FFCP PHASE1:Mm9::chr14:34063563..34063597,+: Difference between revisions
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{{FFCP|EntrezGene=239027|HGNC=|MCL_coexpression_id=2902|UniProt=|association_with_transcript=0bp_to_ENSMUST00000131086_5end|description=CAGE_peak_1_at_Arhgap22_5end|id=chr14:34063563..34063597,+|ontology_enrichment_celltype=CL:0000333!8.49e-07!10;CL:0000095!8.49e-07!10;CL:0000243!8.49e-07!10;CL:0000123!8.49e-07!10;CL:0000125!8.49e-07!10;CL:0000030!8.49e-07!10;CL:0000339!8.49e-07!10|ontology_enrichment_celltype_v019_2=CL:0000333,7.77e-14,10;CL:0000095,7.77e-14,10;CL:0000243,7.77e-14,10;CL:0000123,7.77e-14,10;CL:0000125,7.77e-14,10;CL:0000030,7.77e-14,10;CL:0000339,7.77e-14,10;CL:0000128,1.18e-10,6;CL:0000126,1.18e-10,6;CL:0000127,1.18e-10,6;CL:0002453,2.60e-10,8;CL:0000349,3.26e-07,3;CL:0000351,3.26e-07,3;CL:0002319,4.02e-07,43;CL:0000221,7.12e-07,44;CL:0000133,7.12e-07,44;CL:0002321,7.25e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000010,5.55e-08,11;UBERON:0002369,5.56e-08,7;UBERON:0006858,5.56e-08,7;UBERON:0000358,3.26e-07,3;UBERON:0000307,3.26e-07,3;UBERON:0007010,3.26e-07,3;UBERON:0005631,7.52e-07,3;UBERON:0000478,7.52e-07,3;UBERON:0000158,7.52e-07,3|phase1_expression=0,0.348975407639361,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0.297872853602656,0,0,0.22940928106717,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6366586336825,2.02753862439029,0.734187008646726,3.12956537739216,4.57852828398938,2.19686182734472,1.36100929351998,2.51975558925653,4.31257693094915,0,0,0,1.54355661621568,2.57880095944881,0.515672092277442,0,0,0,7.79342423759004,3.55717918444456,1.7997994345628,0.988866362566974,3.5524005747305,1.49800055259202,0.384218305321555,0,0,0,0.285650984403804,0.662605622854841,0,0.0958454710182364,0,1.10115880999389,1.27687338085188,0.768032666281217,0.263772575460388,0,0.52091337055676,0.558365998002762,0,0.30559649555362,0,0.427115042397309,0.745597783301202,12.343369513309,6.49915416918356,0,0,0,0,0,0,0.140444420131752,4.60161870960756,5.71529210126311,4.59341446863442,0.14084341977668,0,0,0,1.08245520505607,1.01343946190039,0.505524445014783,0,0,2.52351636410202,1.38788261412909,1.21786191324856,1.61430848079241,1.3565037649736,1.52865319276416,0.376999773989026,3.21353458054686,0.433798070759735,0.884610551949874,1.29413479957927,0.220841518460394,0.484875253135222,1.86391761218122,0,0,0.255457055208591,0,0,0,0.449371918214468,0,0,0.173824320192276,0,1.0389402227978,0.811206315338788,1.01839363850316,0.373220911830279,0,0,0.130120442962704,0,0,0.452114453507145,0.272145996605311,0.384341160854549,0.0937017245597288,0,0,0,0,0,0.278047249225598,0.348252166522167,0,0.995171334092466,0,0,0,0.621377317606506,0.703578179943289,0.180062061461015,0.710234206755631,0.196764231747404,0.308534225774757,0.465067889500816,0,0.233530684734339,0.16455984991348,0.164167464079095,0.324275238183423,0.438599962275997,0.878200461164203,0.805238512562231,0.210289948564127,0,0,0.528901133327089,1.49301775374664,0.928946687441754,0.902072229254653,0.605050573870028,0,0.570676878337677,0.474529061544512,0.329397909448022,1.00534083520108,0.994782360205754,0.58489226135736,0,0.216138049874694,0.597423819763102,0,0.685491075658373,0,0,0,0.0701358198903186,0,0,0,0,0,0.667380422864376,0.786235980452812,0,0.608580364165509,0,0.25462585178142,0,0.486405680325106,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0.568474235311454,0.162964976442026,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0.780534591431195,0.315270288212382,0.221464689648775,0.318909537314974,0.163863314715738,0,0.289298117163023,0,0,0,0.275936746304732,0,0.117211686592203,1.80328439914343,0.504941854408746,0,0,0.861693590931196,5.73525115086125,5.12436950389506,4.52922449262132,0.809621403349789,2.33804686329049,2.37172666767914,0.642642632843614,0.851640511249612,0.712262414669021,0.651547837414304,0.989820737835213,0,0.485561272309963,0,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,1.26414703174326,0,0,0,0.18006109403131,0.258717367565509,0.428674070063185,0,0,0.164549020602121,0.913394847343798,10.7948985709307,11.6507