FFCP PHASE1:Mm9::chr11:94622493..94622497,-: Difference between revisions
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{{FFCP|EntrezGene=217122|HGNC=|MCL_coexpression_id=12|UniProt=Q3TDT7|association_with_transcript=0bp_to_ENSMUST00000100556,NM_001105561,uc007kzk.2_5end|description=CAGE_peak_1_at_Gm11545_5end|id=chr11:94622493..94622497,-|ontology_enrichment_celltype=CL:0002563!1.78e-09!9;CL:0002251!1.78e-09!9;CL:0000239!6.11e-07!6;CL:0000677!6.11e-07!6;CL:0000212!6.11e-07!6;CL:0000584!6.11e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,4.29e-17,9;CL:0002251,4.29e-17,9;CL:0000239,3.94e-12,6;CL:0000677,3.94e-12,6;CL:0000584,3.94e-12,6;CL:0000075,2.93e-10,7;CL:0002076,1.96e-09,15;CL:0000066,3.71e-09,25;CL:0000682,7.48e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!5.03e-15!15;UBERON:0000160!7.21e-15!43;UBERON:0005409!2.50e-14!59;UBERON:0001242!4.07e-13!13;UBERON:0000060!4.07e-13!13;UBERON:0001262!4.07e-13!13;UBERON:0004786!4.07e-13!13;UBERON:0004923!1.45e-10!24;UBERON:0003350!1.78e-09!9;UBERON:0004808!1.78e-09!9;UBERON:0001277!1.78e-09!9;UBERON:0004119!2.99e-07!130;UBERON:0000925!2.99e-07!130;UBERON:0006595!2.99e-07!130;UBERON:0000485!3.79e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.49e-46,31;UBERON:0005409,2.46e-34,47;UBERON:0000344,5.12e-28,15;UBERON:0001242,2.96e-24,13;UBERON:0001262,2.96e-24,13;UBERON:0004786,2.96e-24,13;UBERON:0004923,3.45e-20,24;UBERON:0003350,4.29e-17,9;UBERON:0004808,4.29e-17,9;UBERON:0001277,4.29e-17,9;UBERON:0000485,1.32e-13,11;UBERON:0004119,3.85e-13,118;UBERON:0000925,3.85e-13,118;UBERON:0006595,3.85e-13,118;UBERON:0001007,1.32e-12,116;UBERON:0001555,1.32e-12,116;UBERON:0007026,1.32e-12,116;UBERON:0004921,7.72e-11,114;UBERON:0002108,2.27e-08,4;UBERON:0000331,8.91e-07,3;UBERON:0002116,8.91e-07,3;UBERON:0001204,8.91e-07,3;UBERON:0001168,8.91e-07,3|phase1_expression=0,74.6807372348233,68.7048851478199,58.9805212048319,58.1039046737763,24.0067358834002,24.7629399031257,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,55.8373555548989,59.1875945153299,45.9385571292016,56.8605834929979,53.6523369387864,68.0283841653819,41.8370015401485,37.4724563007465,0,0,0,39.5726719059246,38.4002030778117,39.813024471162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,4.49422144421606,0,0,0,0,0,0,0,0.216491041011214,0,0.505524445014783,11.418387971906,0,0.29688427812965,0,0,0,0,0,0,3.46072954828123,0,0,0,0,0,20.5030937339934,0,0,89.6654263782156,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0.252722758433675,0.210441855886474,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.1449621540998,76.1617631991007,0,0,2.57734922644187,7.46229041106367,8.2279876222602,13.3157938278791,33.6915633696603,9.88193728344065,7.54005626400809,7.95825888164603,8.96834800747953,53.9291645192533,41.9307816756907,30.4686148079182,0,0,0,0.203651327845314,0,0,0,0,0,0,0.592905254174298,0,0,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.9358059645788,0.178065603667255,0,14.6823409445557,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0.469343416127421,1.27099242518292,0.220528398054962,0,0,0,0.119372344003136,0,34.6862195589522,0,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0.609958401380546,1.51207477150522,0.418176592028937,1.31017538247707,0.269728692769641,0.247960367176008,0.523511883968059,3.75883422546199,0,0,0,0,0.194451188344048,0,0.168956125490778,0,0,0,0,0.864