FFCP PHASE1:Mm9::chr2:13981526..13981542,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1705|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:13981526..13981542,-|id=chr2:13981526..13981542,-|ontology_enrichment_celltype=CL:0002563!1.36e-19!9;CL:0002251!1.36e-19!9;CL:0000066!8.36e-12!25;CL:0000239!2.79e-11!6;CL:0000677!2.79e-11!6;CL:0000212!2.79e-11!6;CL:0000584!2.79e-11!6;CL:0002076!3.09e-11!15;CL:0002250!2.94e-10!3;CL:0000075!1.24e-09!7;CL:0000473!6.54e-09!3;CL:0000627!6.54e-09!3;CL:0000682!6.54e-09!3;CL:0000223!4.19e-08!20|ontology_enrichment_celltype_v019_2=CL:0002250,2.43e-14,3;CL:0002563,4.79e-12,9;CL:0002251,4.79e-12,9;CL:0000066,1.31e-07,25;CL:0002076,3.86e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!7.24e-36!15;UBERON:0000160!5.03e-34!43;UBERON:0001242!1.91e-30!13;UBERON:0000060!1.91e-30!13;UBERON:0001262!1.91e-30!13;UBERON:0004786!1.91e-30!13;UBERON:0005409!1.06e-25!59;UBERON:0004923!2.87e-21!24;UBERON:0003350!1.36e-19!9;UBERON:0004808!1.36e-19!9;UBERON:0001277!1.36e-19!9;UBERON:0000485!8.52e-16!11;UBERON:0001007!3.32e-11!128;UBERON:0001555!3.32e-11!128;UBERON:0007026!3.32e-11!128;UBERON:0004119!6.01e-11!130;UBERON:0000925!6.01e-11!130;UBERON:0006595!6.01e-11!130;UBERON:0000331!2.94e-10!3;UBERON:0002116!2.94e-10!3;UBERON:0001204!2.94e-10!3;UBERON:0001168!2.94e-10!3;UBERON:0004921!3.03e-09!126;UBERON:0004185!3.03e-09!126;UBERON:0001155!2.94e-07!2;UBERON:0000059!2.94e-07!2;UBERON:0001962!6.61e-07!2;UBERON:0001961!6.61e-07!2;UBERON:0001744!6.61e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.52e-33,31;UBERON:0000344,7.85e-28,15;UBERON:0005409,8.20e-24,47;UBERON:0001242,6.87e-21,13;UBERON:0001262,6.87e-21,13;UBERON:0004786,6.87e-21,13;UBERON:0002108,4.85e-18,4;UBERON:0004923,8.05e-17,24;UBERON:0000331,2.43e-14,3;UBERON:0002116,2.43e-14,3;UBERON:0001204,2.43e-14,3;UBERON:0001168,2.43e-14,3;UBERON:0003350,4.79e-12,9;UBERON:0004808,4.79e-12,9;UBERON:0001277,4.79e-12,9;UBERON:0001007,1.81e-10,116;UBERON:0001555,1.81e-10,116;UBERON:0007026,1.81e-10,116;UBERON:0004119,3.07e-10,118;UBERON:0000925,3.07e-10,118;UBERON:0006595,3.07e-10,118;UBERON:0001155,6.10e-10,2;UBERON:0000059,6.10e-10,2;UBERON:0000485,8.06e-10,11;UBERON:0001962,2.00e-09,2;UBERON:0001961,2.00e-09,2;UBERON:0001744,2.00e-09,2;UBERON:0004921,3.82e-08,114|phase1_expression=0,1.04692622291808,0.909998478779072,0,0.500895729946347,0.33575854382378,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,2.75291137280604,1.14846392823004,0.86152399231815,1.72376986148711,8.93110071444957,8.31699428207772,5.09980174507201,0,0,0,9.24325183204079,5.31950865147176,5.51257261908397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45567044872489,0,0,4.34276993854605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,1.05780226665418,0,0,0,0,0,0,2.37264530772256,0.164698954724011,0.251335208800269,0.795825888164603,0.38992817423824,1.79763881730844,2.16138049874694,3.78368419183298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:13981526..13981542,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1705 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:13981526..13981542,- | |||
|description=CAGE_peak_at_chr2:13981526..13981542,- | |||
|id=chr2:13981526..13981542,- | |||
