FFCP PHASE1:Mm9::chr14:22667688..22667709,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=64 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=19bp_to_ENSMUST00000169054_5end | |association_with_transcript=19bp_to_ENSMUST00000169054_5end | ||
|cluster_id=chr14:22667688..22667709,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000169054_5end | |description=CAGE_peak_1_at_ENSMUST00000169054_5end | ||
|id=chr14:22667688..22667709,+ | |id=chr14:22667688..22667709,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.63e-10,9;CL:0002251,1.63e-10,9;CL:0000473,6.69e-10,7;CL:0000764,3.05e-09,3;CL:0000765,3.05e-09,3;CL:0000038,3.05e-09,3;CL:0000547,3.05e-09,3;CL:0000682,1.26e-08,3;CL:0000893,4.17e-08,6;CL:0002489,4.17e-08,6;CL:0000898,4.17e-08,6;CL:0000809,4.17e-08,6;CL:0000810,4.17e-08,6;CL:0000895,4.17e-08,6;CL:0000808,4.17e-08,6;CL:0000894,4.17e-08,6;CL:0000806,4.17e-08,6;CL:0000807,4.17e-08,6;CL:0000805,4.17e-08,6;CL:0002425,4.17e-08,6;CL:0002436,4.17e-08,6;CL:0002427,4.17e-08,6;CL:0002428,4.17e-08,6;CL:0002429,4.17e-08,6;CL:0002433,4.17e-08,6;CL:0002431,4.17e-08,6;CL:0002432,4.17e-08,6;CL:0002031,5.72e-08,25;CL:0000239,1.15e-07,6;CL:0000677,1.15e-07,6;CL:0000584,1.15e-07,6;CL:0000066,2.68e-07,25;CL:0002476,5.18e-07,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:2531,3.05e-09,3;DOID:0060083,3.05e-09,3;DOID:1240,3.05e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002108!4.51e-08!16;UBERON:0000160!8.15e-08!43;UBERON:0005409!2.85e-07!59;UBERON:0001264!3.19e-07!12;UBERON:0003922!3.19e-07!12;UBERON:0002114!3.19e-07!12;UBERON:0003923!3.19e-07!12;UBERON:0003924!3.19e-07!12;UBERON:0003921!3.19e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.48e-13,15;UBERON:0003350,1.63e-10,9;UBERON:0004808,1.63e-10,9;UBERON:0001277,1.63e-10,9;UBERON:0001242,2.43e-09,13;UBERON:0001262,2.43e-09,13;UBERON:0004786,2.43e-09,13;UBERON:0002465,1.12e-08,3;UBERON:0000485,1.78e-08,11;UBERON:0004923,1.01e-07,24 | |||
|phase1_expression=0.160148847104794,1.74487703819681,3.18499467572675,0.60492842261366,0,1.51091344720701,1.16806320297763,0.387369970324729,3.51971805379167,4.68129052643987,1.36974374580404,3.11111420081812,0.171200729931206,0.0874204024189974,0.333109761815663,0.202475267389826,0,0.630924330716475,0,0.84877930359606,0.255129870453209,0.198581902401771,0.522399578277871,2.87986361028132,1.60586496747019,1.14846392823004,1.29228598847722,1.72376986148711,0.570070258369122,0.252030129759931,1.10865255327652,1.90509202037889,1.23012957516914,15.8481681015439,1.1554064790051,0.664938581433969,1.42918549383658,0,0,0,0,0.683045484958446,0,0.629484089877886,1.21652317463417,0.917733760808408,0,0,0.219686182734472,0.388859798148567,0,0,0,0.725362142011344,0.672187598284928,0.514518872071894,0.286533439938757,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0,0,0,0,1.10115880999389,0.766124028511126,0.153606533256243,0.263772575460388,0,0,0.558365998002762,0.56276261003168,0.45839474333043,0.294628585473668,0.142371680799103,0,0.681535739998656,0.0755715601067855,0,0,0,0,0,0.448026887097336,0.561777680527007,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0.506719730950197,0,0,1.03575153458869,0.445326417194474,0.173485326766136,0.304465478312141,0,0.301445281105245,0.587943535678524,0.502666365318702,0.741584903203122,0.289198713839823,0,0.161766849947409,0,0,0,0.292780797011547,0.209446706813455,0.255457055208591,0.239630249011841,0,0.508280908292259,0.449371918214468,0.915001205637253,0,0.173824320192276,0.255715457330331,0.62336413367868,0