FFCP PHASE1:Mm9::chr5:3522260..3522265,+: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=115|UniProt=|association_with_transcript=-499bp_to_uc008wgw.1_5end|description=CAGE_peak_1_at_uc008wgw.1_5end|id=chr5:3522260..3522265,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!4.17e-16!193;UBERON:0004120!4.17e-16!193;UBERON:0006603!4.17e-16!193;UBERON:0003104!1.02e-13!131;UBERON:0009142!1.02e-13!131;UBERON:0001041!5.15e-13!92;UBERON:0000077!4.29e-12!97;UBERON:0001048!1.10e-11!147;UBERON:0004921!1.80e-10!126;UBERON:0004185!1.80e-10!126;UBERON:0001007!3.03e-10!128;UBERON:0001555!3.03e-10!128;UBERON:0007026!3.03e-10!128;UBERON:0004119!1.47e-09!130;UBERON:0000925!1.47e-09!130;UBERON:0006595!1.47e-09!130;UBERON:0003081!9.80e-09!88;UBERON:0000065!3.48e-08!41;UBERON:0001004!1.22e-07!42;UBERON:0000466!1.27e-07!79;UBERON:0005057!1.49e-07!51;UBERON:0002405!1.78e-07!70;UBERON:0009569!3.14e-07!66;UBERON:0003914!4.95e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0001041,2.83e-11,80;UBERON:0001048,5.30e-10,134;UBERON:0002100,5.04e-09,90;UBERON:0004921,7.24e-09,114;UBERON:0001007,1.19e-08,116;UBERON:0001555,1.19e-08,116;UBERON:0007026,1.19e-08,116;UBERON:0003081,1.23e-08,87;UBERON:0005177,2.69e-08,79;UBERON:0000065,5.01e-08,41;UBERON:0004119,6.18e-08,118;UBERON:0000925,6.18e-08,118;UBERON:0006595,6.18e-08,118;UBERON:0001004,1.73e-07,42;UBERON:0009569,4.93e-07,66;UBERON:0003914,7.04e-07,47|phase1_expression=1.92178616525753,0,0,0.30246421130683,0,1.17515490338323,2.56973904655078,2.45334314538995,0.563154888606667,0.468129052643987,5.13653904676515,5.18519033469687,0.684802919724823,0.174840804837995,6.66219523631325,5.06188168474565,7.69518065940961,2.05050407482854,4.66189074259512,2.97072756258621,1.7008658030214,24.8227378002213,19.3287843962812,2.23989391910769,2.98232065387321,1.14846392823004,1.29228598847722,0.646413698057667,2.47030445293286,1.76421090831952,1.77384408524244,0.635030673459631,0,0,4.04392267651784,6.15068187826422,4.49172583777212,2.51118978442145,0.7813353445238,2.09409497589519,2.35292595212406,2.04913645487534,1.45653105909346,6.54663453473002,3.34543873024398,6.9747765821439,0,6.32272953503295,0.878744730937887,1.36100929351998,2.93971485413261,5.75010257459886,2.85230430298152,2.90144856804538,3.36093799142464,11.3194151855817,5.44413535883638,8.25075347643908,0.809265843438391,1.05798195854407,0,1.0165335962074,0.889294796111139,0.899899717281399,1.97773272513395,1.4209602298922,0.599200221036809,1.15265491596466,4.56234294157302,4.72520784160917,4.41682418837902,0.285650984403804,0,1.83736198822431,1.34183659425531,2.75765635983006,0,0,0,0.527545150920775,1.73826522844578,0,0,0,0.15279824777681,1.17851434189467,2.27794689278565,1.4911955666024,2.34751199332871,2.04043212288321,0.579728977403356,2.58127163094416,5.439770669662,2.69851595818909,0.649776417447669,0.896053774194671,2.38755514223978,0.681721290312231,1.55871602761721,1.06001872353102,1.12674735821344,2.56652954828636,2.54805239706646,7.11066703153331,10.1750789275271,12.4146334082798,10.6160133453104,2.74041311325744,2.33044095282455,1.63286352971307,3.81667718885499,4.26251669636998,3.45923245884088,2.56228488939458,6.11461277105665,1.88499886994513,17.0564527736718,3.61498392299779,9.73071607144862,1.94120219936891,5.07935492458905,5.33362778448744,3.72783522436244,0.292780797011547,0.628340120440365,3.0654846625031,41.6956633280603,13.197860081855,34.9443124450928,0.149790639404823,0,0.753926112677186,0.173824320192276,0,0.41557608911912,0.486723789203273,6.11036183101898,8.21086006026614,6.82351447770922,2.31486041475121,2.47228841629137,1.83921683546778,3.06105620669094,3.91832526372859,5.3748834329549,4.09963904911519,3.5606655332697,2.06962