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FFCP PHASE1:Mm9::chr3:88981475..88981514,+: Difference between revisions

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{{FFCP|EntrezGene=24045|HGNC=|UniProt=|association_with_transcript=16bp_to_ENSMUST00000148881_5end|description=CAGE_peak_2_at_Scamp3_5end|id=chr3:88981475..88981514,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.10e-12!75;UBERON:0001016!3.10e-12!75;UBERON:0001017!4.54e-12!73;UBERON:0005743!4.54e-12!73;UBERON:0004121!3.83e-09!102;UBERON:0000924!3.83e-09!102;UBERON:0006601!3.83e-09!102;UBERON:0002346!4.00e-09!71;UBERON:0003075!4.00e-09!71;UBERON:0007284!4.00e-09!71;UBERON:0001049!4.12e-09!52;UBERON:0005068!4.12e-09!52;UBERON:0006241!4.12e-09!52;UBERON:0007135!4.12e-09!52;UBERON:0000025!4.93e-07!114;UBERON:0002616!5.78e-07!49;UBERON:0000955!6.75e-07!50;UBERON:0006238!6.75e-07!50|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.10e-12,75;UBERON:0001017,4.54e-12,73;UBERON:0000073,2.76e-09,54;UBERON:0001049,4.12e-09,52;UBERON:0005068,4.12e-09,52;UBERON:0006241,4.12e-09,52;UBERON:0007135,4.12e-09,52;UBERON:0004121,9.40e-08,95;UBERON:0000924,9.40e-08,95;UBERON:0006601,9.40e-08,95;UBERON:0002346,1.02e-07,64;UBERON:0003075,1.02e-07,64;UBERON:0007284,1.02e-07,64;UBERON:0000025,4.93e-07,114;UBERON:0010314,5.75e-07,92|phase1_expression=9.28863313207805,3.14077866875425,5.0049916332849,3.62957053568196,3.50627010962443,3.3575854382378,4.90586545250604,9.94249590500137,12.248618827195,13.8098070529976,3.25314139628459,4.3874687447435,7.70403284690426,9.61624426608971,0.666219523631325,2.42970320867791,4.19737126876888,2.20823515750766,1.91960207048034,0.84877930359606,6.97354979238772,5.95745707205312,6.00759515019551,9.27956052201759,5.96464130774642,3.44539178469012,3.01533397311352,7.54149314400612,7.9809836171677,7.05684363327806,7.09537634096975,5.71527606113668,3.69038872550742,0,2.3108129580102,3.49092755252834,3.87921776898501,1.25559489221072,0,0.523523743973798,1.17646297606203,0,0.485510353031154,8.43508680436368,7.60326984146359,9.36088436024576,70.4152209913235,14.171635164729,41.0813161713462,26.2480363750283,15.818465643666,27.3129872293446,2.85230430298152,7.25362142011344,10.7550015725588,14.1492689819771,10.601737277734,10.3134418455488,6.27181028664753,9.52183762689659,4.43681982454325,27.7852516296688,41.7968554172235,14.3983954765024,25.7105254267413,14.209602298922,24.8668091730276,23.4373166246148,2.07379224616955,2.43010688997043,1.68259969081106,25.7085885963423,26.283356373242,1.22490799214954,1.24599112323707,2.75765635983006,9.91042928994498,9.57655035638908,9.06278546211836,7.78129097608144,6.49562269577109,2.6045668527838,14.7966989470732,7.31591393041184,10.2374826010463,22.3917724959987,20.786265396669,14.5391567743734,6.20954785332109,9.74873125377533,7.53647670624362,11.185510400758,14.2793980078628,17.2705021324101,38.9865850468601,25.0895056774508,7.44355426698285,8.862376774059,5.45550609666024,9.89350808628953,7.18301440861071,7.69958864485907,12.7402619853323,7.11066703153331,5.19578498426914,5.32055717497707,5.56076889516262,8.44960709921044,6.47344709117929,6.53145411885229,14.2257967948231,14.0054120023585,13.1450833435953,10.399862198131,8.11362079236363,6.78599593180248,9.39340877390621,10.1219549843938,3.5384422077995,5.01477234836968,3.3126227769059,2.90925151881133,3.72783522436244,6.14839673724249,5.23616767033638,3.32094171771169,5.99075622529601,7.7987355029143,7.11593271609162,10.9347166765521,10.0650132620098,3.26701315493447,14.2535942557667,10.7400492078739,11.6361304953354,10.5456820994042,4.88828946481518,4.35424397135326,8.08712826987759,2.94618598241064,8.32770834961304,8.27647575960503,8.46292010085141,5.42537344208574,3.60593445502038,5.50888997224854,5.99691037182265,5.69147415625834,12.287375597172,8.32066752738405,9.85326295318113,10.302199424096,7.22922847986555,8.00979983000983,4.32142486456681,6.17006227137329,8.42655824775882,6.17634977075316,6.81992398549422,9.32065976409758,8.67746421