090018773596,0.632022241256357,0,0,0.129920822977795,0.179026695667481,0.39736270956253,0,0,0,0,0.201652370273681,0.779663045918019,0.288635524920988,0.350630706544707,1.13365191807606,0,0,0,0,0.93841237725591,16.1173429355193,1.07184189539533,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.735374033800057,0.666740183404846,0.824140228955577,0.64183841918363,1.01078884705519,0.50695859978048,0.754505365544305,0.37456602987953,0.448176066834085,0.574354689556133,0.476293691283074,0.231768651889711,0.964546102318525,0.824171801606613,0.441596760403192,0.342869252385415,0.532427418478012,0.238436189947321,1.45346416632329,0.376437521661322,0.423073039458382,0.73171189149109,0.263069711437843,0.543216455383447,0,0.593175090620871,0.394017929502254,0.818462086339379,0.77468420592983,0.192906610981141,0,0.935726433781634,0.214871054048298,0.191288332068843,0.220591419119515,0|short_description=p1@Gm11545}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:217122 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3TDT7 | |||
|association_with_transcript=0bp_to_ENSMUST00000100556,NM_001105561,uc007kzk.2_5end | |||
|cluster_id=chr11:94622493..94622497,- | |||
|description=CAGE_peak_1_at_Gm11545_5end | |||
|id=chr11:94622493..94622497,- | |||
|ontology_enrichment_celltype=CL:0002563!1.78e-09!9;CL:0002251!1.78e-09!9;CL:0000239!6.11e-07!6;CL:0000677!6.11e-07!6;CL:0000212!6.11e-07!6;CL:0000584!6.11e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.29e-17,9;CL:0002251,4.29e-17,9;CL:0000239,3.94e-12,6;CL:0000677,3.94e-12,6;CL:0000584,3.94e-12,6;CL:0000075,2.93e-10,7;CL:0002076,1.96e-09,15;CL:0000066,3.71e-09,25;CL:0000682,7.48e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.03e-15!15;UBERON:0000160!7.21e-15!43;UBERON:0005409!2.50e-14!59;UBERON:0001242!4.07e-13!13;UBERON:0000060!4.07e-13!13;UBERON:0001262!4.07e-13!13;UBERON:0004786!4.07e-13!13;UBERON:0004923!1.45e-10!24;UBERON:0003350!1.78e-09!9;UBERON:0004808!1.78e-09!9;UBERON:0001277!1.78e-09!9;UBERON:0004119!2.99e-07!130;UBERON:0000925!2.99e-07!130;UBERON:0006595!2.99e-07!130;UBERON:0000485!3.79e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.49e-46,31;UBERON:0005409,2.46e-34,47;UBERON:0000344,5.12e-28,15;UBERON:0001242,2.96e-24,13;UBERON:0001262,2.96e-24,13;UBERON:0004786,2.96e-24,13;UBERON:0004923,3.45e-20,24;UBERON:0003350,4.29e-17,9;UBERON:0004808,4.29e-17,9;UBERON:0001277,4.29e-17,9;UBERON:0000485,1.32e-13,11;UBERON:0004119,3.85e-13,118;UBERON:0000925,3.85e-13,118;UBERON:0006595,3.85e-13,118;UBERON:0001007,1.32e-12,116;UBERON:0001555,1.32e-12,116;UBERON:0007026,1.32e-12,116;UBERON:0004921,7.72e-11,114;UBERON:0002108,2.27e-08,4;UBERON:0000331,8.91e-07,3;UBERON:0002116,8.91e-07,3;UBERON:0001204,8.91e-07,3;UBERON:0001168,8.91e-07,3 | |||
|phase1_expression=0,74.6807372348233,68.7048851478199,58.9805212048319,58.1039046737763,24.0067358834002,24.7629399031257,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,55.8373555548989,59.1875945153299,45.9385571292016,56.8605834929979,53.6523369387864,68.0283841653819,41.8370015401485,37.4724563007465,0,0,0,39.5726719059246,38.4002030778117,39.813024471162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,4.49422144421606,0,0,0,0,0,0,0,0.216491041011214,0,0.505524445014783,11.418387971906,0,0.29688427812965,0,0,0,0,0,0,3.46072954828123,0,0,0,0,0,20.5030937339934,0,0,89.6654263782156,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