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FFCP PHASE1:Mm9::chr3:89534657..89534708,+: Difference between revisions

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{{FFCP|EntrezGene=56417|HGNC=|MCL_coexpression_id=542|UniProt=Q99MU3|association_with_transcript=0bp_to_ENSMUST00000029563,ENSMUST00000107405,ENSMUST00000118341,ENSMUST00000121094_5end|description=CAGE_peak_2_at_Adar_5end|id=chr3:89534657..89534708,+|ontology_enrichment_celltype=CL:0002031!1.79e-08!25;CL:0000219!4.84e-07!54;CL:0002320!7.70e-07!46;CL:0000134!7.70e-07!46;CL:0000063!8.27e-07!66|ontology_enrichment_celltype_v019_2=CL:0002031,1.58e-08,25;CL:0000219,4.46e-07,54;CL:0002320,7.06e-07,46;CL:0000134,7.06e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!3.15e-17!130;UBERON:0000925!3.15e-17!130;UBERON:0006595!3.15e-17!130;UBERON:0002405!7.58e-17!70;UBERON:0001007!1.84e-16!128;UBERON:0001555!1.84e-16!128;UBERON:0007026!1.84e-16!128;UBERON:0004921!7.54e-16!126;UBERON:0004185!7.54e-16!126;UBERON:0002193!2.83e-13!48;UBERON:0002390!3.88e-12!45;UBERON:0003061!3.88e-12!45;UBERON:0005911!1.12e-10!69;UBERON:0003929!2.01e-10!55;UBERON:0005057!2.87e-10!51;UBERON:0000490!4.77e-10!66;UBERON:0000926!1.67e-09!193;UBERON:0004120!1.67e-09!193;UBERON:0006603!1.67e-09!193;UBERON:0000077!3.10e-09!97;UBERON:0003104!3.34e-09!131;UBERON:0009142!3.34e-09!131;UBERON:0001041!3.28e-08!92;UBERON:0004923!8.14e-08!24;UBERON:0003081!1.93e-07!88;UBERON:0002530!2.36e-07!65;UBERON:0004177!4.42e-07!29;UBERON:0002384!7.70e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0004119,6.04e-19,118;UBERON:0000925,6.04e-19,118;UBERON:0006595,6.04e-19,118;UBERON:0001007,3.76e-18,116;UBERON:0001555,3.76e-18,116;UBERON:0007026,3.76e-18,116;UBERON:0004921,1.60e-17,114;UBERON:0002193,2.48e-13,48;UBERON:0002405,2.48e-13,48;UBERON:0002390,3.42e-12,45;UBERON:0003061,3.42e-12,45;UBERON:0005911,1.02e-10,69;UBERON:0003929,1.81e-10,55;UBERON:0000490,4.33e-10,66;UBERON:0001041,1.36e-09,80;UBERON:0000077,1.66e-08,35;UBERON:0005409,3.87e-08,47;UBERON:0004923,8.08e-08,24;UBERON:0002530,2.18e-07,65;UBERON:0004177,3.97e-07,29;UBERON:0005057,3.97e-07,29;UBERON:0000160,4.27e-07,31;UBERON:0003081,4.94e-07,87;UBERON:0002384,7.06e-07,46|phase1_expression=3.20297694209588,28.6159834264276,20.0199665331396,37.5055622020469,43.5779285053322,15.9485308316295,17.7545606852599,58.7511121659172,23.5117165993283,27.3855495796732,16.265706981423,15.2364823681093,62.3170656949589,57.8723064013763,39.3069518942482,52.4410942539649,40.5745889314325,67.9820966347002,60.4674652201308,49.6535892603695,13.7770130044733,18.2695350209629,14.6271881917804,18.7191134668286,17.6645146421721,17.8011908875656,18.5227658348402,16.5912849168135,21.6626698180266,24.1948924569534,11.3082560434205,3.17515336729816,4.92051830067656,0,10.6875099307972,9.97407872150954,9.59595974433135,65.2909343949576,43.7547792933328,52.8758981413536,62.9407692193185,65.5723665560108,54.8626698925204,4.28049181116963,4.66333883609767,2.38610777810186,23.4717403304412,4.14247797122848,7.0299578475031,11.8602238435313,14.1386285841616,8.62515386189829,50.8381296354941,55.8528849348735,64.8661032344956,9.77585856936598,9.16907007804022,14.9544906760458,0.202316460859598,0,0.633831403506179,4.40497891689872,40.9075606211124,26.0970918011606,31.6437236021432,29.1296847127901,14.6804054154018,9.98967593836042,0.622137673850866,0.945041568321835,0.630974884054146,1.71390590642282,1.98781686856452,0.122490799214954,0,0.919218786610021,0,2.042997409363,0.614426133024974,0,0.182975287204819,0.52091337055676,1.11673199600552,1.12552522006336,2.75036845998258,4.12480019663135,0.996601765593721,0.745597783301202,11.0560242266449,11.638020256445,26.957397449256,11.185510400758,3.39985666853875,9.71465744948071,23.3919510281161,17.0250217096988,12.9208866521212,2.72688516124892,1.81850203222008,2.12003744706204,2.39433813620357,3.84979432242953,2.54805239706646,0,5.84525810730278,5.32055717497707,4.54972000513305,15.186456002635,66.288098213676,14.9926560455473,3.12273588179045,4.87144765299426,3.45923245884088