FFCP PHASE1:Mm9::chr16:91044627..91044703,-: Difference between revisions
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{{FFCP|EntrezGene=67367|HGNC=|UniProt=E9QNN9,P58501|association_with_transcript=-3bp_to_NM_026110,uc007zwz.2,uc012aih.1_5end|description=CAGE_peak_1_at_Gcfc1_5end|id=chr16:91044627..91044703,-|ontology_enrichment_celltype=CL:0000540!5.18e-08!33;CL:0000047!5.18e-08!33;CL:0000031!5.18e-08!33;CL:0000404!5.18e-08!33|ontology_enrichment_celltype_v019_2=CL:0000540,5.18e-08,33;CL:0000047,5.18e-08,33;CL:0000031,5.18e-08,33;CL:0000404,5.18e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!3.91e-14!94;UBERON:0007811!3.23e-12!86;UBERON:0003408!4.54e-08!24;UBERON:0002370!5.03e-08!23;UBERON:0000974!5.03e-08!23;UBERON:0004807!5.03e-08!23;UBERON:0005058!5.03e-08!23;UBERON:0003351!5.03e-08!23;UBERON:0009113!5.03e-08!23;UBERON:0003295!5.03e-08!23;UBERON:0009722!5.03e-08!23;UBERON:0005562!5.03e-08!23;UBERON:0007690!5.03e-08!23;UBERON:0006562!3.88e-07!24;UBERON:0001557!3.88e-07!24;UBERON:0001042!3.88e-07!24;UBERON:0008814!3.88e-07!24;UBERON:0009145!3.88e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000153,6.32e-12,43;UBERON:0007811,4.57e-10,36;UBERON:0003408,4.54e-08,24;UBERON:0002370,5.03e-08,23;UBERON:0000974,5.03e-08,23;UBERON:0004807,5.03e-08,23;UBERON:0005058,5.03e-08,23;UBERON:0003351,5.03e-08,23;UBERON:0009113,5.03e-08,23;UBERON:0003295,5.03e-08,23;UBERON:0009722,5.03e-08,23;UBERON:0005562,5.03e-08,23;UBERON:0007690,5.03e-08,23;UBERON:0006562,3.88e-07,24;UBERON:0001557,3.88e-07,24;UBERON:0001042,3.88e-07,24;UBERON:0008814,3.88e-07,24;UBERON:0009145,3.88e-07,24|phase1_expression=39.5567652348841,8.02643437570531,14.1049764210756,18.4503168897166,17.5313505481222,20.8170297170743,15.1848216387092,66.111141602087,130.511145434595,136.693683372044,46.0576334526608,51.7721311879733,46.566598541288,52.0151394393035,14.3237197580735,15.5905955890166,6.99561878128147,23.1864691538305,24.5434836154272,27.585327366872,21.1757792476164,35.2482876763143,33.9559725880616,8.31960598525715,8.02932483735095,7.46501553349526,6.8921919385452,10.7735616342945,4.94060890586572,4.78857246543868,8.20402889424627,9.52546010189447,5.53558308826113,0,11.8429164098023,7.97926297720763,15.1085323634153,3.34825304589526,7.813353445238,3.66466620781659,4.1176204162171,4.78131839470912,5.82612423637384,13.2191658874356,12.8748702648783,12.664725899156,7.04152209913235,6.5407546914134,2.19686182734472,8.1660557611199,5.03951117851305,4.31257693094915,36.4088255145288,68.1840413490664,51.422351268797,12.6057123657614,20.3438742356517,14.9544906760458,44.1049884673923,53.4280889064753,42.466704034914,8.4711133017283,5.33576877666684,9.44894703145469,3.9554654502679,4.9733608046227,8.38880309451533,10.7581125490035,61.7990089358527,42.6618765128142,45.8508415746013,25.7085885963423,28.7129103237098,51.8136080679256,47.7310445670817,32.1726575313507,37.4393995397922,33.4540825783192,39.4768790468546,50.380561912934,42.5417542751205,67.197824801822,24.2889209131201,34.3285192119325,30.7124478031388,59.8096028511545,53.5317519804627,56.8518309767167,18.931548333296,19.5730340676574,32.7546872232896,10.3250865237766,8.15965600449301,8.63525106620507,5.19821133958135,6.72040330646003,10.6737759300131,8.01022