638975101,0.220528398054962,0,0.161464426695906,0.241251699712623,0.238744688006273,0.328281799490123,0.582961673259701,0,0,1.03193433981611,0,0,0,0,0,0,0,0.954670618015114,0.790839983952838,0.203319467126849,0.86404272657441,0.418176592028937,1.31017538247707,0.944050424693745,0.578574190077352,1.30877970992015,0.518459893167171,0,0,0.299033092087958,0.165458490457098,0.388902376688095,0.645799117388655,0.675824501963113,0.352071715937262,0.13020438484395,0.314578033277133,0,0,0,0.202725215290164,0,0,0.358053391334963,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0.680191150845634,10.433339808581,19.6473345974752,12.5913462273059,0.386379188064381,0.375364950902364,0,0.857473516316263,0,0,0.460325236507177,0,0.343706364687375,0,0.755393897389701,0,0.45032120322422,0,0.51776031175182,0.726511433089237,0.798049746802062,0.341467211508268,0.243106717068294,0.628839487883947,0.367687016900028,0.44449345560323,0.618105171716683,0,0,0.50695859978048,0.188626341386076,0.187283014939765,0.384150914429216,0.516919220600519,0,0.231768651889711,0,0.412085900803307,0.588795680537589,0.685738504770831,0.354951612318675,0.238436189947321,0.145346416632329,0.282328141245992,0.592302255241736,0.914639864363863,0,0.679020569229309,0.561142271657738,0.237270036248348,0,0,0,0.385813221962283,0.499621155875892,0.467863216890817,0.214871054048298,1.3390183244819,0.661774257358546,0.463735671240843|short_description=p1@Arhgap22}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:239027 | |||
|HGNC= | |||
|MCL_coexpression_id=2902 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000131086_5end | |||
|cluster_id=chr14:34063563..34063597,+ | |||
|description=CAGE_peak_1_at_Arhgap22_5end | |||
|id=chr14:34063563..34063597,+ | |||
|ontology_enrichment_celltype=CL:0000333!8.49e-07!10;CL:0000095!8.49e-07!10;CL:0000243!8.49e-07!10;CL:0000123!8.49e-07!10;CL:0000125!8.49e-07!10;CL:0000030!8.49e-07!10;CL:0000339!8.49e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,7.77e-14,10;CL:0000095,7.77e-14,10;CL:0000243,7.77e-14,10;CL:0000123,7.77e-14,10;CL:0000125,7.77e-14,10;CL:0000030,7.77e-14,10;CL:0000339,7.77e-14,10;CL:0000128,1.18e-10,6;CL:0000126,1.18e-10,6;CL:0000127,1.18e-10,6;CL:0002453,2.60e-10,8;CL:0000349,3.26e-07,3;CL:0000351,3.26e-07,3;CL:0002319,4.02e-07,43;CL:0000221,7.12e-07,44;CL:0000133,7.12e-07,44;CL:0002321,7.25e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,5.55e-08,11;UBERON:0002369,5.56e-08,7;UBERON:0006858,5.56e-08,7;UBERON:0000358,3.26e-07,3;UBERON:0000307,3.26e-07,3;UBERON:0007010,3.26e-07,3;UBERON:0005631,7.52e-07,3;UBERON:0000478,7.52e-07,3;UBERON:0000158,7.52e-07,3 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0.297872853602656,0,0,0.22940928106717,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6366586336825,2.02753862439029,0.734187008646726,3.12956537739216,4.57852828398938,2.19686182734472,1.36100929351998,2.51975558925653,4.31257693094915,0,0,0,1.54355661621568,2.57880095944881,0.515672092277442,0,0,0,7.79342423759004,3.55717918444456,1.7997994345628,0.988866362566974,3.5524005747305,1.49800055259202,0.384218305321555,0,0,0,0.285650984403804,0.662605622854841,0,0.0958454710182364,0,1.10115880999389,1.27687338085188,0.768032666281217,0.263772575460388,0,0.52091337055676,0.558365998002762,0,0.30559649555362,0,0.427115042397309,0.745597783301202,12.343369513309,6.49915416918356,0,0,0,0,0,0,0.140444420131752,4.60161870960756,5.71529210126311,4.59341446863442,0.14084341977668,0,0,0,1.08245520505607,1.01343946190039,0.505524445014783,0,0,2.52351636410202,1.38788261412909,1.21786191324856,1.61430848079241,1.3565037649736,1.52865319276416,0.376999773989026,3.21353458054686,0.433798070759735,0.884610551949874,1.29413479957927,0.220841518460394,0.484875253135222,1.86391761218122,0,0,0.255457055208591,0,0,0,0.449371918214468,0,0,0.173824320192276,0,1.0389402227978,0.811206315338788,1.01839363850316,0.373220911830279,0,0,0.130120442962704,0,0,0.452114453507145,0.272145996605311,0.384341160854549,0.0937017245597288,0,0,0,0,0,0.278047249225598,0.348252166522167,0,0.995171334092466,0,0,0,0.621377317606506,0.703578179943289,0.180