,12.9621470875255,13.9930561491489,10.6816602630224,23.7307169024999,18.074919614989,38.0382537338446,5.82360659810673,15.4589062922275,17.9403843660032,11.1835056730873,1.75668478206928,0.83778682725382,29.8884754594052,10.3041007075091,8.39863823390771,6.86179226194549,1.9472783122627,1.83000241127451,1.00523481690292,1.04294592115366,1.53429274398198,2.28566849015516,0.811206315338788,4.58277137326423,15.9240922380919,15.9215337813215,9.04899980311838,1.17108398666433,1.14951052216736,1.0803727788321,1.35634336052144,3.60593445502038,1.7935920839879,2.71735001223214,5.69147415625834,0.862271971731369,0.378212160335639,2.11141348996739,2.41115305670332,2.22437799380478,2.78601733217733,5.55611768301447,1.59227413454795,6.31991868581911,5.40430604940902,8.52490498186778,1.86413195281952,2.57978665979206,2.52086886045421,3.55117103377815,1.77087808572663,2.46827380619805,3.0229412817553,6.17028823219124,7.82327793860036,5.43047504714485,6.07419617092652,8.83650024049827,9.35679919522127,11.1970558798436,10.6023070820694,1.89260953707715,2.57261530948211,41.9631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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:56417
|HGNC=
|MCL_coexpression_id=542
|TSSclassifier=NA
|UniProt=uniprot:Q99MU3
|association_with_transcript=0bp_to_ENSMUST00000029563,ENSMUST00000107405,ENSMUST00000118341,ENSMUST00000121094_5end
|cluster_id=chr3:89534657..89534708,+
|description=CAGE_peak_2_at_Adar_5end
|id=chr3:89534657..89534708,+
|ontology_enrichment_celltype=CL:0002031!1.79e-08!25;CL:0000219!4.84e-07!54;CL:0002320!7.70e-07!46;CL:0000134!7.70e-07!46;CL:0000063!8.27e-07!66
|ontology_enrichment_celltype_v019_2=CL:0002031,1.58e-08,25;CL:0000219,4.46e-07,54;CL:0002320,7.06e-07,46;CL:0000134,7.06e-07,46
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!3.15e-17!130;UBERON:0000925!3.15e-17!130;UBERON:0006595!3.15e-17!130;UBERON:0002405!7.58e-17!70;UBERON:0001007!1.84e-16!128;UBERON:0001555!1.84e-16!128;UBERON:0007026!1.84e-16!128;UBERON:0004921!7.54e-16!126;UBERON:0004185!7.54e-16!126;UBERON:0002193!2.83e-13!48;UBERON:0002390!3.88e-12!45;UBERON:0003061!3.88e-12!45;UBERON:0005911!1.12e-10!69;UBERON:0003929!2.01e-10!55;UBERON:0005057!2.87e-10!51;UBERON:0000490!4.77e-10!66;UBERON:0000926!1.67e-09!193;UBERON:0004120!1.67e-09!193;UBERON:0006603!1.67e-09!193;UBERON:0000077!3.10e-09!97;UBERON:0003104!3.34e-09!131;UBERON:0009142!3.34e-09!131;UBERON:0001041!3.28e-08!92;UBERON:0004923!8.14e-08!24;UBERON:0003081!1.93e-07!88;UBERON:0002530!2.36e-07!65;UBERON:0004177!4.42e-07!29;UBERON:0002384!7.70e-07!46
|ontology_enrichment_uberon_v019_2=UBERON:0004119,6.04e-19,118;UBERON:0000925,6.04e-19,118;UBERON:0006595,6.04e-19,118;UBERON:0001007,3.76e-18,116;UBERON:0001555,3.76e-18,116;UBERON:0007026,3.76e-18,116;UBERON:0004921,1.60e-17,114;UBERON:0002193,2.48e-13,48;UBERON:0002405,2.48e-13,48;UBERON:0002390,3.42e-12,45;UBERON:0003061,3.42e-12,45;UBERON:0005911,1.02e-10,69;UBERON:0003929,1.81e-10,55;UBERON:0000490,4.33e-10,66;UBERON:0001041,1.36e-09,80;UBERON:0000077,1.66e-08,35;UBERON:0005409,3.87e-08,47;UBERON:0004923,8.08e-08,24;UBERON:0002530,2.18e-07,65;UBERON:0004177,3.97e-07,29;UBERON:0005057,3.97e-07,29;UBERON:0000160,4.27e-07,31;UBERON:0003081,4.94e-07,87;UBERON:0002384,7.06e-07,46
|phase1_expression=3.20297694209588,28.6159834264276,20.0199665331396,37.5055622020469,43.5779285053322,15.9485308316295,17.7545606852599,58.7511121659172,23.5117165993283,27.3855495796732,16.265706981423,15.2364823681093,62.3170656949589,57.8723064013763,39.3069518942482,52.4410942539649,40.5745889314325,67.9820966347002,60.4674652201308,49.6535892603695,13.7770130044733,18.2695350209629,14.6271881917804,18.7191134668286,17.6645146421721,17.8011908875656,18.5227658348402,16.5912849168135,21.6626698180266,24.1948924569534,11.3082560434205,3.17515336729816,4.92051830067656,0,10.6875099307972,9.97407872150954,9.59595974433135,65.2909343949576,43.7547792933328,52.8758981413536,62.9407692193185,65.5723665560108,54.8626698925204,4.28049181116963,4.66333883609767,2.38610777810186,23