516116871,6.23486411046885,9.18682893726885,68.0273717521367,29.5150898052931,86.6337815002595,106.660005473,9.09262372247099,8.86759529162845,7.58286667522175,12.1034912502204,27.9652914338945,19.1490359393624,26.5432549952188,27.0974275697806,16.6043158024362,21.553337599025,32.8072492908616,11.5613264023301,10.3821886448437,13.4477401935518,12.3845477272982,26.5297633913751,17.4464799583711,20.8496358848145,9.31958806090611,75.8302264259907,80.0086420027398,6.64188343542338,51.6403186620516,28.7953310876836,30.8780651787547,29.9581278809645,42.0900554593136,61.8219412395293,29.7239587528793,42.7044813741652,23.8956251243494,33.5839414550258,42.6706934532825,22.0200337979865,16.9324248150562,10.5220927943237,51.1373340843426,37.0142388137891,46.2759673599748,51.9931621533217,69.7374116301111,68.9251815132492,53.4099829990454,35.4423617912451,26.5148631307396,60.5139456537022,50.4979726350533,46.0311038097907,67.0093870633691,38.3077383174383,40.127516599549,48.3653268368938,18.2575428701441,18.0143534980301,21.8805894534606,34.3828782408933,36.8205914170321,32.9513572473657,37.168923486878,36.9916755685119,38.8753124476193,34.8800917125612,32.7293549707535,32.1104691509716,36.6968465307061,30.3709808546326,27.7255328646827,20.0293982772705,20.8572609526498,18.788898626452,34.9081314616451,61.6398628151914,7.59963200862735,9.25576983322405,50.9758918779209,54.1111445434822,34.2787447116768,26.8239087749046,20.6811580775729,15.7887269673424,9.01605216934572,10.7054320570607,20.8608223304224,19.8956472041151,23.3956904542944,8.08937467788799,9.72621224436124,7.56736838366595,16.8804431848243,43.1859377664775,45.0830942692322,39.508357601991,40.5360698180338,41.169726275617,34.0844935099747,24.0604541206752,17.4268587903926,15.7948369819905,7.41131567717872,20.8556382145118,19.8524585064335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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:67367 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9QNN9,uniprot:P58501 | |||
|association_with_transcript=-3bp_to_NM_026110,uc007zwz.2,uc012aih.1_5end | |||
|cluster_id=chr16:91044627..91044703,- | |||
|description=CAGE_peak_1_at_Gcfc1_5end | |||
|id=chr16:91044627..91044703,- | |||
|ontology_enrichment_celltype=CL:0000540!5.18e-08!33;CL:0000047!5.18e-08!33;CL:0000031!5.18e-08!33;CL:0000404!5.18e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.18e-08,33;CL:0000047,5.18e-08,33;CL:0000031,5.18e-08,33;CL:0000404,5.18e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!3.91e-14!94;UBERON:0007811!3.23e-12!86;UBERON:0003408!4.54e-08!24;UBERON:0002370!5.03e-08!23;UBERON:0000974!5.03e-08!23;UBERON:0004807!5.03e-08!23;UBERON:0005058!5.03e-08!23;UBERON:0003351!5.03e-08!23;UBERON:0009113!5.03e-08!23;UBERON:0003295!5.03e-08!23;UBERON:0009722!5.03e-08!23;UBERON:0005562!5.03e-08!23;UBERON:0007690!5.03e-08!23;UBERON:0006562!3.88e-07!24;UBERON:0001557!3.88e-07!24;UBERON:0001042!3.88e-07!24;UBERON:0008814!3.88e-07!24;UBERON:0009145!3.88e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,6.32e-12,43;UBERON:0007811,4.57e-10,36;UBERON:0003408,4.54e-08,24;UBERON:0002370,5.03e-08,23;UBERON:0000974,5.03e-08,23;UBERON:0004807,5.03e-08,23;UBERON:0005058,5.03e-08,23;UBERON:0003351,5.03e-08,23;UBERON:0009113,5.03e-08,23;UBERON:0003295,5.03e-08,23;UBERON:0009722,5.03e-08,23;UBERON:0005562,5.03e-08,23;UBERON:0007690,5.03e-08,23;UBERON:0006562,3.88e-07,24;UBERON:0001557,3.88e-07,24;UBERON:0001042,3.88e-07,24;UBERON:0008814,3.88e-07,24;UBERON:0009145,3.88e-07,24 | |||