.324482526135515,0,0.124406970610093,1.26361379216837,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0.199034266818493,0.702213187313235,0,0,0,0.469052119962192,0.180062061461015,0,0.196764231747404,0.154267112887378,0.465067889500816,0.268273401399619,0.233530684734339,0,0,0.0810688095458557,0.146199987425332,0.219550115291051,0,0.210289948564127,0.411618449517138,0,0.264450566663544,0,0,0.644337306610467,0.403367049246685,0.444756087689741,0.570676878337677,0.474529061544512,0,0.251335208800269,0,0,0,0.216138049874694,0.199141273254367,0.379335801906163,0,0,0,0,0.280543279561274,0.189709611372772,0,0.156998727841375,0.123397163921801,0.296452627087149,0.166845105716094,0.393117990226406,0.449724224769707,0.202860121388503,0.241177159752417,0,0.575392274901621,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0.144649058581512,3.01582567878545,3.80733978673097,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,1.13552068166615,0,0,0.494910368917606,1.32745138339963,0.728341908464944,0.906970670894253,0.943025398779491,2.06711325016541,0.614870295887855,0.516856586336442,0.363533729477506,0.712994756769443,1.26414703174326,1.05418608574999,1.03135543248187,1.02131881726136,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,0.18542530201051,0.854354403989263,0,0,0.376736914009382,0.27338845544205,0,0,0.139951452323658,0.138199973804424,0.954670618015114,0.158167996790568,0.406638934253697,0,0,0.655087691238533,0.134864346384821,0.330613822901344,1.04702376793612,0,0,1.12738587736838,0.149516546043979,0.165458490457098,0.194451188344048,0.258319646955462,0.675824501963113,0.469428954583016,0.2604087696879,0.419437377702843,0.241584120826006,0,0.316011120628178,0,0.513554785824136,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0.201932899896295,0.15241361331,0,0.292373642219257,0.288635524920988,0,0,0,0.807424709485281,0.839423081820392,0,0.375364950902364,0.36630324853453,0,0,0.564751842617067,0,0,0,0,0.755393897389701,0,0,0,0.51776031175182,0,0,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0.50695859978048,0,0.0936415074698824,0.128050304809739,0.287177344778066,0,0.463537303779422,0.192909220463705,0.412085900803307,0.441596760403192,0,0,0.238436189947321,0,0,0,0,0,0,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0.160148847104794,1.74487703819681,3.18499467572675,0.60492842261366,0,1.51091344720701,1.16806320297763,0.387369970324729,3.51971805379167,4.68129052643987,1.36974374580404,3.11111420081812,0.171200729931206,0.0874204024189974,0.333109761815663,0.202475267389826,0,0.630924330716475,0,0.84877930359606,0.255129870453209,0.198581902401771,0.522399578277871,2.87986361028132,1.60586496747019,1.14846392823004,1.29228598847722,1.72376986148711,0.570070258369122,0.252030129759931,1.10865255327652,1.90509202037889,1.23012957516914,15.8481681015439,1.1554064790051,0.664938581433969,1.42918549383658,0,0,0,0,0.683045484958446,0,0.629484089877886,1.21652317463417,0.917733760808408,0,0,0.219686182734472,0.388859798148567,0,0,0,0.725362142011344,0.672187598284928,0.514518872071894,0.286533439938757,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0,0,0,0,1.10115880999389,0.766124028511126,0.153606533256243,0.263772575460388,0,0,0.558365998002762,0.56276261003168,0.45839474333043,0.294628585473668,0.142371680799103,0,0.681535739998656,0.0755715601067855,0,0,0,0,0,0.448026887097336,0.561777680527007,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0.506719730950197,0,0,1.03575153458869,0.445326417194474,0.173485326766136