.4717403304412,4.14247797122848,7.0299578475031,11.8602238435313,14.1386285841616,8.62515386189829,50.8381296354941,55.8528849348735,64.8661032344956,9.77585856936598,9.16907007804022,14.9544906760458,0.202316460859598,0,0.633831403506179,4.40497891689872,40.9075606211124,26.0970918011606,31.6437236021432,29.1296847127901,14.6804054154018,9.98967593836042,0.622137673850866,0.945041568321835,0.630974884054146,1.71390590642282,1.98781686856452,0.122490799214954,0,0.919218786610021,0,2.042997409363,0.614426133024974,0,0.182975287204819,0.52091337055676,1.11673199600552,1.12552522006336,2.75036845998258,4.12480019663135,0.996601765593721,0.745597783301202,11.0560242266449,11.638020256445,26.957397449256,11.185510400758,3.39985666853875,9.71465744948071,23.3919510281161,17.0250217096988,12.9208866521212,2.72688516124892,1.81850203222008,2.12003744706204,2.39433813620357,3.84979432242953,2.54805239706646,0,5.84525810730278,5.32055717497707,4.54972000513305,15.186456002635,66.288098213676,14.9926560455473,3.12273588179045,4.87144765299426,3.45923245884088,12.9621470875255,13.9930561491489,10.6816602630224,23.7307169024999,18.074919614989,38.0382537338446,5.82360659810673,15.4589062922275,17.9403843660032,11.1835056730873,1.75668478206928,0.83778682725382,29.8884754594052,10.3041007075091,8.39863823390771,6.86179226194549,1.9472783122627,1.83000241127451,1.00523481690292,1.04294592115366,1.53429274398198,2.28566849015516,0.811206315338788,4.58277137326423,15.9240922380919,15.9215337813215,9.04899980311838,1.17108398666433,1.14951052216736,1.0803727788321,1.35634336052144,3.60593445502038,1.7935920839879,2.71735001223214,5.69147415625834,0.862271971731369,0.378212160335639,2.11141348996739,2.41115305670332,2.22437799380478,2.78601733217733,5.55611768301447,1.59227413454795,6.31991868581911,5.40430604940902,8.52490498186778,1.86413195281952,2.57978665979206,2.52086886045421,3.55117103377815,1.77087808572663,2.46827380619805,3.0229412817553,6.17028823219124,7.82327793860036,5.43047504714485,6.07419617092652,8.83650024049827,9.35679919522127,11.1970558798436,10.6023070820694,1.89260953707715,2.57261530948211,41.9631854389423,49.1878053994192,1.2797295032114,5.10920678092965,6.82997545007095,7.86565746031036,13.3426826306922,20.3541419940438,28.9462727542152,14.822905925161,23.6255096272253,26.8591237255554,24.5654749770091,35.0539569375146,23.1267713365923,22.7021051509979,1.89667900953082,2.39921876480431,5.63538678365402,3.25842124552503,7.17624202520215,10.1696938840962,9.42224403151434,11.3659813944294,13.815888050041,8.63780147452604,18.9729681335775,9.34332592010127,12.9728936774714,11.9176919563972,13.7944882544182,15.1941610644023,13.4951701444152,44.3052051674248,24.6445544698054,13.453509246216,24.4405951096503,15.6299198020771,12.4815069245824,13.8918382870911,16.6839594575378,14.473305640901,31.5927955184894,1.13694847062291,2.28150967018836,3.05541154395339,3.52035372432753,10.0503754465089,17.853273066451,23.0257704472203,10.8768249433272,14.3952048271704,12.756381492599,23.2685906896348,26.2481172436161,17.9364832641074,78.4114676484216,108.237231079923,37.8658490224658,24.0064969285117,2.88991061978026,1.87538698547525,0.819674726883377,9.08895337935743,2.2085575359138,2.73307121007647,1.50796378412959,2.62865677747807,2.89638276307112,2.26461224631066,4.45291771842384,1.16902343164525,1.18586333383957,2.57057053137446,12.7746076687442,6.7664929393557,5.53815661802159,18.1467135269789,9.2921596837974,2.91336763385978,3.02323556964751,2.45186603682668,3.83892460745005,7.37844355065426,13.9551278310839,8.72480950746013,8.55593708123331,8.53299246426703,5.27093042874994,7.21948802737308,11.5749465956288,3.42116078659489,3.62204314591713,2.35770738534752,4.78818630834139,5.35106452806212,2.46823530903181,11.5696680663548,21.8244688499251,23.513359865884,18.7449138346718,6.43056386471772,6.29711264114032,5.72972786817481,4.29740438411291,2.79039529566604,32.9373345391731,2.41052892613663,48.0147175041966,7.01715351074956,38.1500726381606,28.066900093699,37.1808299401188,44