|phase1_expression=39.5567652348841,8.02643437570531,14.1049764210756,18.4503168897166,17.5313505481222,20.8170297170743,15.1848216387092,66.111141602087,130.511145434595,136.693683372044,46.0576334526608,51.7721311879733,46.566598541288,52.0151394393035,14.3237197580735,15.5905955890166,6.99561878128147,23.1864691538305,24.5434836154272,27.585327366872,21.1757792476164,35.2482876763143,33.9559725880616,8.31960598525715,8.02932483735095,7.46501553349526,6.8921919385452,10.7735616342945,4.94060890586572,4.78857246543868,8.20402889424627,9.52546010189447,5.53558308826113,0,11.8429164098023,7.97926297720763,15.1085323634153,3.34825304589526,7.813353445238,3.66466620781659,4.1176204162171,4.78131839470912,5.82612423637384,13.2191658874356,12.8748702648783,12.664725899156,7.04152209913235,6.5407546914134,2.19686182734472,8.1660557611199,5.03951117851305,4.31257693094915,36.4088255145288,68.1840413490664,51.422351268797,12.6057123657614,20.3438742356517,14.9544906760458,44.1049884673923,53.4280889064753,42.466704034914,8.4711133017283,5.33576877666684,9.44894703145469,3.9554654502679,4.9733608046227,8.38880309451533,10.7581125490035,61.7990089358527,42.6618765128142,45.8508415746013,25.7085885963423,28.7129103237098,51.8136080679256,47.7310445670817,32.1726575313507,37.4393995397922,33.4540825783192,39.4768790468546,50.380561912934,42.5417542751205,67.197824801822,24.2889209131201,34.3285192119325,30.7124478031388,59.8096028511545,53.5317519804627,56.8518309767167,18.931548333296,19.5730340676574,32.7546872232896,10.3250865237766,8.15965600449301,8.63525106620507,5.19821133958135,6.72040330646003,10.6737759300131,8.01022516116871,6.23486411046885,9.18682893726885,68.0273717521367,29.5150898052931,86.6337815002595,106.660005473,9.09262372247099,8.86759529162845,7.58286667522175,12.1034912502204,27.9652914338945,19.1490359393624,26.5432549952188,27.0974275697806,16.6043158024362,21.553337599025,32.8072492908616,11.5613264023301,10.3821886448437,13.4477401935518,12.3845477272982,26.5297633913751,17.4464799583711,20.8496358848145,9.31958806090611,75.8302264259907,80.0086420027398,6.64188343542338,51.6403186620516,28.7953310876836,30.8780651787547,29.9581278809645,42.0900554593136,61.8219412395293,29.7239587528793,42.7044813741652,23.8956251243494,33.5839414550258,42.6706934532825,22.0200337979865,16.9324248150562,10.5220927943237,51.1373340843426,37.0142388137891,46.2759673599748,51.9931621533217,69.7374116301111,68.9251815132492,53.4099829990454,35.4423617912451,26.5148631307396,60.5139456537022,50.4979726350533,46.0311038097907,67.0093870633691,38.3077383174383,40.127516599549,48.3653268368938,18.2575428701441,18.0143534980301,21.8805894534606,34.3828782408933,36.8205914170321,32.9513572473657,37.168923486878,36.9916755685119,38.8753124476193,34.8800917125612,32.7293549707535,32.1104691509716,36.6968465307061,30.3709808546326,27.7255328646827,20.0293982772705,20.8572609526498,18.788898626452,34.9081314616451,61.6398628151914,7.59963200862735,9