FFCP PHASE1:Mm9::chr3:57245290..57245293,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1792 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:57245290..57245293,+ | |||
|description=CAGE_peak_at_chr3:57245290..57245293,+ | |description=CAGE_peak_at_chr3:57245290..57245293,+ | ||
|id=chr3:57245290..57245293,+ | |id=chr3:57245290..57245293,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.42e-13!25;CL:0000223!2.41e-10!20;CL:0002563!4.01e-10!9;CL:0002251!4.01e-10!9;CL:0000239!1.16e-08!6;CL:0000677!1.16e-08!6;CL:0000212!1.16e-08!6;CL:0000584!1.16e-08!6;CL:0000473!1.23e-07!3;CL:0000627!1.23e-07!3;CL:0000682!1.23e-07!3;CL:0000075!2.29e-07!7;CL:0000181!3.50e-07!5;CL:0000417!3.50e-07!5;CL:0000668!3.50e-07!5;CL:0000412!3.50e-07!5;CL:0000182!3.50e-07!5 | |ontology_enrichment_celltype=CL:0000066!1.42e-13!25;CL:0000223!2.41e-10!20;CL:0002563!4.01e-10!9;CL:0002251!4.01e-10!9;CL:0000239!1.16e-08!6;CL:0000677!1.16e-08!6;CL:0000212!1.16e-08!6;CL:0000584!1.16e-08!6;CL:0000473!1.23e-07!3;CL:0000627!1.23e-07!3;CL:0000682!1.23e-07!3;CL:0000075!2.29e-07!7;CL:0000181!3.50e-07!5;CL:0000417!3.50e-07!5;CL:0000668!3.50e-07!5;CL:0000412!3.50e-07!5;CL:0000182!3.50e-07!5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,6.83e-10,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.62e-22!15;UBERON:0000160!2.09e-20!43;UBERON:0001242!1.49e-17!13;UBERON:0000060!1.49e-17!13;UBERON:0001262!1.49e-17!13;UBERON:0004786!1.49e-17!13;UBERON:0001007!4.92e-16!128;UBERON:0001555!4.92e-16!128;UBERON:0007026!4.92e-16!128;UBERON:0004119!1.18e-15!130;UBERON:0000925!1.18e-15!130;UBERON:0006595!1.18e-15!130;UBERON:0005409!1.10e-14!59;UBERON:0004921!7.72e-14!126;UBERON:0004185!7.72e-14!126;UBERON:0004923!1.77e-12!24;UBERON:0002108!1.89e-11!16;UBERON:0002107!1.94e-11!22;UBERON:0007499!1.94e-11!22;UBERON:0006925!1.94e-11!22;UBERON:0009497!1.94e-11!22;UBERON:0000015!1.94e-11!22;UBERON:0002423!1.94e-11!22;UBERON:0006235!1.94e-11!22;UBERON:0008835!1.94e-11!22;UBERON:0003894!1.94e-11!22;UBERON:0004161!1.94e-11!22;UBERON:0008836!1.94e-11!22;UBERON:0009854!8.01e-11!23;UBERON:0009856!8.01e-11!23;UBERON:0003350!4.01e-10!9;UBERON:0004808!4.01e-10!9;UBERON:0001277!4.01e-10!9;UBERON:0002365!9.63e-10!25;UBERON:0002330!9.63e-10!25;UBERON:0003929!3.50e-09!55;UBERON:0000485!4.28e-08!11;UBERON:0000331!1.17e-07!3;UBERON:0002116!1.17e-07!3;UBERON:0001204!1.17e-07!3;UBERON:0001168!1.17e-07!3;UBERON:0000490!6.27e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,2.51e-15,2;UBERON:0001961,2.51e-15,2;UBERON:0001744,2.51e-15,2;UBERON:0000344,1.51e-11,15;UBERON:0002465,1.58e-10,3;UBERON:0000331,8.39e-10,3;UBERON:0002116,8.39e-10,3;UBERON:0001204,8.39e-10,3;UBERON:0001168,8.39e-10,3;UBERON:0003199,1.56e-08,1;UBERON:0002108,1.43e-07,4;UBERON:0004923,3.42e-07,24 | |||
|phase1_expression=0,0.348975407639361,1.81999695755814,0,0.500895729946347,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.15980299262857,6.65286915094793,1.72269589234506,0.86152399231815,1.29282739611533,0.950117097281869,1.00812051903972,1.77384408524244,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0.860423876981386,1.3599426674155,0,0.649776417447669,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0.949058123089023,0.329397909448022,0,0,0,1.79763881730844,0.216138049874694,1.1948476395262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0.823684239564244,1.43768206527355,0,0.624075346229121,0.252578877947112,0.179397413521912,1.92977408545347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0.302323556964751,0,0,0.614870295887855,0,0.363533729477506,0.712994756769443,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,1.81999695755814,0,0.500895729946347,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.15980299262857,6.65286915094793,1.72269589234506,0.86152399231815,1.29282739611533,0.950117097281869,1.00812051903972,1.77384408524244,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0.860423876981386,1.3599426674155,0,0.649776417447669,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0.949058123089023,0.329397909448022,0,0,0,1.79763881730844,0.216138049874694,1.1948476395262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0.823684239564244,1.43768206527355,0,0.624075346229121,0.252578877947112,0.179397413521912,1.92977408545347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0.302323556964751,0,0,0.614870295887855,0,0.363533729477506,0.712994756769443,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:57245290..57245293,+ | |short_description=p@chr3:57245290..57245293,+ | ||
}} | }} |
Latest revision as of 21:27, 3 August 2015
Short description: | p@chr3:57245290..57245293, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:57245290..57245293, + |
Coexpression cluster: | MCL_coexpression_mm9:1792 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 6.83e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 2.51e-15 | 2 |
mucosa-associated lymphoid tissue | 2.51e-15 | 2 |
lymphoid tissue | 2.51e-15 | 2 |
mucosa | 1.51e-11 | 15 |
lymphoid system | 1.58e-10 | 3 |
ileal mucosa | 8.39e-10 | 3 |
ileum | 8.39e-10 | 3 |
mucosa of small intestine | 8.39e-10 | 3 |
wall of small intestine | 8.39e-10 | 3 |
egg chamber | 1.56e-08 | 1 |
small intestine | 1.43e-07 | 4 |
organ component layer | 3.42e-07 | 24 |