.1541874288589,15.1280802694531,18.1936888020755,12.4379976423981,11.4560474161814,2.21435195506795,3.04979200690273,5.07625101862466,6.27264888043406,11.5732158785474,8.09186078308924,12.8112856374271,15.7053565190418,18.146096260851,21.1255366449555,0.56369293868419,2.24274819065968,1.82004339502807,1.75006069509643,4.90807329215378,6.9272011451219,5.28107573905893,2.604087696879,2.9360616439199,4.59009829569411,2.01621004380506,39.5013900785223,5.27085559754427,9.14127518766963,16.6298653411578,17.1865627840782,22.6496744450642,24.1592853535137,25.2549091468527,21.7077867388517,23.01445560981,21.3751512490102,29.7246536256245,29.9218827501425,34.4786861435628,8.61575457737803,6.43759264784788,1.97370484540847,2.51826924546118,16.227925898704,27.0262764649702,39.7439024659965,9.00347192132076,18.5581678493084,0,1.38097570952153,0,0.515559547031063,0.685082519770642,0,0.675022500231806,1.80128481289688,0.453142408984205,1.55328093525546,0.62272408550506,3.19219898720825,2.39027048055788,5.34834777550247,3.14419743941973,3.49302666055027,5.778414922842,4.32673620201678,7.06022261101994,4.29585259998456,4.30914809813408,3.2066478035633,5.80577346313271,5.50616310681876,6.03072424033939,2.85776214769844,6.83717523074647,5.20854895252004,7.41754621445952,5.4463600449727,7.54312355247914,6.38912902173615,5.7224685587357,4.36039249896986,5.74067220533517,5.24610568928394,6.40247905054704,5.5244639401947,5.29636043998861,3.36685362994643,5.21994079746366,5.22073756590486,3.6830793885272,4.64810523557898,4.62975866354739,1.99848462350357,12.3983752476066,8.59484216193193,7.84282161482258,5.07360263974886,7.18790290423307
|short_description=p2@Adar
}}

Revision as of 05:14, 4 August 2015

Short description:p2@Adar
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Adar_5end
Coexpression cluster:MCL_coexpression_mm9:542
Association with transcript: 0bp_to_ENSMUST00000029563, ENSMUST00000107405, ENSMUST00000118341, ENSMUST00000121094_5end
EntrezGene:56417
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Adar

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.20
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I528.62
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I620.02
CD326+ enterocyte, pool1.CNhs13542.11848-124I337.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I443.58
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I715.95
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I817.75
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E958.75
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E723.51
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F227.39
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E616.27
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F115.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E462.32
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E857.87
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A139.31
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A352.44
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A540.57
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A267.98
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A460.47
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A649.65
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.78
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H218.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I914.63
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D118.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D217.66
GP2+ M cell, pool1.CNhs13228.11845-124H917.80
GP2+ M cell, pool2.CNhs13231.11846-124I118.52
GP2+ M cell, pool3.CNhs13240.11847-124I216.59
Ileum epithelium, pool1.CNhs13199.10252-104B921.66
Ileum epithelium, pool2.CNhs13232.10253-104C124.19
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C811.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F510.69
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F69.97
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F79.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G865.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H143.75