930056,7.38254451990161,8.52281048106757,3.93528463494808,3.85667782218446,3.25547522650571,4.56064782379353,3.15266424391358,4.27855609775049,3.447516745661,4.37771571547621,4.09359964790931,4.61055242111206,4.02619256281115,15.7717461423095,5.76265829323993,3.63460661282178,3.43785736662608,7.67837701926842,7.19933682767359,7.21657783403723,10.8909103296605,8.45036566610507,8.56015317506516,3.32170343081158,8.56434564564857,4.52403375840485,2.98434708061726,3.8992817423824,3.59527763461689,4.75503709724327,5.97423819763102,12.7077493638565,6.16941968092536,15.7790829942313,6.10953983535943,6.59438456369928,6.10181633045771,9.92813632850839,9.15182917473533,10.8329122210549,10.9823475890402,13.6368208460088,7.00749444007595,8.05891879964132,6.74586337154561,7.1001042485976,5.788251834058,4.58326533206556,7.48009957372108,12.4844124616777,14.5517548989683,5.75072826109418,14.5134969590716,12.793544597697,14.9021537988796,18.477933592757,22.6748455040783,2.21703828199926,4.73728529426212,6.84452901056509,3.90413697282933,4.69380496577004,2.01007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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:24045
|HGNC=
|TSSclassifier=NA
|UniProt=
|association_with_transcript=16bp_to_ENSMUST00000148881_5end
|cluster_id=chr3:88981475..88981514,+
|description=CAGE_peak_2_at_Scamp3_5end
|id=chr3:88981475..88981514,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.10e-12,75;UBERON:0001017,4.54e-12,73;UBERON:0000073,2.76e-09,54;UBERON:0001049,4.12e-09,52;UBERON:0005068,4.12e-09,52;UBERON:0006241,4.12e-09,52;UBERON:0007135,4.12e-09,52;UBERON:0004121,9.40e-08,95;UBERON:0000924,9.40e-08,95;UBERON:0006601,9.40e-08,95;UBERON:0002346,1.02e-07,64;UBERON:0003075,1.02e-07,64;UBERON:0007284,1.02e-07,64;UBERON:0000025,4.93e-07,114;UBERON:0010314,5.75e-07,92
|phase1_expression=9.28863313207805,3.14077866875425,5.0049916332849,3.62957053568196,3.50627010962443,3.3575854382378,4.90586545250604,9.94249590500137,12.248618827195,13.8098070529976,3.25314139628459,4.3874687447435,7.70403284690426,9.61624426608971,0.666219523631325,2.42970320867791,4.19737126876888,2.20823515750766,1.91960207048034,0.84877930359606,6.97354979238772,5.95745707205312,6.00759515019551,9.27956052201759,5.96464130774642,3.44539178469012,3.01533397311352,7.54149314400612,7.9809836171677,7.05684363327806,7.09537634096975,5.71527606113668,3.69038872550742,0,2.3108129580102,3.49092755252834,3.87921776898501,1.25559489221072,0,0.523523743973798,1.17646297606203,0,0.485510353031154,8.43508680436368,7.60326984146359,9.36088436024576,70.4152209913235,14.171635164729,41.0813161713462,26.2480363750283,15.818465643666,27.3129872293446,2.85230430298152,7.25362142011344,10.7550015725588,14.1492689819771,10.601737277734,10.3134418455488,6.27181028664753,9.52183762689659,4.43681982454325,27.7852516296688,41.7968554172235,14.3983954765024,25.7105254267413,14.209602298922,24.8668091730276,23.4373166246148,2.07379224616955,2.43010688997043,1.68259969081106,25.7085885963423,26.283356373242,1.22490799214954,1.24599112323707,2.75765635983006,9.91042928994498,9.57655035638908,9.06278546211836,7.78129097608144,6.49562269577109,2.6045668527838,14.7966989470732,7.31591393041184,10.2374826010463,22.3917724959987,20.786265396669,14.5391567743734,6.20954785332109,9.74873125377533,7.53647670624362,11.185510400758,14.2793980078628,17.2705021324101,38.9865850468601,25.0895056774508,7.44355426698285,8.862376774059,5.45550609666024,9.89350808628953,7.18301440861071,7.69958864485907,12.7402619853323,7.11066703153331,5.19578498426914,5.32055717497707,5.56076889516262,8.44960709921044,6.47344709117929,6.53145411885229,14.2257967948231,14.0054120023585,13.1450833435953,10.399862198131,8.11362079236363,6.78599593180248,9.39340877390621,10.1219549843938,3.5384422077995,5.01477234836968,3.3126227769059,2.90925151881133,3.72783522436244,6.14839673724249,5.23616767033638,3.32094171771169,5.99075622529601,7.7987355029143,7.11593271609162,10.9347166765521,10.0650132620