FFCP PHASE1:Mm9::chr5:31252508..31252520,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:31252508..31252520,+
|short_description=p1@ENSMUST00000006814
|description=CAGE_peak_1_at_ENSMUST00000006814_5end
|association_with_transcript=29bp_to_ENSM...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=191 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_ENSMUST00000006814_5end | |||
|cluster_id=chr5:31252508..31252520,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000006814_5end | |||
|id=chr5:31252508..31252520,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.01e-08!9;CL:0002251!2.01e-08!9;CL:0000239!3.73e-07!6;CL:0000677!3.73e-07!6;CL:0000212!3.73e-07!6;CL:0000584!3.73e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.58e-19,6;CL:0000677,1.58e-19,6;CL:0000584,1.58e-19,6;CL:0000075,1.19e-16,7;CL:0002563,8.29e-13,9;CL:0002251,8.29e-13,9;CL:0000682,9.64e-11,3;CL:0000066,2.60e-09,25;CL:0000217,1.81e-07,2;CL:0000328,1.81e-07,2;CL:0002573,1.81e-07,2;CL:0002376,1.81e-07,2;CL:0000218,1.81e-07,2;CL:0000692,1.81e-07,2;CL:0002377,1.81e-07,2;CL:0002375,1.81e-07,2;CL:0002076,2.04e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.20e-14!15;UBERON:0001242!6.58e-12!13;UBERON:0000060!6.58e-12!13;UBERON:0001262!6.58e-12!13;UBERON:0004786!6.58e-12!13;UBERON:0000160!2.80e-11!43;UBERON:0004923!1.95e-10!24;UBERON:0003350!2.01e-08!9;UBERON:0004808!2.01e-08!9;UBERON:0001277!2.01e-08!9;UBERON:0005409!3.46e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.71e-36,31;UBERON:0000344,4.06e-29,15;UBERON:0001242,3.60e-23,13;UBERON:0001262,3.60e-23,13;UBERON:0004786,3.60e-23,13;UBERON:0005409,2.63e-22,47;UBERON:0004923,2.72e-17,24;UBERON:0003350,8.29e-13,9;UBERON:0004808,8.29e-13,9;UBERON:0001277,8.29e-13,9;UBERON:0002108,2.69e-12,4;UBERON:0000485,2.33e-10,11;UBERON:0000331,8.94e-10,3;UBERON:0002116,8.94e-10,3;UBERON:0001204,8.94e-10,3;UBERON:0001168,8.94e-10,3;UBERON:0001007,1.15e-08,116;UBERON:0001555,1.15e-08,116;UBERON:0007026,1.15e-08,116;UBERON:0004119,1.92e-08,118;UBERON:0000925,1.92e-08,118;UBERON:0006595,1.92e-08,118;UBERON:0001962,8.02e-08,2;UBERON:0001961,8.02e-08,2;UBERON:0001744,8.02e-08,2;UBERON:0004921,8.28e-07,114 | |||
|phase1_expression=0,15.0059425284925,16.8349718574128,6.0492842261366,5.00895729946347,2.68606835059024,3.27057696833736,0.258246646883153,0.140788722151667,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,0.510259740906419,0.0992909512008853,0,10.239515058778,11.9292826154928,16.0784949952206,4.30761996159075,8.83432054012145,3.99049180858385,1.51218077855958,1.99557459589774,0,0,0,0.577703239502549,0.166234645358492,0.408338712524738,0,0.7813353445238,0,0.588231488031014,0,0,0,0.101376931219515,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0.0958454710182364,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0.186399445825301,9.08714319998209,2.87171928405785,0.289864488701678,0,0,0.539703191637817,0,0,1.12355536105401,0.340860645156116,0.519572009205738,0,0,0,0,0,0.216491041011214,0,0.505524445014783,1.94112595522402,0,0,0,0,0,0,0,0.125666591329675,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,0,0.83778682725382,1.02182822083437,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0.841767423545896,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0.438599962275997,0,0.134206418760372,0,0.102904612379284,4.29544417878937,16.6603856998033,0,0,0,0.403367049246685,0.22237804384487,1.14135375667535,1.42358718463353,1.64698954724011,1.75934646160189,1.39269530428806,1.75467678407208,0.898819408654221,1.51296634912286,0.796565093017469,0,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0.590440591918409,0.31399745568275,0.616985819609003,0.889357881261447,0.333690211432188,0,0.224862112384854,0,0,0,0,0,0.274561413188081,0,0,0.624075346229121,0.252578877947112,0.896987067609561,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0.23467170806371,0,0,0,0.161464426695906,0,0,0.492422699235184,1.45740418314925,0,0.170870880797853,0,0,0.188368457004691,0,0,0,0,0.138199973804424,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0.56369293868419,0,0.165458490457098,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0,0,0.183151624267265,0.428736758158132,0,0.564751842617067,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0.187283014939765,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0.271608227691724,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0.231867835620421 | |phase1_expression=0,15.0059425284925,16.8349718574128,6.0492842261366,5.00895729946347,2.68606835059024,3.27057696833736,0.258246646883153,0.140788722151667,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,0.510259740906419,0.0992909512008853,0,10.239515058778,11.9292826154928,16.0784949952206,4.30761996159075,8.83432054012145,3.99049180858385,1.51218077855958,1.99557459589774,0,0,0,0.577703239502549,0.166234645358492,0.408338712524738,0,0.7813353445238,0,0.588231488031014,0,0,0,0.101376931219515,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0.0958454710182364,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0.186399445825301,9.08714319998209,2.87171928405785,0.289864488701678,0,0,0.539703191637817,0,0,1.12355536105401,0.340860645156116,0.519572009205738,0,0,0,0,0,0.216491041011214,0,0.505524445014783,1.94112595522402,0,0,0,0,0,0,0,0.125666591329675,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,0,0.83778682725382,1.02182822083437,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0.841767423545896,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0.438599962275997,0,0.134206418760372,0,0.102904612379284,4.29544417878937,16.6603856998033,0,0,0,0.403367049246685,0.22237804384487,1.14135375667535,1.42358718463353,1.64698954724011,1.75934646160189,1.39269530428806,1.75467678407208,0.898819408654221,1.51296634912286,0.796565093017469,0,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0.590440591918409,0.31399745568275,0.616985819609003,0.889357881261447,0.333690211432188,0,0.224862112384854,0,0,0,0,0,0.274561413188081,0,0,0.624075346229121,0.252578877947112,0.896987067609561,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0.23467170806371,0,0,0,0.161464426695906,0,0,0.492422699235184,1.45740418314925,0,0.170870880797853,0,0,0.188368457004691,0,0,0,0,0.138199973804424,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0.56369293868419,0,0.165458490457098,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0,0,0.183151624267265,0.428736758158132,0,0.564751842617067,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0.187283014939765,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0.271608227691724,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0.231867835620421 | ||
|short_description=p1@ENSMUST00000006814 | |||
}} | }} |
Latest revision as of 06:50, 4 August 2015
Short description: | p1@ENSMUST00000006814 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000006814_5end |
Coexpression cluster: | MCL_coexpression_mm9:191 |
Association with transcript: | 29bp_to_ENSMUST00000006814_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.58e-19 | 6 |
gut absorptive cell | 1.58e-19 | 6 |
enterocyte | 1.58e-19 | 6 |
columnar/cuboidal epithelial cell | 1.19e-16 | 7 |
intestinal epithelial cell | 8.29e-13 | 9 |
epithelial cell of alimentary canal | 8.29e-13 | 9 |
M cell of gut | 9.64e-11 | 3 |
epithelial cell | 2.60e-09 | 25 |
insulating cell | 1.81e-07 | 2 |
myelin accumulating cell | 1.81e-07 | 2 |
Schwann cell | 1.81e-07 | 2 |
non-myelinating Schwann cell | 1.81e-07 | 2 |
myelinating Schwann cell;;Schwann cell | 1.81e-07 | 2 |
terminal Schwann cell | 1.81e-07 | 2 |
immature Schwann cell | 1.81e-07 | 2 |
Schwann cell precursor | 1.81e-07 | 2 |
endo-epithelial cell | 2.04e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.71e-36 | 31 |
mucosa | 4.06e-29 | 15 |
intestinal mucosa | 3.60e-23 | 13 |
wall of intestine | 3.60e-23 | 13 |
gastrointestinal system mucosa | 3.60e-23 | 13 |
gastrointestinal system | 2.63e-22 | 47 |
organ component layer | 2.72e-17 | 24 |
epithelium of mucosa | 8.29e-13 | 9 |
gastrointestinal system epithelium | 8.29e-13 | 9 |
intestinal epithelium | 8.29e-13 | 9 |
small intestine | 2.69e-12 | 4 |
simple columnar epithelium | 2.33e-10 | 11 |
ileal mucosa | 8.94e-10 | 3 |
ileum | 8.94e-10 | 3 |
mucosa of small intestine | 8.94e-10 | 3 |
wall of small intestine | 8.94e-10 | 3 |
digestive system | 1.15e-08 | 116 |
digestive tract | 1.15e-08 | 116 |
primitive gut | 1.15e-08 | 116 |
endoderm-derived structure | 1.92e-08 | 118 |
endoderm | 1.92e-08 | 118 |
presumptive endoderm | 1.92e-08 | 118 |
gut-associated lymphoid tissue | 8.02e-08 | 2 |
mucosa-associated lymphoid tissue | 8.02e-08 | 2 |
lymphoid tissue | 8.02e-08 | 2 |
subdivision of digestive tract | 8.28e-07 | 114 |