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H352.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G962.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H265.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H454.86
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.66
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.39
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B723.47
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.14
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.03
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C311.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C414.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A250.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I955.85
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A164.87
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C19.78
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E19.17
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C514.95
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.40
Mouse Meningeal cells, donor3.CNhs12109.11639-122D140.91
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C726.10
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E731.64
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D229.13
Mouse Microglia, donor1.CNhs12629.11718-123C814.68
Mouse Microglia, donor2.CNhs12634.11736-123E89.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D911.06
Mouse Schwann, donor2.CNhs12573.11746-123F911.64
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G326.96
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F711.19
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.71
Mouse hepatocyte, donor6.CNhs13090.11822-124F423.39
Mouse hepatocyte, donor8.CNhs13091.11824-124F617.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A712.92
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.19
accessory axillary lymph node, adult.CNhs10475.1063-29H966.29
adrenal gland, adult.CNhs10508.49-24D714.99
adrenal gland, embryo E14.CNhs11038.406-44C53.12
adrenal gland, embryo E16.CNhs11004.1254-43D64.87
adrenal gland, embryo E17.CNhs11043.1263-45I13.46
adrenal gland, embryo E18.CNhs11026.1262-18F512.96
adrenal gland, neonate N00.CNhs11191.1311-23C113.99
adrenal gland, neonate N25.CNhs11223.1377-27I310.68
amnion, adult pregnant day17.5.CNhs10488.583-22A823.73
aorta, adult.CNhs10498.46-23H118.07
bone (os femoris), adult.CNhs10483.56-12G238.04
bone (os femoris), neonate N02.CNhs11227.1985-43F55.82
bone (os femoris), neonate N16.CNhs11225.1525-43A615.46
bone (os femoris), neonate N20.CNhs11195.1350-25C317.94
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H729.89
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C710.30
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D18.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.86
corpora quadrigemina, adult.CNhs10501.16-22A41.95
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.58
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A215.92
epididymis, adult.CNhs10490.58-23B215.92
eyeball, adult.CNhs10484.31-12G49.05
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C63.61
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G82.72
eyeball, neonate N16.CNhs11188.777-19A25.69
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B55.56
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C86.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.40
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D58.52
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I92.52
heart, embryo E14.CNhs10597.403-26D43.55
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C62.47
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G36.17
heart, neonate N00.CNhs11213.639-21E37.82
heart, neonate N03.CNhs11221.1349-25I25.43
heart, neonate N10.CNhs11118.749-24G16.07
heart, neonate N16.CNhs11209.782-15G18.84
heart, neonate N20.CNhs11127.821-26I69.36
heart, neonate N25.CNhs11196.1351-25D311.20
