FFCP PHASE1:Mm9::chr16:91011274..91011314,-: Difference between revisions
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{{FFCP|EntrezGene=104015|HGNC=|MCL_coexpression_id=1585|UniProt=D3Z1M7|association_with_transcript=0bp_to_ENSMUST00000118246,ENSMUST00000130813,ENSMUST00000156140_5end|description=CAGE_peak_1_at_Synj1_5end|id=chr16:91011274..91011314,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!6.54e-07!51;UBERON:0001049!8.99e-07!52;UBERON:0005068!8.99e-07!52;UBERON:0006241!8.99e-07!52;UBERON:0007135!8.99e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.07e-07,54;UBERON:0007023,6.54e-07,51;UBERON:0001049,8.99e-07,52;UBERON:0005068,8.99e-07,52;UBERON:0006241,8.99e-07,52;UBERON:0007135,8.99e-07,52|phase1_expression=6.56610273129655,18.8446720125255,24.5699589270349,32.061206398524,43.0770327753859,12.9267039372155,7.94282978024787,9.16775596435192,9.43284438416167,16.1504523162175,2.22583358693156,2.6324812468461,8.56003649656029,8.21751782738576,9.66018309265422,14.5782192520675,12.5921138063066,5.36285681109004,6.7186072466812,4.66828616977833,11.1406710097901,7.04965753526286,4.4403964153619,11.0394771727451,8.48814339948529,17.2269589234506,16.7997178502039,14.6520438226405,10.8313349090133,17.1380488236753,8.86922042621219,2.54012269383853,5.53558308826113,0,5.48818077527422,3.32469290716985,5.71674197534634,50.6423273191658,39.06676722619,34.5525671022707,65.8819266594736,56.692775251551,52.4351181273646,3.02152363141385,4.66333883609767,4.40512205188036,4.69434806608824,4.14247797122848,1.5378032791413,3.69416808241138,4.19959264876088,1.43752564364972,6.87908684836719,5.07753499407941,11.0910953717013,5.65970759279083,8.5960031981627,13.4074743992135,9.3065571995415,11.6378015439847,3.80298842103708,5.76035704517525,3.55717918444456,7.19919773825119,8.89979726310277,12.0781619540837,3.59520132622086,3.45796474789399,4.97710139080693,2.97013064329719,3.78584930432488,12.8542942981712,9.93908434282261,4.77714116938321,4.02550978276593,4.5960939330501,24.2254938198655,36.2632040161933,32.1037654505549,10.6827893061457,13.5401712531566,11.9810075228055,26.2432019061298,21.3849791812038,29.6428600687012,17.3830865429464,18.3659468230843,11.9295645328192,3.86203585999239,5.36558076758177,14.7830889237856,6.0229671388697,5.439770669662,5.93673510801599,3.89865850468601,3.13618820968135,4.77511028447956,5.79463096765396,4.93593408745451,4.94675404314476,4.22530259330042,15.3991772897181,17.8363667794652,35.5533351576666,4.5463118612355,3.29367825117628,4.54972000513305,9.81981365583916,19.6792791571851,9.35185476108396,5.03107447621794,5.1759131313064,5.76538743140146,4.97384713823654,5.29149182110672,4.90099706185734,19.7755974187499,10.4111536982336,11.4999371753484,4.69123864847487,9.49618529379692,14.0613823409214,14.9113408974498,21.958559775866,24.2958179903608,10.9846533739694,3.71426885968353,5.39912457894067,4.3203877204842,27.861058929297,16.4700217014706,4.90051973240171,32.1574992355711,27.105838477015,24.5189892580281,27.0942909323155,3.05518091550949,7.58882520721567,4.54900965180614,9.46988351489133,2.99277018814219,2.06911893990126,4.32149111532838,5.12396380641431,7.75616090325138,9.09607414022434,7.12133106653939,12.1590584247337,3.01795190105979,2.26927296201383,2.63926686245923,1.7535658594206,4.17070873838397,3.83077383174383,2.46938563689532,2.58744546864041,7.02213187313235,4.88961023517959,5.39910648851626,4.14251545071004,4.69052119962192,5.04173772090842,2.3674473558521,5.3126342571799,2.93107514486019,5.8133486187602,2.95100741539581,7.70651259623319,7.40519324610662,5.74586124276833,7.37726166867287,6.87139940899062,8.78200461164202,9.39444931322602,31.1229123874908,5.35103984372279,15.8601015832223,10.8424732332053,1.91959425481711,2.55460339046482,4.76809606891745,11.8993279527772