|ontology_enrichment_celltype=CL:0002563!1.36e-19!9;CL:0002251!1.36e-19!9;CL:0000066!8.36e-12!25;CL:0000239!2.79e-11!6;CL:0000677!2.79e-11!6;CL:0000212!2.79e-11!6;CL:0000584!2.79e-11!6;CL:0002076!3.09e-11!15;CL:0002250!2.94e-10!3;CL:0000075!1.24e-09!7;CL:0000473!6.54e-09!3;CL:0000627!6.54e-09!3;CL:0000682!6.54e-09!3;CL:0000223!4.19e-08!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,2.43e-14,3;CL:0002563,4.79e-12,9;CL:0002251,4.79e-12,9;CL:0000066,1.31e-07,25;CL:0002076,3.86e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.24e-36!15;UBERON:0000160!5.03e-34!43;UBERON:0001242!1.91e-30!13;UBERON:0000060!1.91e-30!13;UBERON:0001262!1.91e-30!13;UBERON:0004786!1.91e-30!13;UBERON:0005409!1.06e-25!59;UBERON:0004923!2.87e-21!24;UBERON:0003350!1.36e-19!9;UBERON:0004808!1.36e-19!9;UBERON:0001277!1.36e-19!9;UBERON:0000485!8.52e-16!11;UBERON:0001007!3.32e-11!128;UBERON:0001555!3.32e-11!128;UBERON:0007026!3.32e-11!128;UBERON:0004119!6.01e-11!130;UBERON:0000925!6.01e-11!130;UBERON:0006595!6.01e-11!130;UBERON:0000331!2.94e-10!3;UBERON:0002116!2.94e-10!3;UBERON:0001204!2.94e-10!3;UBERON:0001168!2.94e-10!3;UBERON:0004921!3.03e-09!126;UBERON:0004185!3.03e-09!126;UBERON:0001155!2.94e-07!2;UBERON:0000059!2.94e-07!2;UBERON:0001962!6.61e-07!2;UBERON:0001961!6.61e-07!2;UBERON:0001744!6.61e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.52e-33,31;UBERON:0000344,7.85e-28,15;UBERON:0005409,8.20e-24,47;UBERON:0001242,6.87e-21,13;UBERON:0001262,6.87e-21,13;UBERON:0004786,6.87e-21,13;UBERON:0002108,4.85e-18,4;UBERON:0004923,8.05e-17,24;UBERON:0000331,2.43e-14,3;UBERON:0002116,2.43e-14,3;UBERON:0001204,2.43e-14,3;UBERON:0001168,2.43e-14,3;UBERON:0003350,4.79e-12,9;UBERON:0004808,4.79e-12,9;UBERON:0001277,4.79e-12,9;UBERON:0001007,1.81e-10,116;UBERON:0001555,1.81e-10,116;UBERON:0007026,1.81e-10,116;UBERON:0004119,3.07e-10,118;UBERON:0000925,3.07e-10,118;UBERON:0006595,3.07e-10,118;UBERON:0001155,6.10e-10,2;UBERON:0000059,6.10e-10,2;UBERON:0000485,8.06e-10,11;UBERON:0001962,2.00e-09,2;UBERON:0001961,2.00e-09,2;UBERON:0001744,2.00e-09,2;UBERON:0004921,3.82e-08,114 | |||
|phase1_expression=0,1.04692622291808,0.909998478779072,0,0.500895729946347,0.33575854382378,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,2.75291137280604,1.14846392823004,0.86152399231815,1.72376986148711,8.93110071444957,8.31699428207772,5.09980174507201,0,0,0,9.24325183204079,5.31950865147176,5.51257261908397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45567044872489,0,0,4.34276993854605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,1.05780226665418,0,0,0,0,0,0,2.37264530772256,0.164698954724011,0.251335208800269,0.795825888164603,0.38992817423824,1.79763881730844,2.16138049874694,3.78368419183298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:13981526..13981542,- | |||
}} |
Latest revision as of 04:04, 4 August 2015
Short description: | p@chr2:13981526..13981542, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:13981526..13981542, - |
Coexpression cluster: | MCL_coexpression_mm9:1705 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 2.43e-14 | 3 |
intestinal epithelial cell | 4.79e-12 | 9 |
epithelial cell of alimentary canal | 4.79e-12 | 9 |
epithelial cell | 1.31e-07 | 25 |
endo-epithelial cell | 3.86e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.52e-33 | 31 |
mucosa | 7.85e-28 | 15 |
gastrointestinal system | 8.20e-24 | 47 |
intestinal mucosa | 6.87e-21 | 13 |
wall of intestine | 6.87e-21 | 13 |
gastrointestinal system mucosa | 6.87e-21 | 13 |
small intestine | 4.85e-18 | 4 |
organ component layer | 8.05e-17 | 24 |
ileal mucosa | 2.43e-14 | 3 |
ileum | 2.43e-14 | 3 |
mucosa of small intestine | 2.43e-14 | 3 |
wall of small intestine | 2.43e-14 | 3 |
epithelium of mucosa | 4.79e-12 | 9 |
gastrointestinal system epithelium | 4.79e-12 | 9 |
intestinal epithelium | 4.79e-12 | 9 |
digestive system | 1.81e-10 | 116 |
digestive tract | 1.81e-10 | 116 |
primitive gut | 1.81e-10 | 116 |
endoderm-derived structure | 3.07e-10 | 118 |
endoderm | 3.07e-10 | 118 |
presumptive endoderm | 3.07e-10 | 118 |
colon | 6.10e-10 | 2 |
large intestine | 6.10e-10 | 2 |
simple columnar epithelium | 8.06e-10 | 11 |
gut-associated lymphoid tissue | 2.00e-09 | 2 |
mucosa-associated lymphoid tissue | 2.00e-09 | 2 |
lymphoid tissue | 2.00e-09 | 2 |
subdivision of digestive tract | 3.82e-08 | 114 |