FFCP PHASE1:Mm9::chr8:87493661..87493678,-: Difference between revisions
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{{FFCP|EntrezGene=69724|HGNC=|UniProt=D3YWG3|association_with_transcript=0bp_to_ENSMUST00000140561_5end|description=CAGE_peak_3_at_Rnaseh2a_5end|id=chr8:87493661..87493678,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!9.63e-09!18;UBERON:0000948!9.63e-09!18;UBERON:0005498!9.63e-09!18;UBERON:0004140!9.63e-09!18;UBERON:0009881!9.63e-09!18;UBERON:0004141!9.63e-09!18;UBERON:0003084!9.63e-09!18;UBERON:0007005!9.63e-09!18;UBERON:0004139!9.63e-09!18;UBERON:0004291!9.63e-09!18;UBERON:0004535!8.82e-07!23;UBERON:0001009!8.82e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.06e-09,18;UBERON:0000948,1.06e-09,18;UBERON:0005498,1.06e-09,18;UBERON:0004140,1.06e-09,18;UBERON:0009881,1.06e-09,18;UBERON:0004141,1.06e-09,18;UBERON:0003084,1.06e-09,18;UBERON:0007005,1.06e-09,18;UBERON:0004139,1.06e-09,18;UBERON:0004291,1.06e-09,18;UBERON:0004535,1.03e-07,23;UBERON:0001009,1.03e-07,23|phase1_expression=1.60148847104794,0,0,0.90739263392049,0.500895729946347,0.671517087647559,2.10251376535973,2.45334314538995,0.281577444303333,0.468129052643987,2.22583358693156,3.03134204182278,0.684802919724823,1.13646523144697,1.33243904726265,1.41732687172878,0,2.20823515750766,0.959801035240171,1.27316895539409,0.595303031057488,6.15603897445489,8.35839325244593,0.639969691173627,0.91763712426868,0,0,0.646413698057667,0.570070258369122,2.26827116783938,1.99557459589774,5.71527606113668,7.38077745101484,0,1.1554064790051,0.831173226792462,1.42918549383658,0,0,0,0,0,0,1.38486499773135,1.4192770370732,1.10128051297009,2.34717403304412,2.18025156380447,1.09843091367236,1.94429899074283,2.2397827460058,2.87505128729943,0.838913030288682,1.45072428402269,2.35265659399725,0.257259436035947,1.14613375975503,1.54701627683233,1.21389876515759,1.05798195854407,2.53532561402472,0.677689064138264,1.77858959222228,1.7997994345628,0.988866362566974,0.7104801149461,0.599200221036809,1.15265491596466,1.65903379693564,1.4850653216486,0.630974884054146,1.99955689082663,1.10434270475807,0.61245399607477,1.53352753629178,0.919218786610021,1.10115880999389,2.17068474744819,1.68967186581868,2.63772575460388,2.10421580285542,1.56274011167028,1.67509799400829,2.8138130501584,1.83357897332172,0.883885756421003,1.42371680799103,1.3047961207771,1.06016670666458,1.36028808192214,0.289864488701678,0.860423876981386,0.679971333707751,1.07940638327563,1.29955283489534,0,1.96622188184453,0.852151612890289,0.779358013808606,2.82671659608272,1.26759077799012,0,0,7.11066703153331,1.08245520505607,1.26679932737549,0.505524445014783,1.37020655662872,3.6251303710604,1.48442139064825,0.867426633830679,0,0.691846491768175,1.05505848386836,0.823120949949934,1.25666591329675,0,0.578397427679647,0.884610551949874,1.45590164952668,0.441683036920787,1.45462575940567,0,0.292780797011547,1.25668024088073,1.02182822083437,3.35482348616577,4.19931911695385,2.79554499560742,0.748953197024114,0.915001205637253,0.502617408451458,0.695297280769106,0.511430914660661,1.87009240103604,0.973447578406546,0.712875546952214,1.36847667671102,2.52722758433675,0,1.04096354370163,1.14951052216736,2.16074555766419,0.753524089178575,1.15662048557257,0.896796041993948,0.937017245597288,0.776110112217047,1.29340795759705,1.32374256117473,1.75951124163949,1.53437012699302,0.556094498451196,0.696504333044333,1.02891068203972,0.59710280045548,2.80885274925294,2.31613116403244,1.70498099637356,1.86413195281952,3.28336483973535,3.42117916775928,4.02466050494857,3.54175617145327,4.01094493507183,6.51095045301142,6.9751084363901,4.2035523252181,5.10135534731789,5.58169377868924,5.99909190639332,7.89479932096795,6.36695334344047,6.44190810049784,1.47202963994889,0.308713837137853,1.32167513193519,1.58670339998127,1.91959425481711,0.464473343720877,0.902072229254653,1.61346819698674,1.11189021922435,0.570676878337677,0,0.823494773620054,1.75934646160189,0.596869