098,3.26701315493447,14.2535942557667,10.7400492078739,11.6361304953354,10.5456820994042,4.88828946481518,4.35424397135326,8.08712826987759,2.94618598241064,8.32770834961304,8.27647575960503,8.46292010085141,5.42537344208574,3.60593445502038,5.50888997224854,5.99691037182265,5.69147415625834,12.287375597172,8.32066752738405,9.85326295318113,10.302199424096,7.22922847986555,8.00979983000983,4.32142486456681,6.17006227137329,8.42655824775882,6.17634977075316,6.81992398549422,9.32065976409758,8.67746421930056,7.38254451990161,8.52281048106757,3.93528463494808,3.85667782218446,3.25547522650571,4.56064782379353,3.15266424391358,4.27855609775049,3.447516745661,4.37771571547621,4.09359964790931,4.61055242111206,4.02619256281115,15.7717461423095,5.76265829323993,3.63460661282178,3.43785736662608,7.67837701926842,7.19933682767359,7.21657783403723,10.8909103296605,8.45036566610507,8.56015317506516,3.32170343081158,8.56434564564857,4.52403375840485,2.98434708061726,3.8992817423824,3.59527763461689,4.75503709724327,5.97423819763102,12.7077493638565,6.16941968092536,15.7790829942313,6.10953983535943,6.59438456369928,6.10181633045771,9.92813632850839,9.15182917473533,10.8329122210549,10.9823475890402,13.6368208460088,7.00749444007595,8.05891879964132,6.74586337154561,7.1001042485976,5.788251834058,4.58326533206556,7.48009957372108,12.4844124616777,14.5517548989683,5.75072826109418,14.5134969590716,12.793544597697,14.9021537988796,18.477933592757,22.6748455040783,2.21703828199926,4.73728529426212,6.84452901056509,3.90413697282933,4.69380496577004,2.01007508930179,3.09456733151818,3.51240566144038,3.15270288212382,2.43611158613652,3.6674596791222,3.4411296090305,3.62638461918381,3.03763023021174,13.5712155545345,6.52686820582452,3.93411418415229,4.13905119457099,15.0917554588524,10.4318401067061,6.06559297893699,4.03953483526997,7.57219726599016,7.41833614163613,5.60100834105277,10.0366895140072,6.23836287430704,7.35998980050964,6.07216052512342,9.64444331107329,8.69633111482352,6.42642632843614,6.95506417520516,6.58842733568844,3.90928702448583,7.25868541079156,7.96470830039777,8.74010290157933,6.65111825322452,7.54420319023592,6.496641643377,3.3817866273832,1.80899805217755,9.08834323693764,5.70395805415554,4.74055136903724,5.27093042874994,4.12542172992747,4.08527526904546,9.54323798365944,12.5477923269272,11.574199891706,10.8177542521787,13.7343989553594,10.6956863391379,11.5696680663548,12.9069439435041,6.14313005505079,5.51320995137405,2.80306630000516,3.22928853391811,4.58378229453985,3.10368094408155,4.26766339337159,4.95517422270746,17.0591277849669,3.58828849675491,5.36605856704379,4.44466865687308,1.88368457004691,2.46049609897845,0.686334519619568,2.20971958992012,2.93898049879682,2.9021994498929,5.72802370809068,9.64824780422463,6.09958401380546,5.07625101862466,3.97267762427491,4.14888871117737,4.85511646985355,5.45512807787217,4.18809507174447,4.14767914533737,2.4853572523477,0.56369293868419,5.98066184175915,9.59659244651166,7.58359634541786,10.2036260547408,5.4065960157049,4.92900402312167,4.4269490846943,2.72634295506848,1.69108884578204,1.44015003128933,4.10814456816632,9.52808511863772,6.7789231728786,2.5984164595559,3.75956060901711,2.98022032171897,3.4856680360791,3.39685912501528,3.43285929823702,1.752756553065,2.11734988787365,2.43644701849381,1.73181314952593,2.33753804363138,3.62768613784338,6.65957860122194,9.50966880060442,7.89057696911169,4.25017106870819,15.2022805115457,7.14291334642334,3.64426244434412,3.00943262421218,12.9892923801925,16.5717085142584,17.1868654031819,16.6697586873377,16.4419804744954,20.3956352295219,14.1754725048679,16.2115633160719,19.4851235863208,13.4617681055473,3.42498247027783,9.57659696162474,7.17081144167364,9.23805524859517,4.19226325255965,3.12533964365024,5.55616819504038,3.91466608753899,7.38114182061175,6.31743029409494,5.57654459758527,5.65879024158229,5.80577346313271,4.86591158277006,5.51380501973887,5.23923060411381,4.75125736373908,3.6652751888104,7.00546031365621,4.71036544430071,4.80016953339582,3.19456451086807,1.90748951957857,5.0871245821315,5.27012530325851,6.17686637609238,5.85369513192872,7.10288220882176,5.70377278152619,7.2948495315506,4.50813068871862,4.13718825977367,9.41231399290286,5.26785260032284,6.94463799532109,9.49280196164194,6.31615342802603,5.37177635120746,7.46024495068489,5.95596831622692,8.11537424671475
