FFCP PHASE1:Mm9::chr11:86571419..86571430,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:86571419..86571430,+ | |||
|description=CAGE_peak_at_chr11:86571419..86571430,+ | |description=CAGE_peak_at_chr11:86571419..86571430,+ | ||
|id=chr11:86571419..86571430,+ | |id=chr11:86571419..86571430,+ | ||
|ontology_enrichment_celltype=CL:0000063!7.91e-13!66;CL:0000144!5.27e-12!121;CL:0000012!5.27e-12!121;CL:0002563!1.87e-10!9;CL:0002251!1.87e-10!9;CL:0002371!2.44e-10!118;CL:0000034!6.18e-09!97;CL:0000548!1.65e-08!115;CL:0000004!1.65e-08!115;CL:0000255!1.65e-08!115;CL:0000723!4.48e-08!91;CL:0000048!4.48e-08!91;CL:0000239!1.32e-07!6;CL:0000677!1.32e-07!6;CL:0000212!1.32e-07!6;CL:0000584!1.32e-07!6;CL:0000066!1.54e-07!25 | |ontology_enrichment_celltype=CL:0000063!7.91e-13!66;CL:0000144!5.27e-12!121;CL:0000012!5.27e-12!121;CL:0002563!1.87e-10!9;CL:0002251!1.87e-10!9;CL:0002371!2.44e-10!118;CL:0000034!6.18e-09!97;CL:0000548!1.65e-08!115;CL:0000004!1.65e-08!115;CL:0000255!1.65e-08!115;CL:0000723!4.48e-08!91;CL:0000048!4.48e-08!91;CL:0000239!1.32e-07!6;CL:0000677!1.32e-07!6;CL:0000212!1.32e-07!6;CL:0000584!1.32e-07!6;CL:0000066!1.54e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.25e-19,9;CL:0002251,5.25e-19,9;CL:0000223,1.44e-14,20;CL:0000239,3.96e-13,6;CL:0000677,3.96e-13,6;CL:0000584,3.96e-13,6;CL:0000066,1.79e-11,25;CL:0000075,2.76e-11,7;CL:0002076,2.94e-11,15;CL:0002250,1.92e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.90e-16,3;DOID:4045,2.90e-16,3;DOID:0050686,2.20e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0003350!1.87e-10!9;UBERON:0004808!1.87e-10!9;UBERON:0001277!1.87e-10!9;UBERON:0000485!5.72e-10!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,5.25e-19,9;UBERON:0004808,5.25e-19,9;UBERON:0001277,5.25e-19,9;UBERON:0000485,1.73e-15,11;UBERON:0001242,4.75e-13,13;UBERON:0001262,4.75e-13,13;UBERON:0004786,4.75e-13,13;UBERON:0000344,2.94e-11,15;UBERON:0000490,5.70e-09,66;UBERON:0004923,7.11e-07,24 | |||
|phase1_expression=0.480446541314382,1.74487703819681,1.36499771816861,1.81478526784098,2.50447864973174,0.503637815735669,0.700837921786577,0.258246646883153,0,0.468129052643987,0,0,1.36960583944965,0.524522414513984,0,0,0,0.157731082679119,0,0,0,0,0.261199789138935,0,0.22940928106717,0.57423196411502,0.430761996159075,0.430942465371778,0,0,0,0.635030673459631,0.61506478758457,0,2.88851619751275,0.332469290716985,1.63335485009895,8.37063261473815,7.813353445238,4.71171369576418,46.4702875544501,15.0270006690858,5.34061388334269,0.125896817975577,0.202753862439029,0.367093504323363,0,0,0,0,0,0,0.503347818173209,0,0.336093799142464,0,0,0,0,0,0,0,0,0.899899717281399,0,1.4209602298922,0.299600110518405,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0.151452386666368,0.151143120213571,3.47837386442013,0,1.3599426674155,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0.301445281105245,0.117588707135705,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0.239630249011841,3.59941638596045,0.254140454146129,0,0,0.125654352112864,0.173824320192276,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0.150704817835715,0,0,0,0,0.215567992932842,0.189106080167819,0,0,0,0,0,0,0,0.772043721344145,1.13665399758237,0,0,0,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0.102904612379284,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0.54390568381871,0,0,0,0.117211686592203,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0,0,0,0,0,0.321321316421807,0,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0.509935289981566,0.839708713941948,0.276399947608848,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0.194451188344048,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0.480446541314382,1.74487703819681,1.36499771816861,1.81478526784098,2.50447864973174,0.503637815735669,0.700837921786577,0.258246646883153,0,0.468129052643987,0,0,1.36960583944965,0.524522414513984,0,0,0,0.157731082679119,0,0,0,0,0.261199789138935,0,0.22940928106717,0.57423196411502,0.430761996159075,0.430942465371778,0,0,0,0.635030673459631,0.61506478758457,0,2.88851619751275,0.332469290716985,1.63335485009895,8.37063261473815,7.813353445238,4.71171369576418,46.4702875544501,15.0270006690858,5.34061388334269,0.125896817975577,0.202753862439029,0.367093504323363,0,0,0,0,0,0,0.503347818173209,0,0.336093799142464,0,0,0,0,0,0,0,0,0.899899717281399,0,1.4209602298922,0.299600110518405,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0.151452386666368,0.151143120213571,3.47837386442013,0,1.3599426674155,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0.301445281105245,0.117588707135705,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0.239630249011841,3.59941638596045,0.254140454146129,0,0,0.125654352112864,0.173824320192276,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0.150704817835715,0,0,0,0,0.215567992932842,0.189106080167819,0,0,0,0,0,0,0,0.772043721344145,1.13665399758237,0,0,0,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0.102904612379284,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0.54390568381871,0,0,0,0.117211686592203,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0,0,0,0,0,0.321321316421807,0,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0.509935289981566,0.839708713941948,0.276399947608848,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0.194451188344048,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p@chr11:86571419..86571430,+ | |short_description=p@chr11:86571419..86571430,+ | ||
}} | }} |
Latest revision as of 06:27, 4 August 2015
Short description: | p@chr11:86571419..86571430, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:86571419..86571430, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.25e-19 | 9 |
epithelial cell of alimentary canal | 5.25e-19 | 9 |
endodermal cell | 1.44e-14 | 20 |
brush border epithelial cell | 3.96e-13 | 6 |
gut absorptive cell | 3.96e-13 | 6 |
enterocyte | 3.96e-13 | 6 |
epithelial cell | 1.79e-11 | 25 |
columnar/cuboidal epithelial cell | 2.76e-11 | 7 |
endo-epithelial cell | 2.94e-11 | 15 |
intestinal crypt stem cell | 1.92e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 5.25e-19 | 9 |
gastrointestinal system epithelium | 5.25e-19 | 9 |
intestinal epithelium | 5.25e-19 | 9 |
simple columnar epithelium | 1.73e-15 | 11 |
intestinal mucosa | 4.75e-13 | 13 |
wall of intestine | 4.75e-13 | 13 |
gastrointestinal system mucosa | 4.75e-13 | 13 |
mucosa | 2.94e-11 | 15 |
unilaminar epithelium | 5.70e-09 | 66 |
organ component layer | 7.11e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.90e-16 | 3 |
muscle cancer | 2.90e-16 | 3 |
organ system cancer | 2.20e-08 | 6 |