,11.7860363237781,7.98947629672748,12.8122846617018,11.8583247401288,17.0907941984183,17.5081695396213,16.5719474051252,13.4822911298133,17.0749059401008,16.1304431336037,1.13800740571849,3.88444942873078,4.50830942692322,4.48032921259691,2.90928730751439,6.10181633045771,7.77809406628365,10.0374900626129,6.59394656933774,9.25478729413504,7.41131567717872,4.00428253718626,7.46924181430171,9.89393294493356,7.1001042485976,11.3353265083636,7.89340140522401,7.76779571117189,9.24170792617702,5.76578967694971,4.31304619582064,5.20997326735905,6.86482880852033,6.06189307073068,3.58794827043824,6.75420929908714,13.3022296919955,2.08440552947533,3.09633455239849,3.39490171550376,4.45911471748154,7.20276906999808,7.85544014923845,12.4885534628991,12.2955412402829,8.19419351700467,8.6105575075043,11.3065687153859,12.0879487306127,12.729117155173,28.6503439484617,35.3538694482161,4.42587845717133,4.13905119457099,23.7614873181932,26.9586879162067,1.14754461763673,6.05930225290495,2.2085575359138,2.73307121007647,7.75524231838076,2.38968797952552,3.7875774594007,5.94460714656548,5.66734982344852,7.3063964477828,7.90575555893047,21.8498495166829,6.24536374916382,1.95872164033981,4.23506094319298,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:104015 | |||
|HGNC= | |||
|MCL_coexpression_id=1585 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3Z1M7 | |||
|association_with_transcript=0bp_to_ENSMUST00000118246,ENSMUST00000130813,ENSMUST00000156140_5end | |||
|cluster_id=chr16:91011274..91011314,- | |||
|description=CAGE_peak_1_at_Synj1_5end | |||
|id=chr16:91011274..91011314,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.54e-07!51;UBERON:0001049!8.99e-07!52;UBERON:0005068!8.99e-07!52;UBERON:0006241!8.99e-07!52;UBERON:0007135!8.99e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.07e-07,54;UBERON:0007023,6.54e-07,51;UBERON:0001049,8.99e-07,52;UBERON:0005068,8.99e-07,52;UBERON:0006241,8.99e-07,52;UBERON:0007135,8.99e-07,52 | |||
|phase1_expression=6.56610273129655,18.8446720125255,24.5699589270349,32.061206398524,43.0770327753859,12.9267039372155,7.94282978024787,9.16775596435192,9.43284438416167,16.1504523162175,2.22583358693156,2.6324812468461,8.56003649656029,8.21751782738576,9.66018309265422,14.5782192520675,12.5921138063066,5.36285681109004,6.7186072466812,4.66828616977833,11.1406710097901,7.04965753526286,4.4403964153619,11.0394771727451,8.48814339948529,17.2269589234506,16.7997178502039,14.6520438226405,10.8313349090133,17.1380488236753,8.86922042621219,2.54012269383853,5.53558308826113,0,5.48818077527422,3.32469290716985,5.71674197534634,50.6423273191658,39.06676722619,34.5525671022707,65.8819266594736,56.692775251551,52.4351181273646,3.02152363141385,4.66333883609767,4.40512205188036,4.69434806608824,4.14247797122848,1.5378032791413,3.69416808241138,4.19959264876088,1.43752564364972,6.87908684836719,5.07753499407941,11.0910953717013,5.65970759279083,8.5960031981627,13.4074743992135,9.3065571995415,11.6378015439847,3.80298842103708,5.76035704517525,3.55717918444456,7.19919773825119,8.89979726310277,12.0781619540837,3.59520132622086,3.45796474789399,4.97710139080693,2.97013064329719,3.78584930432488,12.8542942981712,9.93908434282261,4.77714116938321,4.02550978276593,4.5960939330501,24.2254938198655,36.2632040161933,32.1037654505549,10.6827893061457,13.5401712531566,11.9810075228055,26.2432019061298,21.3849791812038,29.6428600687012,17.3830865429464,18.3659468230843,11.9295645328192,3.86203585999239,5.36558076758177,14.7830889237856,6.0229671388697,5.439770669662,5.93673510801599,3.89865850468601,3.13618820968135,4.77511028447956,5.79463096765396,4.93593408745451,4.94675404314476,4.22530259330042,15.3991772897181,17.8363667794652,35.5533351576666,4.5463118612355,3.29367825117628,4.54972000513305,9.81981365583916,19.6792791