FFCP PHASE1:Mm9::chr10:19251573..19251584,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=232|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:19251573..19251584,+|id=chr10:19251573..19251584,+|ontology_enrichment_celltype=CL:0000066!7.72e-30!25;CL:0002563!9.57e-26!9;CL:0002251!9.57e-26!9;CL:0002076!1.66e-25!15;CL:0000223!2.24e-25!20;CL:0000239!1.34e-17!6;CL:0000677!1.34e-17!6;CL:0000212!1.34e-17!6;CL:0000584!1.34e-17!6;CL:0000075!5.61e-15!7;CL:0002250!1.03e-09!3;CL:0000473!2.09e-09!3;CL:0000627!2.09e-09!3;CL:0000682!2.09e-09!3;CL:0000063!7.39e-09!66;CL:0000068!2.58e-08!3;CL:0002202!2.58e-08!3;CL:0000069!2.58e-08!3;CL:0002632!2.58e-08!3;CL:0002368!2.58e-08!3;CL:0000307!2.58e-08!3;CL:0000377!2.58e-08!3|ontology_enrichment_celltype_v019_2=CL:0002563,2.02e-47,9;CL:0002251,2.02e-47,9;CL:0000066,1.70e-45,25;CL:0000223,2.22e-36,20;CL:0002076,2.78e-34,15;CL:0000239,6.41e-32,6;CL:0000677,6.41e-32,6;CL:0000584,6.41e-32,6;CL:0000075,2.53e-27,7;CL:0002250,5.76e-17,3;CL:0000682,2.19e-16,3;CL:0002321,3.29e-09,70;CL:0000473,2.54e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!4.50e-30!15;UBERON:0001242!4.56e-30!13;UBERON:0000060!4.56e-30!13;UBERON:0001262!4.56e-30!13;UBERON:0004786!4.56e-30!13;UBERON:0003350!9.57e-26!9;UBERON:0004808!9.57e-26!9;UBERON:0001277!9.57e-26!9;UBERON:0000160!2.27e-21!43;UBERON:0000485!9.70e-21!11;UBERON:0004923!1.09e-17!24;UBERON:0005409!6.20e-16!59;UBERON:0001007!4.53e-13!128;UBERON:0001555!4.53e-13!128;UBERON:0007026!4.53e-13!128;UBERON:0004119!8.96e-13!130;UBERON:0000925!8.96e-13!130;UBERON:0006595!8.96e-13!130;UBERON:0004921!3.39e-12!126;UBERON:0004185!3.39e-12!126;UBERON:0000064!1.19e-08!99;UBERON:0000331!1.51e-08!3;UBERON:0002116!1.51e-08!3;UBERON:0001204!1.51e-08!3;UBERON:0001168!1.51e-08!3;UBERON:0003126!2.58e-08!3;UBERON:0001005!2.58e-08!3;UBERON:0007196!2.58e-08!3;UBERON:0001558!2.58e-08!3;UBERON:0003929!4.37e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.02e-47,9;UBERON:0004808,2.02e-47,9;UBERON:0001277,2.02e-47,9;UBERON:0001242,8.88e-40,13;UBERON:0001262,8.88e-40,13;UBERON:0004786,8.88e-40,13;UBERON:0000485,1.26e-38,11;UBERON:0000344,2.56e-34,15;UBERON:0004923,5.51e-21,24;UBERON:0000160,3.01e-19,31;UBERON:0005409,3.51e-12,47;UBERON:0003929,3.20e-10,55;UBERON:0000490,2.98e-08,66;UBERON:0005911,7.99e-08,69;UBERON:0004921,4.75e-07,114;UBERON:0001007,6.84e-07,116;UBERON:0001555,6.84e-07,116;UBERON:0007026,6.84e-07,116;UBERON:0004119,9.72e-07,118;UBERON:0000925,9.72e-07,118;UBERON:0006595,9.72e-07,118|phase1_expression=0,17.4487703819681,20.0199665331396,48.3942738090928,59.6065918636153,28.875234768845,43.2183385101723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0,21.2465826722557,19.8150518233174,18.3150547783006,0.950117097281869,0.252030129759931,1.33038306393183,0,0,0,59.7922852885138,12.9663023379624,78.1968634484874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.24661221754194,0,3.39985666853875,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,1.01104889002957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.793351699990633,0,0,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:19251573..19251584,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=232 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:19251573..19251584,+ | |||
|description=CAGE_peak_at_chr10:19251573..19251584,+ | |||
|id=chr10:19251573..19251584,+ | |||