,0.304465478312141,0,0.301445281105245,0.587943535678524,0.502666365318702,0.741584903203122,0.289198713839823,0,0.161766849947409,0,0,0,0.292780797011547,0.209446706813455,0.255457055208591,0.239630249011841,0,0.508280908292259,0.449371918214468,0.915001205637253,0,0.173824320192276,0.255715457330331,0.62336413367868,0.324482526135515,0,0.124406970610093,1.26361379216837,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0.199034266818493,0.702213187313235,0,0,0,0.469052119962192,0.180062061461015,0,0.196764231747404,0.154267112887378,0.465067889500816,0.268273401399619,0.233530684734339,0,0,0.0810688095458557,0.146199987425332,0.219550115291051,0,0.210289948564127,0.411618449517138,0,0.264450566663544,0,0,0.644337306610467,0.403367049246685,0.444756087689741,0.570676878337677,0.474529061544512,0,0.251335208800269,0,0,0,0.216138049874694,0.199141273254367,0.379335801906163,0,0,0,0,0.280543279561274,0.189709611372772,0,0.156998727841375,0.123397163921801,0.296452627087149,0.166845105716094,0.393117990226406,0.449724224769707,0.202860121388503,0.241177159752417,0,0.575392274901621,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0.144649058581512,3.01582567878545,3.80733978673097,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,1.13552068166615,0,0,0.494910368917606,1.32745138339963,0.728341908464944,0.906970670894253,0.943025398779491,2.06711325016541,0.614870295887855,0.516856586336442,0.363533729477506,0.712994756769443,1.26414703174326,1.05418608574999,1.03135543248187,1.02131881726136,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,0.18542530201051,0.854354403989263,0,0,0.376736914009382,0.27338845544205,0,0,0.139951452323658,0.138199973804424,0.954670618015114,0.158167996790568,0.406638934253697,0,0,0.655087691238533,0.134864346384821,0.330613822901344,1.04702376793612,0,0,1.12738587736838,0.149516546043979,0.165458490457098,0.194451188344048,0.258319646955462,0.675824501963113,0.469428954583016,0.2604087696879,0.419437377702843,0.241584120826006,0,0.316011120628178,0,0.513554785824136,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0.201932899896295,0.15241361331,0,0.292373642219257,0.288635524920988,0,0,0,0.807424709485281,0.839423081820392,0,0.375364950902364,0.36630324853453,0,0,0.564751842617067,0,0,0,0,0.755393897389701,0,0,0,0.51776031175182,0,0,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0.50695859978048,0,0.0936415074698824,0.128050304809739,0.287177344778066,0,0.463537303779422,0.192909220463705,0.412085900803307,0.441596760403192,0,0,0.238436189947321,0,0,0,0,0,0,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p1@ENSMUST00000169054 | |short_description=p1@ENSMUST00000169054 | ||
}} | }} |
Latest revision as of 03:14, 4 August 2015
Short description: | p1@ENSMUST00000169054 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000169054_5end |
Coexpression cluster: | MCL_coexpression_mm9:64 |
Association with transcript: | 19bp_to_ENSMUST00000169054_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucosa | 2.48e-13 | 15 |
epithelium of mucosa | 1.63e-10 | 9 |
gastrointestinal system epithelium | 1.63e-10 | 9 |
intestinal epithelium | 1.63e-10 | 9 |
intestinal mucosa | 2.43e-09 | 13 |
wall of intestine | 2.43e-09 | 13 |
gastrointestinal system mucosa | 2.43e-09 | 13 |
lymphoid system | 1.12e-08 | 3 |
simple columnar epithelium | 1.78e-08 | 11 |
organ component layer | 1.01e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.05e-09 | 3 |
immune system cancer | 3.05e-09 | 3 |
leukemia | 3.05e-09 | 3 |