571851,9.35185476108396,5.03107447621794,5.1759131313064,5.76538743140146,4.97384713823654,5.29149182110672,4.90099706185734,19.7755974187499,10.4111536982336,11.4999371753484,4.69123864847487,9.49618529379692,14.0613823409214,14.9113408974498,21.958559775866,24.2958179903608,10.9846533739694,3.71426885968353,5.39912457894067,4.3203877204842,27.861058929297,16.4700217014706,4.90051973240171,32.1574992355711,27.105838477015,24.5189892580281,27.0942909323155,3.05518091550949,7.58882520721567,4.54900965180614,9.46988351489133,2.99277018814219,2.06911893990126,4.32149111532838,5.12396380641431,7.75616090325138,9.09607414022434,7.12133106653939,12.1590584247337,3.01795190105979,2.26927296201383,2.63926686245923,1.7535658594206,4.17070873838397,3.83077383174383,2.46938563689532,2.58744546864041,7.02213187313235,4.88961023517959,5.39910648851626,4.14251545071004,4.69052119962192,5.04173772090842,2.3674473558521,5.3126342571799,2.93107514486019,5.8133486187602,2.95100741539581,7.70651259623319,7.40519324610662,5.74586124276833,7.37726166867287,6.87139940899062,8.78200461164202,9.39444931322602,31.1229123874908,5.35103984372279,15.8601015832223,10.8424732332053,1.91959425481711,2.55460339046482,4.76809606891745,11.8993279527772,11.7860363237781,7.98947629672748,12.8122846617018,11.8583247401288,17.0907941984183,17.5081695396213,16.5719474051252,13.4822911298133,17.0749059401008,16.1304431336037,1.13800740571849,3.88444942873078,4.50830942692322,4.48032921259691,2.90928730751439,6.10181633045771,7.77809406628365,10.0374900626129,6.59394656933774,9.25478729413504,7.41131567717872,4.00428253718626,7.46924181430171,9.89393294493356,7.1001042485976,11.3353265083636,7.89340140522401,7.76779571117189,9.24170792617702,5.76578967694971,4.31304619582064,5.20997326735905,6.86482880852033,6.06189307073068,3.58794827043824,6.75420929908714,13.3022296919955,2.08440552947533,3.09633455239849,3.39490171550376,4.45911471748154,7.20276906999808,7.85544014923845,12.4885534628991,12.2955412402829,8.19419351700467,8.6105575075043,11.3065687153859,12.0879487306127,12.729117155173,28.6503439484617,35.3538694482161,4.42587845717133,4.13905119457099,23.7614873181932,26.9586879162067,1.14754461763673,6.05930225290495,2.2085575359138,2.73307121007647,7.75524231838076,2.38968797952552,3.7875774594007,5.94460714656548,5.66734982344852,7.3063964477828,7.90575555893047,21.8498495166829,6.24536374916382,1.95872164033981,4.23506094319298,8.08353602565424,3.98235415019888,0.971122544619926,2.11626489875326,2.26326095707078,2.95301892880773,6.7635732547664,9.04499026088774,6.5436071305951,8.55593708123331,7.58488219045958,7.37930260024991,6.18813259489121,14.6389030474129,3.24109969256358,3.75140182969988,4.28674070063185,6.91626911204867,7.66985915688903,5.92376474167636,6.69822888052118,5.86679270159276,6.14313005505079,6.17479514553893,7.58476763530808,4.52100394748536,4.644095219468,5.01363844813173,5.41664969158702,18.0718118710507,23.1781627513137,10.9357363710626,4.95328483111734,6.66700298530962,10.5486335922627,10.1153728513559,10.7525741407066,5.26933132980952,5.87796099759364,4.69879910935041,1.90934123603023,1.73984796469624,4.879667211044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| |||
|short_description=p1@Synj1 | |||
}} |
Revision as of 04:23, 4 August 2015
Short description: | p1@Synj1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Synj1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1585 |
Association with transcript: | 0bp_to_ENSMUST00000118246, ENSMUST00000130813, ENSMUST00000156140_5end |
EntrezGene: | 104015 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.07e-07 | 54 |
adult organism | 6.54e-07 | 51 |
neural tube | 8.99e-07 | 52 |
neural rod | 8.99e-07 | 52 |
future spinal cord | 8.99e-07 | 52 |
neural keel | 8.99e-07 | 52 |