heart, neonate N30.CNhs11202.1390-42D210.60
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G12.57
intestinal mucosa, adult.CNhs10506.860-29I341.96
intestine, adult.CNhs10496.178-9A349.19
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D55.11
intestine, embryo E15.CNhs10602.976-16D86.83
intestine, embryo E16.CNhs10585.463-22H47.87
intestine, embryo E17.CNhs10582.482-18D313.34
intestine, embryo E18.CNhs10526.1289-20F720.35
intestine, neonate N00.CNhs11126.644-26D128.95
intestine, neonate N01.CNhs11192.1322-23E914.82
intestine, neonate N06.CNhs11102.688-20B823.63
intestine, neonate N07.CNhs11095.720-20F226.86
intestine, neonate N10.CNhs11098.755-23A524.57
intestine, neonate N20.CNhs11187.827-18D135.05
intestine, neonate N25.CNhs11121.1352-25E323.13
intestine, neonate N30.CNhs11131.1384-42G122.70
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F82.40
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C77.18
kidney, neonate N00.CNhs11214.646-21G710.17
kidney, neonate N10.CNhs11206.758-6D59.42
kidney, neonate N20.CNhs11113.832-19I111.37
kidney, neonate N25.CNhs11122.1353-25F313.82
kidney, neonate N30.CNhs11203.1385-42H18.64
liver, adult pregnant day01.CNhs10466.508-5B218.97
liver, embryo E12.CNhs10601.355-15F89.34
liver, embryo E13.CNhs10524.378-3H612.97
liver, embryo E14.CNhs10594.409-16E111.92
liver, embryo E15.CNhs10520.433-16D713.79
liver, embryo E16.CNhs10523.462-17F515.19
liver, embryo E17.CNhs10510.481-18A313.50
liver, embryo E18.CNhs10579.499-43G444.31
liver, neonate N00.CNhs11117.641-24F424.64
liver, neonate N03.CNhs11123.1345-25G213.45
liver, neonate N06.CNhs11101.684-20A824.44
liver, neonate N07.CNhs11103.716-20H215.63
liver, neonate N10.CNhs11115.751-24B912.48
liver, neonate N20.CNhs11220.823-25A313.89
liver, neonate N25.CNhs11198.1368-26H116.68
liver, neonate N30.CNhs11106.1382-42D114.47
lung, adult.CNhs10474.28-22B131.59
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F82.28
lung, embryo E15.CNhs11020.432-17C53.06
lung, embryo E16.CNhs10998.458-17B63.52
lung, embryo E17.CNhs10605.480-44A610.05
lung, embryo E18.CNhs10583.1287-20I617.85
lung, neonate N00.CNhs11224.640-42C623.03
lung, neonate N06.CNhs11212.683-20E510.88
lung, neonate N07.CNhs11111.715-19A314.40
lung, neonate N10.CNhs11219.750-23E612.76
lung, neonate N20.CNhs11109.822-18A423.27
lung, neonate N25.CNhs11119.1359-25C726.25
lung, neonate N30.CNhs11133.1394-42H217.94
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A178.41
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1108.24
mammary gland, adult lactating day02.CNhs10480.595-22B637.87
mammary gland, adult pregnant day19.CNhs10476.588-5H224.01
medulla oblongata, adult.CNhs10477.17-12C22.89
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.09
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.63
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I712.77
ovary, embryo E18.CNhs11040.505-44H76.77
ovary, neonate N00.CNhs11217.1299-22I45.54
oviduct, adult pregnant day01.CNhs10500.988-6G618.15
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G33.84
pancreas, embryo E18.CNhs10580.1535-43I77.38
pancreas, neonate N00.CNhs11105.645-26G913.96
pancreas, neonate N01.CNhs11138.1531-43D78.72
pancreas, neonate N02.CNhs11139.1539-43D88.56
pancreas, neonate N16.CNhs11136.787-43B68.53
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G811.57
pituitary gland, embryo E12.CNhs11018.346-16E63.42
pituitary gland, embryo E13.CNhs11009.370-44C73.62
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B94.79
pituitary gland, embryo E16.CNhs11036.449-43F65.35
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E911.57
placenta, adult pregnant day10.CNhs10472.539-13I721.82
placenta, adult pregnant day17.CNhs10464.577-18G323.51
prostate, adult.CNhs10470.859-1F818.74
skin, adult.CNhs10492.30-1C36.43
skin, neonate N00.CNhs11124.650-25G46.30
skin, neonate N03.CNhs11215.662-22H35.73
skin, neonate N06.CNhs11097.693-20I54.30
skin, neonate N10.CNhs11108.762-6C42.79
small intestine, neonate N16.CNhs11114.790-21I132.94