|short_description=p2@Scamp3
}}

Revision as of 04:36, 4 August 2015

Short description:p2@Scamp3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Scamp3_5end
Coexpression cluster:NA
Association with transcript: 16bp_to_ENSMUST00000148881_5end
EntrezGene:24045
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Scamp3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G79.29
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.63
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.36
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.91
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E99.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E712.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F213.81
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.25
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.39
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.70
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E89.62
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.43
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.21
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.92
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.97
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.01
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D19.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.96
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I27.54
Ileum epithelium, pool1.CNhs13199.10252-104B97.98
Ileum epithelium, pool2.CNhs13232.10253-104C17.06
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D88.44
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.60
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B39.36
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B770.42
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C214.17
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B841.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C326.25
Mouse Astrocytes, donor2.CNhs12078.11552-120C415.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C427.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A110.76
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C114.15
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.60
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.31
Mouse Granule cells, donor1.CNhs12131.11713-123C36.27
Mouse Granule cells, donor2.CNhs12357.11731-123E39.52
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C627.79
Mouse Meningeal cells, donor3.CNhs12109.11639-122D141.80
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C714.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E725.71
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D214.21
Mouse Microglia, donor1.CNhs12629.11718-123C824.87
Mouse Microglia, donor2.CNhs12634.11736-123E823.44
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.07
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F125.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D526.28
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.58
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.06
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.78
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.50
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E414.80
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.24
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D622.39
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F620.79
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E114.54
Mouse Schwann, donor1.CNhs12507.11728-123D96.21
Mouse Schwann, donor2.CNhs12573.11746-123F99.75
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.54
