FFCP PHASE1:Mm9::chr13:98517328..98517339,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:98517328..98517339,-
|short_description=p1@ENSMUST00000123535
|description=CAGE_peak_1_at_ENSMUST00000123535_5end
|association_with_transcript=0bp_to_ENSM...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=248 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000123535_5end | |||
|cluster_id=chr13:98517328..98517339,- | |||
|description=CAGE_peak_1_at_ENSMUST00000123535_5end | |||
|id=chr13:98517328..98517339,- | |||
|ontology_enrichment_celltype=CL:0002609!1.57e-07!6;CL:0002613!6.35e-07!3;CL:0000117!9.41e-07!23;CL:0000337!9.41e-07!23 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!2.95e-25!39;UBERON:0001890!2.95e-25!39;UBERON:0006240!2.95e-25!39;UBERON:0003080!1.43e-24!40;UBERON:0002616!1.20e-19!49;UBERON:0003056!1.20e-19!49;UBERON:0000955!3.30e-19!50;UBERON:0006238!3.30e-19!50;UBERON:0001049!2.21e-18!52;UBERON:0005068!2.21e-18!52;UBERON:0006241!2.21e-18!52;UBERON:0007135!2.21e-18!52;UBERON:0000007!1.19e-15!8;UBERON:0003296!1.19e-15!8;UBERON:0010133!1.19e-15!8;UBERON:0000033!9.02e-15!63;UBERON:0002791!1.45e-14!29;UBERON:0003528!1.45e-14!29;UBERON:0001893!1.45e-14!29;UBERON:0001017!2.60e-14!73;UBERON:0005743!2.60e-14!73;UBERON:0000073!7.28e-14!75;UBERON:0001016!7.28e-14!75;UBERON:0000956!2.75e-13!21;UBERON:0001869!2.75e-13!21;UBERON:0000203!2.75e-13!21;UBERON:0002346!7.64e-13!71;UBERON:0003075!7.64e-13!71;UBERON:0007284!7.64e-13!71;UBERON:0001894!1.73e-12!10;UBERON:0006222!1.73e-12!10;UBERON:0002020!3.26e-12!34;UBERON:0007811!3.46e-10!86;UBERON:0004121!1.56e-09!102;UBERON:0000924!1.56e-09!102;UBERON:0006601!1.56e-09!102;UBERON:0000153!4.08e-09!94;UBERON:0002021!8.49e-08!10;UBERON:0000411!8.49e-08!10;UBERON:0001950!8.49e-08!10;UBERON:0000025!4.37e-07!114;UBERON:0002619!8.23e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.66e-54,8;UBERON:0003296,1.66e-54,8;UBERON:0010133,1.66e-54,8;UBERON:0001894,8.43e-44,10;UBERON:0006222,8.43e-44,10;UBERON:0002780,8.52e-12,39;UBERON:0001890,8.52e-12,39;UBERON:0006240,8.52e-12,39;UBERON:0003080,1.62e-11,40;UBERON:0002616,4.29e-10,46;UBERON:0000955,6.83e-10,47;UBERON:0006238,6.83e-10,47;UBERON:0003056,1.64e-09,49;UBERON:0001049,5.37e-09,52;UBERON:0005068,5.37e-09,52;UBERON:0006241,5.37e-09,52;UBERON:0007135,5.37e-09,52;UBERON:0000073,1.10e-08,54;UBERON:0002368,7.20e-08,60;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64;UBERON:0002530,2.65e-07,65 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.414758449233911,0,0.210324961351382,0,0,0.244981598429908,0,0,0,0,0,0.263772575460388,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.83011093233712,0,0,0,10.2857335512519,10.3453914209201,5.75921572107423,2.43571959291679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.171853182343688,0,0.755393897389701,0,0,0.453142408984205,0,0,0,0.341467211508268,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.414758449233911,0,0.210324961351382,0,0,0.244981598429908,0,0,0,0,0,0.263772575460388,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.83011093233712,0,0,0,10.2857335512519,10.3453914209201,5.75921572107423,2.43571959291679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.171853182343688,0,0.755393897389701,0,0,0.453142408984205,0,0,0,0.341467211508268,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENSMUST00000123535 | |||
}} | }} |
Latest revision as of 20:56, 3 August 2015
Short description: | p1@ENSMUST00000123535 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000123535_5end |
Coexpression cluster: | MCL_coexpression_mm9:248 |
Association with transcript: | 0bp_to_ENSMUST00000123535_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.66e-54 | 8 |
gland of diencephalon | 1.66e-54 | 8 |
neuroendocrine gland | 1.66e-54 | 8 |
diencephalon | 8.43e-44 | 10 |
future diencephalon | 8.43e-44 | 10 |
regional part of forebrain | 8.52e-12 | 39 |
forebrain | 8.52e-12 | 39 |
future forebrain | 8.52e-12 | 39 |
anterior neural tube | 1.62e-11 | 40 |
regional part of brain | 4.29e-10 | 46 |
brain | 6.83e-10 | 47 |
future brain | 6.83e-10 | 47 |
pre-chordal neural plate | 1.64e-09 | 49 |
neural tube | 5.37e-09 | 52 |
neural rod | 5.37e-09 | 52 |
future spinal cord | 5.37e-09 | 52 |
neural keel | 5.37e-09 | 52 |
regional part of nervous system | 1.10e-08 | 54 |
endocrine gland | 7.20e-08 | 60 |
neurectoderm | 2.08e-07 | 64 |
neural plate | 2.08e-07 | 64 |
presumptive neural plate | 2.08e-07 | 64 |
gland | 2.65e-07 | 65 |