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G248.01
spleen, embryo E16.CNhs11035.461-43C17.02
spleen, embryo E18.CNhs11011.1271-21F238.15
spleen, neonate N10.CNhs11116.752-24D128.07
spleen, neonate N20.CNhs11112.824-19H137.18
spleen, neonate N25.CNhs11099.1354-25G344.15
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C615.13
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C918.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D312.44
stomach, adult.CNhs10503.33-1H611.46
stomach, embryo E12.CNhs10588.356-43E32.21
stomach, embryo E15.CNhs10603.1252-16G83.05
stomach, embryo E16.CNhs11022.459-17D45.08
stomach, embryo E17.CNhs11006.1035-18D56.27
stomach, embryo E18.CNhs10999.1286-20C611.57
stomach, neonate N03.CNhs11193.1340-24B88.09
stomach, neonate N07.CNhs11210.718-18A912.81
stomach, neonate N25.CNhs11104.1355-25E415.71
stomach, neonate N30.CNhs11134.1386-42I118.15
submandibular gland, adult.CNhs10469.59-29C121.13
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I54.91
testis, embryo E18.CNhs11027.503-18G56.93
testis, neonate N00.CNhs11189.1300-22B75.28
testis, neonate N07.CNhs11222.726-26I42.60
testis, neonate N10.CNhs11204.763-44D92.94
testis, neonate N20.CNhs11110.839-18H34.59
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B539.50
thymus, embryo E14.CNhs11041.402-44I45.27
thymus, embryo E15.CNhs11005.430-45I29.14
thymus, embryo E16.CNhs11002.456-26C516.63
thymus, embryo E17.CNhs10581.478-18C117.19
thymus, embryo E18.CNhs10595.1273-19G422.65
thymus, neonate N02.CNhs11181.1541-43F824.16
thymus, neonate N03.CNhs11137.2104-43C725.25
thymus, neonate N06.CNhs11197.681-26C421.71
thymus, neonate N07.CNhs11211.713-19D323.01
thymus, neonate N10.CNhs11194.748-24E421.38
thymus, neonate N20.CNhs11186.820-7A229.72
thymus, neonate N25.CNhs11125.1362-25G729.92
thymus, neonate N30.CNhs11132.1393-42G234.48
tongue, adult.CNhs10499.32-1B48.62
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.97
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.52
urinary bladder, adult.CNhs10481.879-12E416.23
uterus, adult pregnant day19.CNhs10497.590-15F527.03
uterus, adult.CNhs10509.92-27E539.74
vagina, adult.CNhs10502.89-27D59.00
vesicular gland, adult.CNhs10491.51-27F818.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.30
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.21
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.45
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.54
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.39
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.36
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.74
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.22
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.22
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.65
whole body, embryo E17.5.CNhs10513.490-9F94.63
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B312.40
whole body, neonate N00.CNhs10525.657-19C28.59
whole body, neonate N01.CNhs10576.659-23C67.84
whole body, neonate N06.CNhs10515.692-21D15.07
whole body, neonate N10.CNhs10518.761-6B47.19





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hematopoietic lineage restricted progenitor cell1.58e-0825
motile cell4.46e-0754
connective tissue cell7.06e-0746
mesenchymal cell7.06e-0746

Uber anatomy
Ontology termp-valuen
endoderm-derived structure6.04e-19118
endoderm6.04e-19118
presumptive endoderm6.04e-19118
digestive system3.76e-18116
digestive tract3.76e-18116
primitive gut3.76e-18116
subdivision of digestive tract1.60e-17114
hemolymphoid system2.48e-1348
immune system2.48e-1348
hematopoietic system3.42e-1245
blood island3.42e-1245
endo-epithelium1.02e-1069
gut epithelium1.81e-1055
unilaminar epithelium4.33e-1066
foregut1.36e-0980
mixed endoderm/mesoderm-derived structure1.66e-0835
gastrointestinal system3.87e-0847
organ component layer8.08e-0824
gland2.18e-0765
hemopoietic organ3.97e-0729
immune organ3.97e-0729
intestine4.27e-0731
lateral plate mesoderm4.94e-0787
connective tissue7.06e-0746
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