FFCP PHASE1:Mm9::chr19:55588734..55588745,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=74|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:55588734..55588745,+|id=chr19:55588734..55588745,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,7.83e-19,6;CL:0000677,7.83e-19,6;CL:0000584,7.83e-19,6;CL:0000075,3.43e-16,7;CL:0002563,1.16e-12,9;CL:0002251,1.16e-12,9;CL:0000682,4.52e-10,3;CL:0000066,1.06e-09,25;CL:0002076,1.09e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.62e-09!15;UBERON:0004923!1.00e-07!24;UBERON:0001242!1.29e-07!13;UBERON:0000060!1.29e-07!13;UBERON:0001262!1.29e-07!13;UBERON:0004786!1.29e-07!13;UBERON:0000014!2.02e-07!5;UBERON:0001003!2.02e-07!5;UBERON:0002097!2.02e-07!5;UBERON:0002199!2.02e-07!5;UBERON:0007029!2.02e-07!5;UBERON:0007376!2.02e-07!5;UBERON:0002416!2.02e-07!5;UBERON:0007383!2.02e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.89e-17,31;UBERON:0004923,1.70e-13,24;UBERON:0001242,1.77e-13,13;UBERON:0001262,1.77e-13,13;UBERON:0004786,1.77e-13,13;UBERON:0003350,1.16e-12,9;UBERON:0004808,1.16e-12,9;UBERON:0001277,1.16e-12,9;UBERON:0000344,1.11e-11,15;UBERON:0005409,5.12e-11,47;UBERON:0000485,2.09e-10,11;UBERON:0005631,1.54e-09,3;UBERON:0000478,1.54e-09,3;UBERON:0000158,1.54e-09,3;UBERON:0000305,8.96e-08,1|phase1_expression=0,2.09385244583617,2.72999543633722,3.93203474698879,3.50627010962443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.22940928106717,4.59385571292016,1.29228598847722,0.215471232685889,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0.484875253135222,0,0,0,0,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30140963567143,0.0680364991513279,0,0,0,0.215567992932842,0,0,0.219195732427575,0,0,0.823128545631774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2342386214491,2.3800550999719,0,0,0,0,0,0,1.42358718463353,0,0,0,0,0,1.29682829924817,1.7922714592893,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0591603543191,0.220528398054962,0.32977250588296,0.161464426695906,0.361877549568935,0.119372344003136,0.656563598980245,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0.64183841918363,0.505394423527595,0,0,0.187283014939765,0.256100609619477,0.287177344778066,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0,0,0,0.282328141245992,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0.29551344712669,0,0.619747364743864,0,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p@chr19:55588734..55588745,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=74 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:55588734..55588745,+ | |||
|description=CAGE_peak_at_chr19:55588734..55588745,+ | |||
|id=chr19:55588734..55588745,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,7.83e-19,6;CL:0000677,7.83e-19,6;CL:0000584,7.83e-19,6;CL:0000075,3.43e-16,7;CL:0002563,1.16e-12,9;CL:0002251,1.16e-12,9;CL:0000682,4.52e-10,3;CL:0000066,1.06e-09,25;CL:0002076,1.09e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.62e-09!15;UBERON:0004923!1.00e-07!24;UBERON:0001242!1.29e-07!13;UBERON:0000060!1.29e-07!13;UBERON:0001262!1.29e-07!13;UBERON:0004786!1.29e-07!13;UBERON:0000014!2.02e-07!5;UBERON:0001003!2.02e-07!5;UBERON:0002097!2.02e-07!5;UBERON:0002199!2.02e-07!5;UBERON:0007029!2.02e-07!5;UBERON:0007376!2.02e-07!5;UBERON:0002416!2.02e-07!5;UBERON:0007383!2.02e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.89e-17,31;UBERON:0004923,1.70e-13,24;UBERON:0001242,1.77e-13,13;UBERON:0001262,1.77e-13,13;UBERON:0004786,1.77e-13,13;UBERON:0003350,1.16e-12,9;UBERON:0004808,1.16e-12,9;UBERON:0001277,1.16e-12,9;UBERON:0000344,1.11e-11,15;UBERON:0005409,5.12e-11,47;UBERON:0000485,2.09e-10,11;UBERON:0005631,1.54e-09,3;UBERON:0000478,1.54e-09,3;UBERON:0000158,1.54e-09,3;UBERON:0000305,8.96e-08,1 | |||
|phase1_expression=0,2.09385244583617,2.72999543633722,3.93203474698879,3.50627010962443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.22940928106717,4.59385571292016,1.29228598847722,0.215471232685889,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0.484875253135222,0,0,0,0,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30140963567143,0.0680364991513279,0,0,0,0.215567992932842,0,0,0.219195732427575,0,0,0.823128545631774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2342386214491,2.3800550999719,0,0,0,0,0,0,1.42358718463353,0,0,0,0,0,1.29682829924817,1.7922714592893,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0591603543191,0.220528398054962,0.32977250588296,0.161464426695906,0.361877549568935,0.119372344003136,0.656563598980245,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0.64183841918363,0.505394423527595,0,0,0.187283014939765,0.256100609619477,0.287177344778066,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0,0,0,0.282328141245992,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0.29551344712669,0,0.619747364743864,0,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr19:55588734..55588745,+ | |||
}} |
Latest revision as of 08:45, 4 August 2015
Short description: | p@chr19:55588734..55588745, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:55588734..55588745, + |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 7.83e-19 | 6 |
gut absorptive cell | 7.83e-19 | 6 |
enterocyte | 7.83e-19 | 6 |
columnar/cuboidal epithelial cell | 3.43e-16 | 7 |
intestinal epithelial cell | 1.16e-12 | 9 |
epithelial cell of alimentary canal | 1.16e-12 | 9 |
M cell of gut | 4.52e-10 | 3 |
epithelial cell | 1.06e-09 | 25 |
endo-epithelial cell | 1.09e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.89e-17 | 31 |
organ component layer | 1.70e-13 | 24 |
intestinal mucosa | 1.77e-13 | 13 |
wall of intestine | 1.77e-13 | 13 |
gastrointestinal system mucosa | 1.77e-13 | 13 |
epithelium of mucosa | 1.16e-12 | 9 |
gastrointestinal system epithelium | 1.16e-12 | 9 |
intestinal epithelium | 1.16e-12 | 9 |
mucosa | 1.11e-11 | 15 |
gastrointestinal system | 5.12e-11 | 47 |
simple columnar epithelium | 2.09e-10 | 11 |
extraembryonic membrane | 1.54e-09 | 3 |
extraembryonic structure | 1.54e-09 | 3 |
membranous layer | 1.54e-09 | 3 |
amnion | 8.96e-08 | 1 |