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F711.19
Mouse hepatocyte, donor1.CNhs13078.11714-123C414.28
Mouse hepatocyte, donor3.CNhs12615.11637-122C817.27
Mouse hepatocyte, donor6.CNhs13090.11822-124F438.99
Mouse hepatocyte, donor8.CNhs13091.11824-124F625.09
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.44
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.18
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.20
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.56
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.45
accessory axillary lymph node, adult.CNhs10475.1063-29H96.47
adrenal gland, adult.CNhs10508.49-24D76.53
adrenal gland, embryo E14.CNhs11038.406-44C514.23
adrenal gland, embryo E16.CNhs11004.1254-43D614.01
adrenal gland, embryo E17.CNhs11043.1263-45I113.15
adrenal gland, embryo E18.CNhs11026.1262-18F510.40
adrenal gland, neonate N00.CNhs11191.1311-23C18.11
adrenal gland, neonate N25.CNhs11223.1377-27I36.79
amnion, adult pregnant day17.5.CNhs10488.583-22A89.39
aorta, adult.CNhs10498.46-23H110.12
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F55.01
bone (os femoris), neonate N16.CNhs11225.1525-43A63.31
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B26.15
cerebellum, neonate N30.CNhs11135.1395-42I25.24
colon, adult.CNhs10468.36-18H73.32
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.99
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D47.12
corpora quadrigemina, adult.CNhs10501.16-22A410.93
corpus striatum, adult.CNhs10487.19-21D810.07
corpus striatum, neonate N00.CNhs11226.630-43F13.27
cortex, adult.CNhs10473.12-14D514.25
cortex, neonate N30.CNhs11107.1392-42F210.74
diencephalon, adult.CNhs10482.20-12F211.64
diencephalon, neonate N30.CNhs11201.1388-42B210.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.89
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.35
epididymis, adult.CNhs10490.58-23B28.09
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C68.33
eyeball, embryo E14.CNhs10521.399-16E28.28
eyeball, embryo E15.CNhs10593.426-16C98.46
eyeball, embryo E17.CNhs11023.1261-18D45.43
eyeball, neonate N00.CNhs11207.633-15C63.61
eyeball, neonate N01.CNhs11140.1532-43E75.51
eyeball, neonate N02.CNhs11205.1551-44G86.00
eyeball, neonate N16.CNhs11188.777-19A25.69
forelimb, embryo E11.CNhs10596.335-25E212.29
forelimb, embryo E12.CNhs10600.359-14H28.32
forelimb, embryo E13.CNhs10589.384-1E29.85
forelimb, embryo E14.CNhs10577.413-26A810.30
forelimb, embryo E15.CNhs11007.437-20E77.23
forelimb, embryo E17.CNhs10598.1517-43C48.01
forelimb, embryo E18.CNhs11008.1520-43B54.32
gonad, embryo E13.CNhs11044.1564-45I66.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C88.43
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.18
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.82
heart, embryo E11.CNhs10586.331-24E99.32
heart, embryo E12.CNhs11015.353-12F58.68
heart, embryo E13.CNhs11013.376-3I97.38
heart, embryo E14.CNhs10597.403-26D48.52
heart, embryo E15.CNhs11017.431-16C83.94
heart, embryo E16.CNhs11021.457-17C63.86
heart, embryo E17.CNhs11025.479-18E53.26
heart, embryo E18.CNhs11030.1283-20G34.56
heart, neonate N00.CNhs11213.639-21E33.15
heart, neonate N03.CNhs11221.1349-25I24.28
heart, neonate N10.CNhs11118.749-24G13.45
heart, neonate N16.CNhs11209.782-15G14.38
heart, neonate N20.CNhs11127.821-26I64.09
heart, neonate N25.CNhs11196.1351-25D34.61
heart, neonate N30.CNhs11202.1390-42D24.03
hippocampus, adult.CNhs10478.13-16E815.77
hippocampus, neonate N00.CNhs11228.627-43G15.76
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A33.44
intestine, embryo E12.CNhs11019.1251-16I57.68
intestine, embryo E13.CNhs11010.381-16D57.20
intestine, embryo E15.CNhs10602.976-16D87.22
intestine, embryo E16.CNhs10585.463-22H410.89
intestine, embryo E17.CNhs10582.482-18D38.45
intestine, embryo E18.CNhs10526.1289-20F78.56
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E98.56
intestine, neonate N06.CNhs11102.688-20B84.52
intestine, neonate N07.CNhs11095.720-20F22.98