416123452,1.16978452271472,0.898819408654221,0.216138049874694,1.1948476395262,1.13800740571849,0.913988100877831,1.1270773567308,1.22190796707189,1.16371492300575,0.771494018793504,1.26473074248515,0.885660887877613,1.09899109488962,0.740382983530803,0,0.667380422864376,1.57247196090562,1.12431056192427,2.23146133527353,0.482354319504834,1.78238096246994,0.575392274901621,1.13494658742525,0,0,0.744281895337007,0.624075346229121,0.757736633841335,0.358794827043824,0,1.29327233116623,1.13694847062291,0.814824882210129,0.848725428875941,1.17345124144251,0.670025029767263,0.952174563544055,0.390267295715598,0.788175720530955,1.10732344824387,0.478364305972461,0.655453258862952,1.38147985492716,0.433947175744535,0,0.54390568381871,1.47529281905711,0.275936746304732,1.9266070798535,0.703270119553219,2.13115428989678,0.757412781613119,0.94652465824877,1.17131623288992,1.93881057959519,1.43381278771531,0.891194696329576,1.41538265394416,0,0,1.58115111178609,0.642642632843614,2.2710413633323,1.24645922567079,0.651547837414304,1.97964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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:69724 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3YWG3 | |||
|association_with_transcript=0bp_to_ENSMUST00000140561_5end | |||
|cluster_id=chr8:87493661..87493678,- | |||
|description=CAGE_peak_3_at_Rnaseh2a_5end | |||
|id=chr8:87493661..87493678,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!9.63e-09!18;UBERON:0000948!9.63e-09!18;UBERON:0005498!9.63e-09!18;UBERON:0004140!9.63e-09!18;UBERON:0009881!9.63e-09!18;UBERON:0004141!9.63e-09!18;UBERON:0003084!9.63e-09!18;UBERON:0007005!9.63e-09!18;UBERON:0004139!9.63e-09!18;UBERON:0004291!9.63e-09!18;UBERON:0004535!8.82e-07!23;UBERON:0001009!8.82e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.06e-09,18;UBERON:0000948,1.06e-09,18;UBERON:0005498,1.06e-09,18;UBERON:0004140,1.06e-09,18;UBERON:0009881,1.06e-09,18;UBERON:0004141,1.06e-09,18;UBERON:0003084,1.06e-09,18;UBERON:0007005,1.06e-09,18;UBERON:0004139,1.06e-09,18;UBERON:0004291,1.06e-09,18;UBERON:0004535,1.03e-07,23;UBERON:0001009,1.03e-07,23 | |||
|phase1_expression=1.60148847104794,0,0,0.90739263392049,0.500895729946347,0.671517087647559,2.10251376535973,2.45334314538995,0.281577444303333,0.468129052643987,2.22583358693156,3.03134204182278,0.684802919724823,1.13646523144697,1.33243904726265,1.41732687172878,0,2.20823515750766,0.959801035240171,1.27316895539409,0.595303031057488,6.15603897445489,8.35839325244593,0.639969691173627,0.91763712426868,0,0,0.646413698057667,0.570070258369122,2.26827116783938,1.99557459589774,5.71527606113668,7.38077745101484,0,1.1554064790051,0.831173226792462,1.42918549383658,0,0,0,0,0,0,1.38486499773135,1.4192770370732,1.10128051297009,2.34717403304412,2.18025156380447,1.09843091367236,1.94429899074283,2.2397827460058,2.87505128729943,0.838913030288682,1.45072428402269,2.35265659399725,0.257259436035947,1.14613375975503,1.54701627683233,1.21389876515759,1.05798195854407,2.53532561402472,0.677689064138264,1.77858959222228,1.7997994345628,0.988866362566974,0.7104801149461,0.599200221036809,1.15265491596466,1.65903379693564,1.4850653216486,0.630974884054146,1.99955689082663,1.10434270475807,0.61245399607477,1.53352753629178,0.919218786610021,1.10115880999389,2.17068474744819,1.68967186581868,2.63772575460388,2.10421580285542,1.56274011167028,1.67509799400829,2.8138130501584,1.83357897332172,0.883885756421003,1.42371680799103,1.3047961207771,1.06016670666458,1.36028808192214,0.289864488701678,0.860423876981386,0.679971333707751,1.07940638327563,1.29955283489534,0,1.96622188184453,0.852151612890289,0.779358013808606,2.82671659608272,1.26759077799012,0,0,7.11066703153331,1.08245520505607,1.26679932737549,0.505524445014783,1.37020655662872,3.6251303710604,1.48442139064825,0.867426633830679,0,0.691846491768175,1.05505848386836,0.823120949949934,1.25666591329675,0,0.578397427679647,0.884610551949874,1.45590164952668,0