FFCP PHASE1:Mm9::chr16:90140245..90140256,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:90140245..90140256,+
|short_description=p@chr16:90140245..90140256,+
|description=CAGE_peak_at_chr16:90140245..90140256,+
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=919 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:90140245..90140256,+ | |||
|description=CAGE_peak_at_chr16:90140245..90140256,+ | |||
|id=chr16:90140245..90140256,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002369!9.45e-32!7;UBERON:0006858!9.45e-32!7;UBERON:0000473!5.74e-27!14;UBERON:0003135!4.31e-25!15;UBERON:0003101!1.89e-23!16;UBERON:0000079!1.89e-23!16;UBERON:0002342!4.76e-22!10;UBERON:0005062!4.76e-22!10;UBERON:0004176!5.31e-22!17;UBERON:0009196!5.31e-22!17;UBERON:0009117!5.31e-22!17;UBERON:0000991!1.03e-20!18;UBERON:0005564!1.03e-20!18;UBERON:0003064!1.45e-15!14;UBERON:0003133!3.14e-15!24;UBERON:0005156!5.82e-14!26;UBERON:0000990!5.82e-14!26;UBERON:0002323!1.96e-09!37;UBERON:0004458!1.96e-09!37;UBERON:0003886!3.76e-09!38;UBERON:0002553!6.97e-09!39;UBERON:0005157!9.99e-08!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.92e-26,14;UBERON:0003135,1.01e-24,15;UBERON:0003101,3.24e-23,16;UBERON:0000079,3.24e-23,16;UBERON:0004176,6.92e-22,17;UBERON:0009196,6.92e-22,17;UBERON:0009117,6.92e-22,17;UBERON:0000991,1.05e-20,18;UBERON:0005564,1.05e-20,18;UBERON:0003133,1.15e-15,24;UBERON:0005156,1.68e-14,26;UBERON:0000990,1.68e-14,26;UBERON:0002323,2.52e-10,37;UBERON:0004458,2.52e-10,37;UBERON:0003886,4.59e-10,38;UBERON:0002553,8.12e-10,39 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1875371125186,0.173485326766136,0.608930956624282,0.691846491768175,0.301445281105245,0.940709657085638,0.879666139307728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79419855252775,0.66183396182839,0.972255941720238,0.516639293910924,1.35164900392623,2.11243029562357,2.0832701575032,2.20204623293993,0.724752362478018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1875371125186,0.173485326766136,0.608930956624282,0.691846491768175,0.301445281105245,0.940709657085638,0.879666139307728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79419855252775,0.66183396182839,0.972255941720238,0.516639293910924,1.35164900392623,2.11243029562357,2.0832701575032,2.20204623293993,0.724752362478018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:90140245..90140256,+ | |||
}} | }} |
Latest revision as of 04:02, 4 August 2015
Short description: | p@chr16:90140245..90140256, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:90140245..90140256, + |
Coexpression cluster: | MCL_coexpression_mm9:919 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 1.92e-26 | 14 |
male reproductive organ | 1.01e-24 | 15 |
male organism | 3.24e-23 | 16 |
male reproductive system | 3.24e-23 | 16 |
external genitalia | 6.92e-22 | 17 |
indifferent external genitalia | 6.92e-22 | 17 |
indifferent gonad | 6.92e-22 | 17 |
gonad | 1.05e-20 | 18 |
gonad primordium | 1.05e-20 | 18 |
reproductive organ | 1.15e-15 | 24 |
reproductive structure | 1.68e-14 | 26 |
reproductive system | 1.68e-14 | 26 |
body cavity | 2.52e-10 | 37 |
body cavity or lining | 2.52e-10 | 37 |
body cavity precursor | 4.59e-10 | 38 |
anatomical cavity | 8.12e-10 | 39 |