.25576983322405,50.9758918779209,54.1111445434822,34.2787447116768,26.8239087749046,20.6811580775729,15.7887269673424,9.01605216934572,10.7054320570607,20.8608223304224,19.8956472041151,23.3956904542944,8.08937467788799,9.72621224436124,7.56736838366595,16.8804431848243,43.1859377664775,45.0830942692322,39.508357601991,40.5360698180338,41.169726275617,34.0844935099747,24.0604541206752,17.4268587903926,15.7948369819905,7.41131567717872,20.8556382145118,19.8524585064335,17.3143826536337,13.9973483758067,17.6059326619264,18.5876871800436,22.4402987211632,17.6727397184789,10.4333337011471,23.0029130443767,19.3513292787622,20.2824487524464,10.6083128737787,6.81710171383266,3.85954817090694,10.9004382198297,39.0352308247199,43.1857187571369,42.436271443797,45.9992886645464,38.6939454690594,28.0891496245496,27.123577052234,37.2018940090611,37.6489972402917,38.5880540151119,23.2685906896348,19.858772914578,20.3955172599931,13.5712155545345,10.3342079925555,8.35999264132362,14.6246475541508,22.7981837782665,25.2005126173237,12.4590558486273,11.1087207969924,35.3369205746207,40.2151906625538,48.4702644898798,39.1908828642185,46.342124209138,53.2183877883005,38.457016659115,41.7925876813176,52.5732744668876,46.2702695647402,34.6333807908175,28.3124309830936,42.6763833506369,32.0042038566719,2.65490276679926,27.6769925216679,19.9533547596736,22.6326095707078,13.2885851796348,19.6758494684114,23.7754029714763,21.0849563096953,19.6073558111597,14.2216541071117,8.4334886859999,10.3135543248187,24.8520912200265,59.4201610303324,19.2744438836304,30.8645330445493,49.1232447189098,32.2847559859748,35.0489413882518,14.6143175575008,11.9682571112492,18.2175580942885,9.2621927183084,23.4138479176902,36.6524248599706,29.1311427402993,19.0995750405018,26.5908257586999,12.5336759750836,19.8405073151245,15.8909919142003,34.0538332139317,32.0386532349601,19.4019510714832,22.0077706630851,17.1583629904892,52.1833780081136,51.0822800981352,48.6463907791572,5.72802370809068,38.4348232201079,41.680490761004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| |||
|short_description=p1@Gcfc1 | |||
}} |
Revision as of 04:26, 4 August 2015
Short description: | p1@Gcfc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gcfc1_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_NM_026110, uc007zwz.2, uc012aih.1_5end |
EntrezGene: | 67367 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.18e-08 | 33 |
neuronal stem cell | 5.18e-08 | 33 |
neuroblast | 5.18e-08 | 33 |
electrically signaling cell | 5.18e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
anterior region of body | 6.32e-12 | 43 |
craniocervical region | 4.57e-10 | 36 |
gland of gut | 4.54e-08 | 24 |
thymus | 5.03e-08 | 23 |
neck | 5.03e-08 | 23 |
respiratory system epithelium | 5.03e-08 | 23 |
hemolymphoid system gland | 5.03e-08 | 23 |
pharyngeal epithelium | 5.03e-08 | 23 |
thymic region | 5.03e-08 | 23 |
pharyngeal gland | 5.03e-08 | 23 |
entire pharyngeal arch endoderm | 5.03e-08 | 23 |
thymus primordium | 5.03e-08 | 23 |
early pharyngeal endoderm | 5.03e-08 | 23 |
pharynx | 3.88e-07 | 24 |
upper respiratory tract | 3.88e-07 | 24 |
chordate pharynx | 3.88e-07 | 24 |
pharyngeal arch system | 3.88e-07 | 24 |
pharyngeal region of foregut | 3.88e-07 | 24 |