intestine, neonate N10.CNhs11098.755-23A53.90
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E34.76
intestine, neonate N30.CNhs11131.1384-42G15.97
kidney, embryo E14.CNhs10606.411-4I912.71
kidney, embryo E15.CNhs10997.434-16F86.17
kidney, embryo E16.CNhs10584.464-22A515.78
kidney, embryo E17.CNhs11028.483-18I26.11
kidney, embryo E18.CNhs11001.1288-20C76.59
kidney, neonate N00.CNhs11214.646-21G76.10
kidney, neonate N10.CNhs11206.758-6D59.93
kidney, neonate N20.CNhs11113.832-19I19.15
kidney, neonate N25.CNhs11122.1353-25F310.83
kidney, neonate N30.CNhs11203.1385-42H110.98
liver, adult pregnant day01.CNhs10466.508-5B213.64
liver, embryo E12.CNhs10601.355-15F87.01
liver, embryo E13.CNhs10524.378-3H68.06
liver, embryo E14.CNhs10594.409-16E16.75
liver, embryo E15.CNhs10520.433-16D77.10
liver, embryo E16.CNhs10523.462-17F55.79
liver, embryo E17.CNhs10510.481-18A34.58
liver, embryo E18.CNhs10579.499-43G47.48
liver, neonate N00.CNhs11117.641-24F412.48
liver, neonate N03.CNhs11123.1345-25G214.55
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H214.51
liver, neonate N10.CNhs11115.751-24B912.79
liver, neonate N20.CNhs11220.823-25A314.90
liver, neonate N25.CNhs11198.1368-26H118.48
liver, neonate N30.CNhs11106.1382-42D122.67
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G24.74
lung, embryo E14.CNhs10604.404-26F86.84
lung, embryo E15.CNhs11020.432-17C53.90
lung, embryo E16.CNhs10998.458-17B64.69
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I63.09
lung, neonate N00.CNhs11224.640-42C63.51
lung, neonate N06.CNhs11212.683-20E53.15
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E63.67
lung, neonate N20.CNhs11109.822-18A43.44
lung, neonate N25.CNhs11119.1359-25C73.63
lung, neonate N30.CNhs11133.1394-42H23.04
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A113.57
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A16.53
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H24.14
medulla oblongata, adult.CNhs10477.17-12C215.09
medulla oblongata, neonate N30.CNhs11200.1396-42A310.43
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.07
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.04
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.57
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.42
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.60
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.04
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.24
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.36
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.64
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.70
olfactory brain, adult.CNhs10489.18-22I96.43
ovary, adult.CNhs10507.91-2I76.96
ovary, embryo E18.CNhs11040.505-44H76.59
ovary, neonate N00.CNhs11217.1299-22I43.91
oviduct, adult pregnant day01.CNhs10500.988-6G67.26
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F48.74
pancreas, embryo E15.CNhs11042.1556-45F26.65
pancreas, embryo E16.CNhs11003.460-26E57.54
pancreas, embryo E17.CNhs10599.1558-45G36.50
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D79.09
pancreas, neonate N02.CNhs11139.1539-43D85.70
pancreas, neonate N16.CNhs11136.787-43B64.74
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G84.09
pituitary gland, embryo E12.CNhs11018.346-16E69.54
pituitary gland, embryo E13.CNhs11009.370-44C712.55
pituitary gland, embryo E14.CNhs11037.398-44A511.57
pituitary gland, embryo E15.CNhs10592.427-16B910.82
pituitary gland, embryo E16.CNhs11036.449-43F613.73
pituitary gland, embryo E17.CNhs11039.1265-44F510.70
pituitary gland, neonate N00.CNhs11190.1308-22E911.57
placenta, adult pregnant day10.CNhs10472.539-13I712.91
placenta, adult pregnant day17.CNhs10464.577-18G36.14
prostate, adult.CNhs10470.859-1F85.51
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G43.23
skin, neonate N03.CNhs11215.662-22H34.58
skin, neonate N06.CNhs11097.693-20I53.10
skin, neonate N10.CNhs11108.762-6C44.27
small intestine, neonate N16.CNhs11114.790-21I14.96