696591213,4.31135985865684,1.32374256117473,1.75951124163949,2.19195732427575,1.94633074457919,2.43776516565517,6.37924622864625,4.97585667046233,30.1951670544691,17.2423097766859,33.8154564280755,2.89976081549703,4.92504725960302,3.42117916775928,4.7348947117042,5.50939848892731,5.39934895105824,7.44108623201305,4.82892122519315,3.50296027101508,3.78487654801005,8.86504306027114,3.24275238183423,7.16379938384128,4.83010253640311,3.75777972529041,0.210289948564127,2.05809224758569,1.32167513193519,2.3800550999719,3.41261200856374,5.10920678092965,2.57734922644187,4.43703754171354,1.77902435075896,4.94586627892654,4.2707615539006,3.78807595865225,6.28338022000674,2.78539060857611,3.50935356814416,6.29173586057955,5.83572734661674,3.78368419183298,0.758671603812327,3.77020091612105,2.25415471346161,3.86937522906097,3.10323979468201,2.66516115583211,4.17361145020098,2.06654207171443,4.70996183524124,2.46794327843601,5.03969466048153,2.33583148002532,3.73462090715086,4.49724224769707,3.85434230638156,5.30589751455317,5.0925170356284,4.89083433666378,7.45822043165163,10.9824565275233,33.0666875012915,7.81495990103857,8.11297950097858,6.31447194867779,5.74071723270119,4.82443521363367,6.28160846566456,1.51593129416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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=115 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-499bp_to_uc008wgw.1_5end | |||
|cluster_id=chr5:3522260..3522265,+ | |||
|description=CAGE_peak_1_at_uc008wgw.1_5end | |||
|id=chr5:3522260..3522265,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!4.17e-16!193;UBERON:0004120!4.17e-16!193;UBERON:0006603!4.17e-16!193;UBERON:0003104!1.02e-13!131;UBERON:0009142!1.02e-13!131;UBERON:0001041!5.15e-13!92;UBERON:0000077!4.29e-12!97;UBERON:0001048!1.10e-11!147;UBERON:0004921!1.80e-10!126;UBERON:0004185!1.80e-10!126;UBERON:0001007!3.03e-10!128;UBERON:0001555!3.03e-10!128;UBERON:0007026!3.03e-10!128;UBERON:0004119!1.47e-09!130;UBERON:0000925!1.47e-09!130;UBERON:0006595!1.47e-09!130;UBERON:0003081!9.80e-09!88;UBERON:0000065!3.48e-08!41;UBERON:0001004!1.22e-07!42;UBERON:0000466!1.27e-07!79;UBERON:0005057!1.49e-07!51;UBERON:0002405!1.78e-07!70;UBERON:0009569!3.14e-07!66;UBERON:0003914!4.95e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001041,2.83e-11,80;UBERON:0001048,5.30e-10,134;UBERON:0002100,5.04e-09,90;UBERON:0004921,7.24e-09,114;UBERON:0001007,1.19e-08,116;UBERON:0001555,1.19e-08,116;UBERON:0007026,1.19e-08,116;UBERON:0003081,1.23e-08,87;UBERON:0005177,2.69e-08,79;UBERON:0000065,5.01e-08,41;UBERON:0004119,6.18e-08,118;UBERON:0000925,6.18e-08,118;UBERON:0006595,6.18e-08,118;UBERON:0001004,1.73e-07,42;UBERON:0009569,4.93e-07,66;UBERON:0003914,7.04e-07,47 | |||
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| |||
|short_description=p1@uc008wgw.1 | |||
}} |
Latest revision as of 08:39, 4 August 2015
Short description: | p1@uc008wgw.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc008wgw.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:115 |
Association with transcript: | -499bp_to_uc008wgw.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
foregut | 2.83e-11 | 80 |
primordium | 5.30e-10 | 134 |
trunk | 5.04e-09 | 90 |
subdivision of digestive tract | 7.24e-09 | 114 |
digestive system | 1.19e-08 | 116 |
digestive tract | 1.19e-08 | 116 |
primitive gut | 1.19e-08 | 116 |
lateral plate mesoderm | 1.23e-08 | 87 |
trunk region element | 2.69e-08 | 79 |
respiratory tract | 5.01e-08 | 41 |
endoderm-derived structure | 6.18e-08 | 118 |
endoderm | 6.18e-08 | 118 |
presumptive endoderm | 6.18e-08 | 118 |
respiratory system | 1.73e-07 | 42 |
subdivision of trunk | 4.93e-07 | 66 |
epithelial tube | 7.04e-07 | 47 |