|ontology_enrichment_celltype=CL:0000066!7.72e-30!25;CL:0002563!9.57e-26!9;CL:0002251!9.57e-26!9;CL:0002076!1.66e-25!15;CL:0000223!2.24e-25!20;CL:0000239!1.34e-17!6;CL:0000677!1.34e-17!6;CL:0000212!1.34e-17!6;CL:0000584!1.34e-17!6;CL:0000075!5.61e-15!7;CL:0002250!1.03e-09!3;CL:0000473!2.09e-09!3;CL:0000627!2.09e-09!3;CL:0000682!2.09e-09!3;CL:0000063!7.39e-09!66;CL:0000068!2.58e-08!3;CL:0002202!2.58e-08!3;CL:0000069!2.58e-08!3;CL:0002632!2.58e-08!3;CL:0002368!2.58e-08!3;CL:0000307!2.58e-08!3;CL:0000377!2.58e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.02e-47,9;CL:0002251,2.02e-47,9;CL:0000066,1.70e-45,25;CL:0000223,2.22e-36,20;CL:0002076,2.78e-34,15;CL:0000239,6.41e-32,6;CL:0000677,6.41e-32,6;CL:0000584,6.41e-32,6;CL:0000075,2.53e-27,7;CL:0002250,5.76e-17,3;CL:0000682,2.19e-16,3;CL:0002321,3.29e-09,70;CL:0000473,2.54e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.50e-30!15;UBERON:0001242!4.56e-30!13;UBERON:0000060!4.56e-30!13;UBERON:0001262!4.56e-30!13;UBERON:0004786!4.56e-30!13;UBERON:0003350!9.57e-26!9;UBERON:0004808!9.57e-26!9;UBERON:0001277!9.57e-26!9;UBERON:0000160!2.27e-21!43;UBERON:0000485!9.70e-21!11;UBERON:0004923!1.09e-17!24;UBERON:0005409!6.20e-16!59;UBERON:0001007!4.53e-13!128;UBERON:0001555!4.53e-13!128;UBERON:0007026!4.53e-13!128;UBERON:0004119!8.96e-13!130;UBERON:0000925!8.96e-13!130;UBERON:0006595!8.96e-13!130;UBERON:0004921!3.39e-12!126;UBERON:0004185!3.39e-12!126;UBERON:0000064!1.19e-08!99;UBERON:0000331!1.51e-08!3;UBERON:0002116!1.51e-08!3;UBERON:0001204!1.51e-08!3;UBERON:0001168!1.51e-08!3;UBERON:0003126!2.58e-08!3;UBERON:0001005!2.58e-08!3;UBERON:0007196!2.58e-08!3;UBERON:0001558!2.58e-08!3;UBERON:0003929!4.37e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.02e-47,9;UBERON:0004808,2.02e-47,9;UBERON:0001277,2.02e-47,9;UBERON:0001242,8.88e-40,13;UBERON:0001262,8.88e-40,13;UBERON:0004786,8.88e-40,13;UBERON:0000485,1.26e-38,11;UBERON:0000344,2.56e-34,15;UBERON:0004923,5.51e-21,24;UBERON:0000160,3.01e-19,31;UBERON:0005409,3.51e-12,47;UBERON:0003929,3.20e-10,55;UBERON:0000490,2.98e-08,66;UBERON:0005911,7.99e-08,69;UBERON:0004921,4.75e-07,114;UBERON:0001007,6.84e-07,116;UBERON:0001555,6.84e-07,116;UBERON:0007026,6.84e-07,116;UBERON:0004119,9.72e-07,118;UBERON:0000925,9.72e-07,118;UBERON:0006595,9.72e-07,118 | |||
|phase1_expression=0,17.4487703819681,20.0199665331396,48.3942738090928,59.6065918636153,28.875234768845,43.2183385101723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0,21.2465826722557,19.8150518233174,18.3150547783006,0.950117097281869,0.252030129759931,1.33038306393183,0,0,0,59.7922852885138,12.9663023379624,78.1968634484874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.24661221754194,0,3.39985666853875,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,1.01104889002957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.793351699990633,0,0,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:19251573..19251584,+ | |||
}} |
Latest revision as of 05:02, 4 August 2015
Short description: | p@chr10:19251573..19251584, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:19251573..19251584, + |
Coexpression cluster: | MCL_coexpression_mm9:232 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.02e-47 | 9 |
epithelial cell of alimentary canal | 2.02e-47 | 9 |
epithelial cell | 1.70e-45 | 25 |
endodermal cell | 2.22e-36 | 20 |
endo-epithelial cell | 2.78e-34 | 15 |
brush border epithelial cell | 6.41e-32 | 6 |
gut absorptive cell | 6.41e-32 | 6 |
enterocyte | 6.41e-32 | 6 |
columnar/cuboidal epithelial cell | 2.53e-27 | 7 |
intestinal crypt stem cell | 5.76e-17 | 3 |
M cell of gut | 2.19e-16 | 3 |
embryonic cell | 3.29e-09 | 70 |
defensive cell | 2.54e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 2.02e-47 | 9 |
gastrointestinal system epithelium | 2.02e-47 | 9 |
intestinal epithelium | 2.02e-47 | 9 |
intestinal mucosa | 8.88e-40 | 13 |
wall of intestine | 8.88e-40 | 13 |
gastrointestinal system mucosa | 8.88e-40 | 13 |
simple columnar epithelium | 1.26e-38 | 11 |
mucosa | 2.56e-34 | 15 |
organ component layer | 5.51e-21 | 24 |
intestine | 3.01e-19 | 31 |
gastrointestinal system | 3.51e-12 | 47 |
gut epithelium | 3.20e-10 | 55 |
unilaminar epithelium | 2.98e-08 | 66 |
endo-epithelium | 7.99e-08 | 69 |
subdivision of digestive tract | 4.75e-07 | 114 |
digestive system | 6.84e-07 | 116 |
digestive tract | 6.84e-07 | 116 |
primitive gut | 6.84e-07 | 116 |
endoderm-derived structure | 9.72e-07 | 118 |
endoderm | 9.72e-07 | 118 |
presumptive endoderm | 9.72e-07 | 118 |