880170416537,0.178065603667255,0,0.329940245945071,0,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0.301564624640779,0,0,0,0,0.170870880797853,0,0,0.376736914009382,0,0.228778173206523,0.169978429993855,0.279902904647316,0,0,0,0,0,0.209088296014469,0,0,0.495920734352016,0,0.129614973291793,0,5.07323644815771,0.299033092087958,0,0,0.129159823477731,0.506868376472335,0.469428954583016,0.2604087696879,0.629156066554265,0.724752362478018,5.47257011889944,0,0,0,0.129920822977795,0,0.198681354781265,0.120195449519969,0.147689527174577,0.302899349844443,0.228620419965,0.302478555410522,0.194915761479505,0.0962118416403295,0.701261413089414,0,0.665957860122194,0.538283139656854,0.839423081820392,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.715308569841963,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0,0.197008964751127,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p5@Polk}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:27015 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9QUG2,uniprot:E9QMR6,uniprot:Q5Q9H4 | |||
|association_with_transcript=39bp_to_ENSMUST00000022172,ENSMUST00000109449,NM_012048,uc007rne.1,uc007rng.1,uc007rnh.1_5end | |||
|cluster_id=chr13:97312389..97312400,- | |||
|description=CAGE_peak_5_at_Polk_5end | |||
|id=chr13:97312389..97312400,- | |||
|ontology_enrichment_celltype=CL:0000107!3.38e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.55e-17,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002342!1.56e-08!10;UBERON:0005062!1.56e-08!10;UBERON:0002410!3.38e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.55e-17,9;UBERON:0000010,1.97e-14,11;UBERON:0000013,7.72e-14,3;UBERON:0010313,7.72e-14,3;UBERON:0002342,7.72e-14,3;UBERON:0002005,7.72e-14,3;UBERON:0005428,7.72e-14,3;UBERON:0005062,7.72e-14,3 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0.140788722151667,0,0.171217968225505,0.0797721589953364,0,0,0,0,0,0.315462165358238,0,0,1.36069264241712,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0.0958454710182364,0,0,0,0.46081959976873,0,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.30559649555362,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0.70667914902068,0,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.346970653532272,1.52232739156071,0.461230994512117,0.753613202763113,0.705532242814229,0.251333182659351,0.247194967734374,0,0,0.161766849947409,0,0.484875253135222,0,0,0.209446706813455,0,0.11981512450592,0,0.254140454146129,0,0,0.125654352112864,0,0,0.20778804455956,0.324482526135515,0.305518091550949,0.248813941220186,0,0,0,0,0,0.30140963567143,0,0.12811372028485,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0.350296027101508,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0,0,0,0.312037673114561,0.252578877947112,0,0,1.29327233116623,0.189491411770485,0,0,0,0.167506257441816,0.238043640886014,0,0.630540576424764,0,0.478364305972461,0,0.172684981865896,0.144649058581512,0,0,0,0,0.321101179975584,0,0,0,1.26203287766503,0.390438744296638,1.72338718186239,0.477937595905104,0.445597348164788,0.283076530788832,1.21443210502468,0.584511715822624,1.97643888973262,0,0.283880170416537,0.178065603667255,0,0.329940245945071,0,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0.301564624640779,0,0,0,0,0.170870880797853,0,0,0.376736914009382,0,0.228778173206523,0.169978429993855,0.279902904647316,0,0,0,0,0,0.209088296014469,0,0,0.495920734352016,0,0.129614973291793,0,5.07323644815771,0.299033092087958,0,0,0.129159823477731,0.506868376472335,0.469428954583016,0.2604087696879,0.629156066554265,0.724752362478018,5.47257011889944,0,0,0,0.129920822977795,0,0.198681354781265,0.120195449519969,0.147689527174577,0.302899349844443,0.228620419965,0.302478555410522,0.194915761479505,0.0962118416403295,0.701261413089414,0,0.665957860122194,0.538283139656854,0.839423081820392,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.715308569841963,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0,0.197008964751127,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p5@Polk | |||
}} |
Revision as of 20:27, 3 August 2015
Short description: | p5@Polk |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Polk_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 39bp_to_ENSMUST00000022172, ENSMUST00000109449, NM_012048, uc007rne.1, uc007rng.1, uc007rnh.1_5end |
EntrezGene: | 27015 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.55e-17 | 9 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 1.55e-17 | 9 |
peripheral nervous system | 1.97e-14 | 11 |
sympathetic nervous system | 7.72e-14 | 3 |
neural crest-derived structure | 7.72e-14 | 3 |
neural crest | 7.72e-14 | 3 |
enteric nervous system | 7.72e-14 | 3 |
vagal neural crest | 7.72e-14 | 3 |
neural fold | 7.72e-14 | 3 |