0.252722758433675,0.210441855886474,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.1449621540998,76.1617631991007,0,0,2.57734922644187,7.46229041106367,8.2279876222602,13.3157938278791,33.6915633696603,9.88193728344065,7.54005626400809,7.95825888164603,8.96834800747953,53.9291645192533,41.9307816756907,30.4686148079182,0,0,0,0.203651327845314,0,0,0,0,0,0,0.592905254174298,0,0,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.9358059645788,0.178065603667255,0,14.6823409445557,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0.469343416127421,1.27099242518292,0.220528398054962,0,0,0,0.119372344003136,0,34.6862195589522,0,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0.609958401380546,1.51207477150522,0.418176592028937,1.31017538247707,0.269728692769641,0.247960367176008,0.523511883968059,3.75883422546199,0,0,0,0,0.194451188344048,0,0.168956125490778,0,0,0,0,0.864090018773596,0.632022241256357,0,0,0.129920822977795,0.179026695667481,0.39736270956253,0,0,0,0,0.201652370273681,0.779663045918019,0.288635524920988,0.350630706544707,1.13365191807606,0,0,0,0,0.93841237725591,16.1173429355193,1.07184189539533,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.735374033800057,0.666740183404846,0.824140228955577,0.64183841918363,1.01078884705519,0.50695859978048,0.754505365544305,0.37456602987953,0.448176066834085,0.574354689556133,0.476293691283074,0.231768651889711,0.964546102318525,0.824171801606613,0.441596760403192,0.342869252385415,0.532427418478012,0.238436189947321,1.45346416632329,0.376437521661322,0.423073039458382,0.73171189149109,0.263069711437843,0.543216455383447,0,0.593175090620871,0.394017929502254,0.818462086339379,0.77468420592983,0.192906610981141,0,0.935726433781634,0.214871054048298,0.191288332068843,0.220591419119515,0 | |||
|short_description=p1@Gm11545 | |||
}} |
Revision as of 09:00, 4 August 2015
Short description: | p1@Gm11545 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm11545_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000100556, NM_001105561, uc007kzk.2_5end |
EntrezGene: | 217122 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.29e-17 | 9 |
epithelial cell of alimentary canal | 4.29e-17 | 9 |
brush border epithelial cell | 3.94e-12 | 6 |
gut absorptive cell | 3.94e-12 | 6 |
enterocyte | 3.94e-12 | 6 |
columnar/cuboidal epithelial cell | 2.93e-10 | 7 |
endo-epithelial cell | 1.96e-09 | 15 |
epithelial cell | 3.71e-09 | 25 |
M cell of gut | 7.48e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.49e-46 | 31 |
gastrointestinal system | 2.46e-34 | 47 |
mucosa | 5.12e-28 | 15 |
intestinal mucosa | 2.96e-24 | 13 |
wall of intestine | 2.96e-24 | 13 |
gastrointestinal system mucosa | 2.96e-24 | 13 |
organ component layer | 3.45e-20 | 24 |
epithelium of mucosa | 4.29e-17 | 9 |
gastrointestinal system epithelium | 4.29e-17 | 9 |
intestinal epithelium | 4.29e-17 | 9 |
simple columnar epithelium | 1.32e-13 | 11 |
endoderm-derived structure | 3.85e-13 | 118 |
endoderm | 3.85e-13 | 118 |
presumptive endoderm | 3.85e-13 | 118 |
digestive system | 1.32e-12 | 116 |
digestive tract | 1.32e-12 | 116 |
primitive gut | 1.32e-12 | 116 |
subdivision of digestive tract | 7.72e-11 | 114 |
small intestine | 2.27e-08 | 4 |
ileal mucosa | 8.91e-07 | 3 |
ileum | 8.91e-07 | 3 |
mucosa of small intestine | 8.91e-07 | 3 |
wall of small intestine | 8.91e-07 | 3 |