spinal cord, adult.CNhs10505.24-13C917.06
spleen, adult.CNhs10465.25-2G23.59
spleen, embryo E16.CNhs11035.461-43C15.37
spleen, embryo E18.CNhs11011.1271-21F24.44
spleen, neonate N10.CNhs11116.752-24D11.88
spleen, neonate N20.CNhs11112.824-19H12.46
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.90
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E39.65
stomach, embryo E15.CNhs10603.1252-16G86.10
stomach, embryo E16.CNhs11022.459-17D45.08
stomach, embryo E17.CNhs11006.1035-18D53.97
stomach, embryo E18.CNhs10999.1286-20C64.15
stomach, neonate N03.CNhs11193.1340-24B84.86
stomach, neonate N07.CNhs11210.718-18A95.46
stomach, neonate N25.CNhs11104.1355-25E44.19
stomach, neonate N30.CNhs11134.1386-42I14.15
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F55.98
testis, embryo E15.CNhs11034.443-27C59.60
testis, embryo E16.CNhs11033.470-26G57.58
testis, embryo E17.CNhs11029.486-18I510.20
testis, embryo E18.CNhs11027.503-18G55.41
testis, neonate N00.CNhs11189.1300-22B74.93
testis, neonate N07.CNhs11222.726-26I44.43
testis, neonate N10.CNhs11204.763-44D92.73
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B54.11
thymus, embryo E14.CNhs11041.402-44I49.53
thymus, embryo E15.CNhs11005.430-45I26.78
thymus, embryo E16.CNhs11002.456-26C52.60
thymus, embryo E17.CNhs10581.478-18C13.76
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F83.49
thymus, neonate N03.CNhs11137.2104-43C73.40
thymus, neonate N06.CNhs11197.681-26C43.43
thymus, neonate N07.CNhs11211.713-19D31.75
thymus, neonate N10.CNhs11194.748-24E42.12
thymus, neonate N20.CNhs11186.820-7A22.44
thymus, neonate N25.CNhs11125.1362-25G71.73
thymus, neonate N30.CNhs11132.1393-42G22.34
tongue, adult.CNhs10499.32-1B43.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F79.51
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.89
urinary bladder, adult.CNhs10481.879-12E44.25
uterus, adult pregnant day19.CNhs10497.590-15F515.20
uterus, adult.CNhs10509.92-27E57.14
vagina, adult.CNhs10502.89-27D53.64
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A216.57
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.19
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A416.44
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A520.40
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.49
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.46
whole body, embryo E11.CNhs11014.324-5I83.42
whole body, embryo E12.CNhs10587.857-27C99.58
whole body, embryo E13.CNhs10512.372-23H27.17
whole body, embryo E14.5.CNhs10578.420-27D29.24
whole body, embryo E14.CNhs10519.395-14B14.19
whole body, embryo E16.CNhs10514.453-14F23.13
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.32
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.66
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.51
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.75
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.71
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.27
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.85
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.70
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.27
whole body, embryo E17.5.CNhs10513.490-9F96.94
whole body, embryo E17.CNhs10517.475-3I59.49
whole body, embryo E18.CNhs10516.493-3B36.32
whole body, neonate N00.CNhs10525.657-19C25.37
whole body, neonate N01.CNhs10576.659-23C67.46
whole body, neonate N06.CNhs10515.692-21D15.96
whole body, neonate N10.CNhs10518.761-6B48.12





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system3.10e-1275
central nervous system4.54e-1273
regional part of nervous system2.76e-0954
neural tube4.12e-0952
neural rod4.12e-0952
future spinal cord4.12e-0952
neural keel4.12e-0952
ectoderm-derived structure9.40e-0895
ectoderm9.40e-0895
presumptive ectoderm9.40e-0895
neurectoderm1.02e-0764
neural plate1.02e-0764
presumptive neural plate1.02e-0764
tube4.93e-07114
structure with developmental contribution from neural crest5.75e-0792
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