062061461015,0.710234206755631,0.196764231747404,0.308534225774757,0.465067889500816,0,0.233530684734339,0.16455984991348,0.164167464079095,0.324275238183423,0.438599962275997,0.878200461164203,0.805238512562231,0.210289948564127,0,0,0.528901133327089,1.49301775374664,0.928946687441754,0.902072229254653,0.605050573870028,0,0.570676878337677,0.474529061544512,0.329397909448022,1.00534083520108,0.994782360205754,0.58489226135736,0,0.216138049874694,0.597423819763102,0,0.685491075658373,0,0,0,0.0701358198903186,0,0,0,0,0,0.667380422864376,0.786235980452812,0,0.608580364165509,0,0.25462585178142,0,0.486405680325106,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0.568474235311454,0.162964976442026,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0.780534591431195,0.315270288212382,0.221464689648775,0.318909537314974,0.163863314715738,0,0.289298117163023,0,0,0,0.275936746304732,0,0.117211686592203,1.80328439914343,0.504941854408746,0,0,0.861693590931196,5.73525115086125,5.12436950389506,4.52922449262132,0.809621403349789,2.33804686329049,2.37172666767914,0.642642632843614,0.851640511249612,0.712262414669021,0.651547837414304,0.989820737835213,0,0.485561272309963,0,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,1.26414703174326,0,0,0,0.18006109403131,0.258717367565509,0.428674070063185,0,0,0.164549020602121,0.913394847343798,10.7948985709307,11.6507638975101,0.220528398054962,0,0.161464426695906,0.241251699712623,0.238744688006273,0.328281799490123,0.582961673259701,0,0,1.03193433981611,0,0,0,0,0,0,0,0.954670618015114,0.790839983952838,0.203319467126849,0.86404272657441,0.418176592028937,1.31017538247707,0.944050424693745,0.578574190077352,1.30877970992015,0.518459893167171,0,0,0.299033092087958,0.165458490457098,0.388902376688095,0.645799117388655,0.675824501963113,0.352071715937262,0.13020438484395,0.314578033277133,0,0,0,0.202725215290164,0,0,0.358053391334963,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0.680191150845634,10.433339808581,19.6473345974752,12.5913462273059,0.386379188064381,0.375364950902364,0,0.857473516316263,0,0,0.460325236507177,0,0.343706364687375,0,0.755393897389701,0,0.45032120322422,0,0.51776031175182,0.726511433089237,0.798049746802062,0.341467211508268,0.243106717068294,0.628839487883947,0.367687016900028,0.44449345560323,0.618105171716683,0,0,0.50695859978048,0.188626341386076,0.187283014939765,0.384150914429216,0.516919220600519,0,0.231768651889711,0,0.412085900803307,0.588795680537589,0.685738504770831,0.354951612318675,0.238436189947321,0.145346416632329,0.282328141245992,0.592302255241736,0.914639864363863,0,0.679020569229309,0.561142271657738,0.237270036248348,0,0,0,0.385813221962283,0.499621155875892,0.467863216890817,0.214871054048298,1.3390183244819,0.661774257358546,0.463735671240843 | |||
|short_description=p1@Arhgap22 | |||
}} |
Revision as of 06:37, 4 August 2015
Short description: | p1@Arhgap22 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Arhgap22_5end |
Coexpression cluster: | MCL_coexpression_mm9:2902 |
Association with transcript: | 0bp_to_ENSMUST00000131086_5end |
EntrezGene: | 239027 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 7.77e-14 | 10 |
neuron associated cell | 7.77e-14 | 10 |
glial cell (sensu Vertebrata) | 7.77e-14 | 10 |
neuron associated cell (sensu Vertebrata) | 7.77e-14 | 10 |
glial cell | 7.77e-14 | 10 |
glioblast | 7.77e-14 | 10 |
glioblast (sensu Vertebrata) | 7.77e-14 | 10 |
oligodendrocyte | 1.18e-10 | 6 |
macroglial cell | 1.18e-10 | 6 |
astrocyte | 1.18e-10 | 6 |
oligodendrocyte precursor cell | 2.60e-10 | 8 |
extraembryonic cell | 3.26e-07 | 3 |
trophoblast cell | 3.26e-07 | 3 |
neural cell | 4.02e-07 | 43 |
ectodermal cell | 7.12e-07 | 44 |
neurectodermal cell | 7.12e-07 | 44 |
embryonic cell | 7.25e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 5.55e-08 | 11 |
adrenal gland | 5.56e-08 | 7 |
adrenal/interrenal gland | 5.56e-08 | 7 |
blastocyst | 3.26e-07 | 3 |
blastula | 3.26e-07 | 3 |
cleaving embryo | 3.26e-07 | 3 |
extraembryonic membrane | 7.52e-07 | 3 |
extraembryonic structure | 7.52e-07 | 3 |
membranous layer | 7.52e-07 | 3 |