FFCP PHASE1:Mm9::chr5:34325739..34325749,+: Difference between revisions
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{{FFCP|EntrezGene=381633|HGNC=|MCL_coexpression_id=143|UniProt=Q3UR78|association_with_transcript=-336bp_to_ENSMUST00000114384,uc008xbp.1_5end|description=CAGE_peak_6_at_Gm1673_5end|id=chr5:34325739..34325749,+|ontology_enrichment_celltype=CL:0000349!2.94e-10!3;CL:0000351!2.94e-10!3;CL:0000117!5.72e-07!23;CL:0000337!5.72e-07!23|ontology_enrichment_celltype_v019_2=CL:0000349,4.56e-11,3;CL:0000351,4.56e-11,3;CL:0000120,7.15e-11,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000358!2.94e-10!3;UBERON:0000307!2.94e-10!3;UBERON:0001049!1.22e-07!52;UBERON:0005068!1.22e-07!52;UBERON:0006241!1.22e-07!52;UBERON:0007135!1.22e-07!52;UBERON:0001017!1.80e-07!73;UBERON:0005743!1.80e-07!73;UBERON:0000073!3.53e-07!75;UBERON:0001016!3.53e-07!75;UBERON:0002616!7.65e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0000998,5.62e-30,1;UBERON:0007194,5.62e-30,1;UBERON:0006868,5.62e-30,1;UBERON:0010147,9.49e-16,2;UBERON:0003937,9.49e-16,2;UBERON:0005399,9.49e-16,2;UBERON:0000358,4.56e-11,3;UBERON:0000307,4.56e-11,3;UBERON:0007010,4.56e-11,3;UBERON:0000080,1.46e-08,4;UBERON:0005904,1.46e-08,4;UBERON:0006947,1.46e-08,4;UBERON:0002120,1.46e-08,4;UBERON:0004054,1.46e-08,4;UBERON:0004875,1.46e-08,4;UBERON:0004876,1.46e-08,4;UBERON:0005721,1.46e-08,4;UBERON:0005754,1.46e-08,4;UBERON:0007297,1.46e-08,4|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0.257259436035947,0,0,0,1.05798195854407,0,0,0,0,0,0,0,0,0,0,0,0,0.441737081903227,0,0.0958454710182364,0,0,0.127687338085188,0,0.395658863190582,0,0,0.279182999001381,0.56276261003168,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0.162241263067758,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,3.40912655116008,0.503653849092235,0,0,0,0,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p6@Gm1673}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:381633 | |||
|HGNC= | |||
|MCL_coexpression_id=143 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3UR78 | |||
|association_with_transcript=-336bp_to_ENSMUST00000114384,uc008xbp.1_5end | |||
|cluster_id=chr5:34325739..34325749,+ | |||
|description=CAGE_peak_6_at_Gm1673_5end | |||
|id=chr5:34325739..34325749,+ | |||
|ontology_enrichment_celltype=CL:0000349!2.94e-10!3;CL:0000351!2.94e-10!3;CL:0000117!5.72e-07!23;CL:0000337!5.72e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.56e-11,3;CL:0000351,4.56e-11,3;CL:0000120,7.15e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000358!2.94e-10!3;UBERON:0000307!2.94e-10!3;UBERON:0001049!1.22e-07!52;UBERON:0005068!1.22e-07!52;UBERON:0006241!1.22e-07!52;UBERON:0007135!1.22e-07!52;UBERON:0001017!1.80e-07!73;UBERON:0005743!1.80e-07!73;UBERON:0000073!3.53e-07!75;UBERON:0001016!3.53e-07!75;UBERON:0002616!7.65e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,5.62e-30,1;UBERON:0007194,5.62e-30,1;UBERON:0006868,5.62e-30,1;UBERON:0010147,9.49e-16,2;UBERON:0003937,9.49e-16,2;UBERON:0005399,9.49e-16,2;UBERON:0000358,4.56e-11,3;UBERON:0000307,4.56e-11,3;UBERON:0007010,4.56e-11,3;UBERON:0000080,1.46e-08,4;UBERON:0005904,1.46e-08,4;UBERON:0006947,1.46e-08,4;UBERON:0002120,1.46e-08,4;UBERON:0004054,1.46e-08,4;UBERON:0004875,1.46e-08,4;UBERON:0004876,1.46e-08,4;UBERON:0005721,1.46e-08,4;UBERON:0005754,1.46e-08,4;UBERON:0007297,1.46e-08,4 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0.257259436035947,0,0,0,1.05798195854407,0,0,0,0,0,0,0,0,0,0,0,0,0.441737081903227,0,0.0958454710182364,0,0,0.127687338085188,0,0.395658863190582,0,0,0.279182999001381,0.56276261003168,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0.162241263067758,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,3.40912655116008,0.503653849092235,0,0,0,0,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@Gm1673 | |||
}} |
Revision as of 08:06, 4 August 2015
Short description: | p6@Gm1673 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Gm1673_5end |
Coexpression cluster: | MCL_coexpression_mm9:143 |
Association with transcript: | -336bp_to_ENSMUST00000114384, uc008xbp.1_5end |
EntrezGene: | 381633 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.56e-11 | 3 |
trophoblast cell | 4.56e-11 | 3 |
granule cell | 7.15e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 5.62e-30 | 1 |
vesicular gland | 5.62e-30 | 1 |
seminal fluid secreting gland | 5.62e-30 | 1 |
male accessory sex gland | 9.49e-16 | 2 |
sex gland | 9.49e-16 | 2 |
male reproductive gland | 9.49e-16 | 2 |
blastocyst | 4.56e-11 | 3 |
blastula | 4.56e-11 | 3 |
cleaving embryo | 4.56e-11 | 3 |
mesonephros | 1.46e-08 | 4 |
duct of male reproductive system | 1.46e-08 | 4 |
male genital duct | 1.46e-08 | 4 |
pronephros | 1.46e-08 | 4 |
internal male genitalia | 1.46e-08 | 4 |
nephrogenic cord | 1.46e-08 | 4 |
urogenital ridge | 1.46e-08 | 4 |
pronephric mesoderm | 1.46e-08 | 4 |
rostral part of nephrogenic cord | 1.46e-08 | 4 |
presumptive pronephric mesoderm | 1.46e-08 | 4 |