.441683036920787,1.45462575940567,0,0.292780797011547,1.25668024088073,1.02182822083437,3.35482348616577,4.19931911695385,2.79554499560742,0.748953197024114,0.915001205637253,0.502617408451458,0.695297280769106,0.511430914660661,1.87009240103604,0.973447578406546,0.712875546952214,1.36847667671102,2.52722758433675,0,1.04096354370163,1.14951052216736,2.16074555766419,0.753524089178575,1.15662048557257,0.896796041993948,0.937017245597288,0.776110112217047,1.29340795759705,1.32374256117473,1.75951124163949,1.53437012699302,0.556094498451196,0.696504333044333,1.02891068203972,0.59710280045548,2.80885274925294,2.31613116403244,1.70498099637356,1.86413195281952,3.28336483973535,3.42117916775928,4.02466050494857,3.54175617145327,4.01094493507183,6.51095045301142,6.9751084363901,4.2035523252181,5.10135534731789,5.58169377868924,5.99909190639332,7.89479932096795,6.36695334344047,6.44190810049784,1.47202963994889,0.308713837137853,1.32167513193519,1.58670339998127,1.91959425481711,0.464473343720877,0.902072229254653,1.61346819698674,1.11189021922435,0.570676878337677,0,0.823494773620054,1.75934646160189,0.596869416123452,1.16978452271472,0.898819408654221,0.216138049874694,1.1948476395262,1.13800740571849,0.913988100877831,1.1270773567308,1.22190796707189,1.16371492300575,0.771494018793504,1.26473074248515,0.885660887877613,1.09899109488962,0.740382983530803,0,0.667380422864376,1.57247196090562,1.12431056192427,2.23146133527353,0.482354319504834,1.78238096246994,0.575392274901621,1.13494658742525,0,0,0.744281895337007,0.624075346229121,0.757736633841335,0.358794827043824,0,1.29327233116623,1.13694847062291,0.814824882210129,0.848725428875941,1.17345124144251,0.670025029767263,0.952174563544055,0.390267295715598,0.788175720530955,1.10732344824387,0.478364305972461,0.655453258862952,1.38147985492716,0.433947175744535,0,0.54390568381871,1.47529281905711,0.275936746304732,1.9266070798535,0.703270119553219,2.13115428989678,0.757412781613119,0.94652465824877,1.17131623288992,1.93881057959519,1.43381278771531,0.891194696329576,1.41538265394416,0,0,1.58115111178609,0.642642632843614,2.2710413633323,1.24645922567079,0.651547837414304,1.97964147567043,0,1.69946445308487,0.906970670894253,0.754420319023592,1.18120757152309,1.53717573971964,1.29214146584111,1.45413491791002,1.42598951353889,0.948110273807448,0,1.03135543248187,2.7235168460303,1.08036656418786,1.4229455216103,1.28602221018955,1.24138163549592,2.14042581122485,0.493647061806363,0.913394847343798,0.23467170806371,2.33015277950202,1.32317038832977,0.65954501176592,1.13025098687134,0.542816324353403,1.19372344003136,0.656563598980245,0,0.927126510052548,1.36696704638282,0.82554747185289,0.555583582109135,0.565105371014073,1.6403307326523,1.14389086603261,3.56954702987096,4.89830083132803,3.59319931891502,1.90934123603023,1.26534397432454,1.01659733563424,0.540026704109006,0.418176592028937,1.09181281873089,1.21377911746339,0.826534557253359,1.30877970992015,0.259229946583586,0,0,0.897099276263873,1.15820943319968,0.583353565032143,1.29159823477731,1.35164900392623,1.05621514781179,0.2604087696879,1.25831213310853,0.241584120826006,0.864090018773596,0.948033361884535,1.62180172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| |||
|short_description=p3@Rnaseh2a | |||
}} |
Revision as of 06:34, 4 August 2015
Short description: | p3@Rnaseh2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rnaseh2a_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000140561_5end |
EntrezGene: | 69724 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.06e-09 | 18 |
heart | 1.06e-09 | 18 |
primitive heart tube | 1.06e-09 | 18 |
primary heart field | 1.06e-09 | 18 |
anterior lateral plate mesoderm | 1.06e-09 | 18 |
heart tube | 1.06e-09 | 18 |
heart primordium | 1.06e-09 | 18 |
cardiac mesoderm | 1.06e-09 | 18 |
cardiogenic plate | 1.06e-09 | 18 |
heart rudiment | 1.06e-09 | 18 |
cardiovascular system | 1.03e-07 | 23 |
circulatory system | 1.03e-07 | 23 |