FFCP PHASE1:Mm9::chr2:132618345..132618358,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=535 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:132618345..132618358,- | |||
|description=CAGE_peak_at_chr2:132618345..132618358,- | |description=CAGE_peak_at_chr2:132618345..132618358,- | ||
|id=chr2:132618345..132618358,- | |id=chr2:132618345..132618358,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.86e-19!71;UBERON:0003075!1.86e-19!71;UBERON:0007284!1.86e-19!71;UBERON:0002616!7.65e-17!49;UBERON:0000955!2.60e-16!50;UBERON:0006238!2.60e-16!50;UBERON:0001049!4.40e-15!52;UBERON:0005068!4.40e-15!52;UBERON:0006241!4.40e-15!52;UBERON:0007135!4.40e-15!52;UBERON:0000033!1.03e-14!63;UBERON:0003056!4.54e-13!49;UBERON:0003080!5.20e-13!40;UBERON:0004121!1.60e-12!102;UBERON:0000924!1.60e-12!102;UBERON:0006601!1.60e-12!102;UBERON:0002780!2.65e-12!39;UBERON:0001890!2.65e-12!39;UBERON:0006240!2.65e-12!39;UBERON:0001017!7.07e-11!73;UBERON:0005743!7.07e-11!73;UBERON:0000073!2.50e-10!75;UBERON:0001016!2.50e-10!75;UBERON:0002020!3.64e-08!34;UBERON:0007811!3.86e-08!86;UBERON:0002791!5.19e-08!29;UBERON:0003528!5.19e-08!29;UBERON:0001893!5.19e-08!29;UBERON:0002021!7.25e-08!10;UBERON:0000411!7.25e-08!10;UBERON:0001950!7.25e-08!10;UBERON:0002369!1.23e-07!7;UBERON:0006858!1.23e-07!7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,2.36e-15,7;UBERON:0006858,2.36e-15,7;UBERON:0002616,1.25e-12,46;UBERON:0000955,2.60e-12,47;UBERON:0006238,2.60e-12,47;UBERON:0000073,2.88e-12,54;UBERON:0010314,1.61e-11,92;UBERON:0001049,6.53e-11,52;UBERON:0005068,6.53e-11,52;UBERON:0006241,6.53e-11,52;UBERON:0007135,6.53e-11,52;UBERON:0002780,6.69e-11,39;UBERON:0001890,6.69e-11,39;UBERON:0006240,6.69e-11,39;UBERON:0003080,1.39e-10,40;UBERON:0002346,1.92e-08,64;UBERON:0003075,1.92e-08,64;UBERON:0007284,1.92e-08,64;UBERON:0001017,1.96e-08,73;UBERON:0003056,2.66e-08,49;UBERON:0001016,3.82e-08,75;UBERON:0003528,5.19e-08,29;UBERON:0002791,5.19e-08,29;UBERON:0001893,5.19e-08,29;UBERON:0003064,1.49e-07,14;UBERON:0010371,4.01e-07,73 | |||
|phase1_expression=0,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638436690425939,1.53606533256243,0,0.182975287204819,0,0.558365998002762,0,1.98637722109853,0.294628585473668,0.711858403995515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,4.75014845007439,1.56136794089522,0,0.691846491768175,2.86373017049983,1.76383060703557,3.14166478324189,0,0,0,0,0,0,0,1.17112318804619,1.04723353406728,0,0,0,0,0.299581278809645,1.83000241127451,0.376963056338593,1.39059456153821,1.53429274398198,1.24672826735736,0.973447578406546,0,0,0,0.210441855886474,0,0,0,0.30140963567143,0.136072998302656,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89260953707715,0.205809224758569,0,0,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0.190225626112559,1.42358718463353,0.329397909448022,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0.597423819763102,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,0,1.03135543248187,9.53230896110606,0,0,0,0.177340233642274,0.891844088010353,0.493647061806363,1.2178597964584,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.38097570952153,0.572895513439397,1.54667864109319,0,0,0.675022500231806,0.900642406448441,1.81256963593682,0.51776031175182,0,0,0.170733605754134,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0,0,0,0,0,0,0,0.0985044823755635,0.409231043169689,0,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638436690425939,1.53606533256243,0,0.182975287204819,0,0.558365998002762,0,1.98637722109853,0.294628585473668,0.711858403995515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,4.75014845007439,1.56136794089522,0,0.691846491768175,2.86373017049983,1.76383060703557,3.14166478324189,0,0,0,0,0,0,0,1.17112318804619,1.04723353406728,0,0,0,0,0.299581278809645,1.83000241127451,0.376963056338593,1.39059456153821,1.53429274398198,1.24672826735736,0.973447578406546,0,0,0,0.210441855886474,0,0,0,0.30140963567143,0.136072998302656,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89260953707715,0.205809224758569,0,0,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0.190225626112559,1.42358718463353,0.329397909448022,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0.597423819763102,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,0,1.03135543248187,9.53230896110606,0,0,0,0.177340233642274,0.891844088010353,0.493647061806363,1.2178597964584,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.38097570952153,0.572895513439397,1.54667864109319,0,0,0.675022500231806,0.900642406448441,1.81256963593682,0.51776031175182,0,0,0.170733605754134,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0,0,0,0,0,0,0,0.0985044823755635,0.409231043169689,0,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p@chr2:132618345..132618358,- | |short_description=p@chr2:132618345..132618358,- | ||
}} | }} |
Latest revision as of 02:53, 4 August 2015
Short description: | p@chr2:132618345..132618358, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:132618345..132618358, - |
Coexpression cluster: | MCL_coexpression_mm9:535 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adrenal gland | 2.36e-15 | 7 |
adrenal/interrenal gland | 2.36e-15 | 7 |
regional part of brain | 1.25e-12 | 46 |
brain | 2.60e-12 | 47 |
future brain | 2.60e-12 | 47 |
regional part of nervous system | 2.88e-12 | 54 |
structure with developmental contribution from neural crest | 1.61e-11 | 92 |
neural tube | 6.53e-11 | 52 |
neural rod | 6.53e-11 | 52 |
future spinal cord | 6.53e-11 | 52 |
neural keel | 6.53e-11 | 52 |
regional part of forebrain | 6.69e-11 | 39 |
forebrain | 6.69e-11 | 39 |
future forebrain | 6.69e-11 | 39 |
anterior neural tube | 1.39e-10 | 40 |
neurectoderm | 1.92e-08 | 64 |
neural plate | 1.92e-08 | 64 |
presumptive neural plate | 1.92e-08 | 64 |
central nervous system | 1.96e-08 | 73 |
pre-chordal neural plate | 2.66e-08 | 49 |
nervous system | 3.82e-08 | 75 |
brain grey matter | 5.19e-08 | 29 |
regional part of telencephalon | 5.19e-08 | 29 |
telencephalon | 5.19e-08 | 29 |
intermediate mesoderm | 1.49e-07 | 14 |
ecto-epithelium | 4.01e-07 | 73 |