FFCP PHASE1:Mm9::chr16:78268076..78268083,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=88 | |MCL_coexpression_id=88 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:78268076..78268083,- | |||
|description=CAGE_peak_at_chr16:78268076..78268083,- | |description=CAGE_peak_at_chr16:78268076..78268083,- | ||
|id=chr16:78268076..78268083,- | |id=chr16:78268076..78268083,- | ||
|ontology_enrichment_celltype=CL:0002563!3.14e-28!9;CL:0002251!3.14e-28!9;CL:0000239!8.01e-20!6;CL:0000677!8.01e-20!6;CL:0000212!8.01e-20!6;CL:0000584!8.01e-20!6;CL:0000066!2.05e-19!25;CL:0000075!6.80e-17!7;CL:0002076!2.79e-16!15;CL:0000223!2.17e-14!20;CL:0000473!1.37e-10!3;CL:0000627!1.37e-10!3;CL:0000682!1.37e-10!3;CL:0002250!5.65e-10!3 | |ontology_enrichment_celltype=CL:0002563!3.14e-28!9;CL:0002251!3.14e-28!9;CL:0000239!8.01e-20!6;CL:0000677!8.01e-20!6;CL:0000212!8.01e-20!6;CL:0000584!8.01e-20!6;CL:0000066!2.05e-19!25;CL:0000075!6.80e-17!7;CL:0002076!2.79e-16!15;CL:0000223!2.17e-14!20;CL:0000473!1.37e-10!3;CL:0000627!1.37e-10!3;CL:0000682!1.37e-10!3;CL:0002250!5.65e-10!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.17e-51,9;CL:0002251,1.17e-51,9;CL:0000239,1.42e-44,6;CL:0000677,1.42e-44,6;CL:0000584,1.42e-44,6;CL:0000075,3.29e-38,7;CL:0000066,9.03e-35,25;CL:0002076,7.45e-31,15;CL:0000223,4.95e-23,20;CL:0000682,9.32e-23,3;CL:0002250,2.21e-10,3;CL:0000473,4.03e-10,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.45e-38!15;UBERON:0001242!3.64e-33!13;UBERON:0000060!3.64e-33!13;UBERON:0001262!3.64e-33!13;UBERON:0004786!3.64e-33!13;UBERON:0003350!3.14e-28!9;UBERON:0004808!3.14e-28!9;UBERON:0001277!3.14e-28!9;UBERON:0000160!2.62e-27!43;UBERON:0000485!8.44e-23!11;UBERON:0004923!9.22e-23!24;UBERON:0005409!1.05e-20!59;UBERON:0001007!6.25e-10!128;UBERON:0001555!6.25e-10!128;UBERON:0007026!6.25e-10!128;UBERON:0004119!1.06e-09!130;UBERON:0000925!1.06e-09!130;UBERON:0006595!1.06e-09!130;UBERON:0000331!2.22e-09!3;UBERON:0002116!2.22e-09!3;UBERON:0001204!2.22e-09!3;UBERON:0001168!2.22e-09!3;UBERON:0004921!3.52e-08!126;UBERON:0004185!3.52e-08!126;UBERON:0001155!4.79e-07!2;UBERON:0000059!4.79e-07!2 | |ontology_enrichment_uberon=UBERON:0000344!3.45e-38!15;UBERON:0001242!3.64e-33!13;UBERON:0000060!3.64e-33!13;UBERON:0001262!3.64e-33!13;UBERON:0004786!3.64e-33!13;UBERON:0003350!3.14e-28!9;UBERON:0004808!3.14e-28!9;UBERON:0001277!3.14e-28!9;UBERON:0000160!2.62e-27!43;UBERON:0000485!8.44e-23!11;UBERON:0004923!9.22e-23!24;UBERON:0005409!1.05e-20!59;UBERON:0001007!6.25e-10!128;UBERON:0001555!6.25e-10!128;UBERON:0007026!6.25e-10!128;UBERON:0004119!1.06e-09!130;UBERON:0000925!1.06e-09!130;UBERON:0006595!1.06e-09!130;UBERON:0000331!2.22e-09!3;UBERON:0002116!2.22e-09!3;UBERON:0001204!2.22e-09!3;UBERON:0001168!2.22e-09!3;UBERON:0004921!3.52e-08!126;UBERON:0004185!3.52e-08!126;UBERON:0001155!4.79e-07!2;UBERON:0000059!4.79e-07!2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.17e-51,9;UBERON:0004808,1.17e-51,9;UBERON:0001277,1.17e-51,9;UBERON:0000485,3.29e-42,11;UBERON:0001242,1.16e-35,13;UBERON:0001262,1.16e-35,13;UBERON:0004786,1.16e-35,13;UBERON:0000344,7.45e-31,15;UBERON:0004923,4.12e-19,24;UBERON:0000160,1.88e-18,31;UBERON:0005409,6.27e-12,47;UBERON:0001153,2.89e-08,1;UBERON:0001045,2.89e-08,1;UBERON:0003929,5.41e-08,55 | |||
|phase1_expression=0,12.563114675017,19.1099680543605,16.6355316218757,33.5600139064053,6.04365378882803,6.07392865548367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.45881856213434,12.0588712464154,9.04600191934057,7.11055067863434,0.950117097281869,0.756090389279792,0.221730510655305,0,0,0,2.02196133825892,0.831173226792462,3.87921776898501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0.898819408654221,0.864552199498777,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,12.563114675017,19.1099680543605,16.6355316218757,33.5600139064053,6.04365378882803,6.07392865548367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.45881856213434,12.0588712464154,9.04600191934057,7.11055067863434,0.950117097281869,0.756090389279792,0.221730510655305,0,0,0,2.02196133825892,0.831173226792462,3.87921776898501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0.898819408654221,0.864552199498777,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:78268076..78268083,- | |short_description=p@chr16:78268076..78268083,- | ||
}} | }} |
Latest revision as of 02:24, 4 August 2015
Short description: | p@chr16:78268076..78268083, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:78268076..78268083, - |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.17e-51 | 9 |
epithelial cell of alimentary canal | 1.17e-51 | 9 |
brush border epithelial cell | 1.42e-44 | 6 |
gut absorptive cell | 1.42e-44 | 6 |
enterocyte | 1.42e-44 | 6 |
columnar/cuboidal epithelial cell | 3.29e-38 | 7 |
epithelial cell | 9.03e-35 | 25 |
endo-epithelial cell | 7.45e-31 | 15 |
endodermal cell | 4.95e-23 | 20 |
M cell of gut | 9.32e-23 | 3 |
intestinal crypt stem cell | 2.21e-10 | 3 |
defensive cell | 4.03e-10 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.17e-51 | 9 |
gastrointestinal system epithelium | 1.17e-51 | 9 |
intestinal epithelium | 1.17e-51 | 9 |
simple columnar epithelium | 3.29e-42 | 11 |
intestinal mucosa | 1.16e-35 | 13 |
wall of intestine | 1.16e-35 | 13 |
gastrointestinal system mucosa | 1.16e-35 | 13 |
mucosa | 7.45e-31 | 15 |
organ component layer | 4.12e-19 | 24 |
intestine | 1.88e-18 | 31 |
gastrointestinal system | 6.27e-12 | 47 |
caecum | 2.89e-08 | 1 |
midgut | 2.89e-08 | 1 |
gut epithelium | 5.41e-08 | 55 |