FFCP PHASE1:Mm9::chr4:101390187..101390198,+: Difference between revisions
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{{FFCP|EntrezGene=16847|HGNC=|UniProt=P48356,Q3US58,Q640Q2,Q3UNU8,A2AV69|association_with_transcript=175bp_to_NM_001122899,NM_010704,NM_146146,uc008tvw.2,uc008tvx.2,uc008tvy.2,uc008tvz.2_5end|description=CAGE_peak_7_at_Lepr_5end|id=chr4:101390187..101390198,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!3.27e-09!66;UBERON:0005172!3.01e-07!49;UBERON:0005173!3.01e-07!49;UBERON:0002417!3.01e-07!49;UBERON:0000916!3.01e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.27e-17,22;UBERON:0007499,1.27e-17,22;UBERON:0006925,1.27e-17,22;UBERON:0009497,1.27e-17,22;UBERON:0000015,1.27e-17,22;UBERON:0002423,1.27e-17,22;UBERON:0006235,1.27e-17,22;UBERON:0008835,1.27e-17,22;UBERON:0003894,1.27e-17,22;UBERON:0004161,1.27e-17,22;UBERON:0008836,1.27e-17,22;UBERON:0009854,8.35e-17,23;UBERON:0009856,8.35e-17,23;UBERON:0002365,2.29e-15,25;UBERON:0002330,2.29e-15,25;UBERON:0009569,5.09e-11,66;UBERON:0005911,1.88e-10,69;UBERON:0001041,2.90e-10,80;UBERON:0005177,7.11e-09,79;UBERON:0005256,5.42e-08,45;UBERON:0003914,1.34e-07,47;UBERON:0002100,1.54e-07,90;UBERON:0005172,3.08e-07,49;UBERON:0005173,3.08e-07,49;UBERON:0002417,3.08e-07,49;UBERON:0000916,3.08e-07,49|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.55994568650145,0,0,0,0,0.514518872071894,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.579728977403356,0,0.679971333707751,0,0,7.16843019355737,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,2.33044095282455,0.148442139064825,0.346970653532272,0.304465478312141,0,0.301445281105245,0.117588707135705,0.125666591329675,0.247194967734374,0,0,0.161766849947409,0.441683036920787,0.969750506270444,0,0,0,0.255457055208591,0,0,0,0.449371918214468,0,0,0,0,0.20778804455956,0,0.101839363850316,0.497627882440372,0.505445516867349,0.210441855886474,0.260240885925407,0.229902104433473,0,0.150704817835715,0.272145996605311,0,0.187403449119458,0.258703370739016,0,0,0,0.219195732427575,0.556094498451196,0.348252166522167,1.02891068203972,0.199034266818493,0,0,0,0,0,0,0.473489471170421,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0.243206428637567,0.146199987425332,0.219550115291051,0.268412837520744,0,0,0,0,0,0.232236671860439,0,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0,0.193952487167626,0.210407459670956,0.252946148497029,0.738050739898011,0.627994911365499,0.370191491765402,1.1858105083486,0,0,0,0,0.241177159752417,0,1.15078454980324,2.59416362840057,2.47105271869273,0,7.44281895337007,2.80833905803104,3.78868316920668,0.896987067609561,2.8946611281802,2.58654466233247,0,0.325929952884052,0,0,0,0.476087281772027,0.195133647857799,0.788175720530955,0.44292937929755,0.478364305972461,2.13022309130459,1.38147985492716,1.88043776155965,0,0,0,0,0.321101179975584,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0.425820255624806,0,0.325773918707152,1.31976098378028,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0.535106452806212,0.658196082408484,0.304464949114599,0.938686832254841,0.21183207086382,0,0.16488625294148,0.968786560175433,0.361877549568935,0.358117032009409,0,0.291480836629851,0.370850604021019,0.170870880797853,0.412773735926445,0.185194527369712,0.188368457004691,0.410082683163076,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.269728692769641,1.1571483801547,0.26175594198403,0.518459893167171,0,0,0,0,0,0.258319646955462,0.844780627453891,0.469428954583016,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.680191150845634,0,0,0,0.19318959403219,0.375364950902364,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,0.243106717068294,0,0,0.222246727801615,0.412070114477788,0,0,0,0.377252682772152,0.280924522409647,0.384150914429216,0.574354689556133,0.476293691283074,0.695305955669133,0,0.412085900803307,0,0,0.354951612318675,0.476872379894642,0,0.188218760830661,0.25384382367503,0,0.526139422875686,0.407412341537585,0,0.118635018124174,0.29551344712669,0.409231043169689,0.154936841185966,0.385813221962283,0.749431733813838,0,0.429742108096597,1.14772999241306,0.220591419119515,0.231867835620421|short_description=p7@Lepr}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16847 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P48356,uniprot:Q3US58,uniprot:Q640Q2,uniprot:Q3UNU8,uniprot:A2AV69 | |||
|association_with_transcript=175bp_to_NM_001122899,NM_010704,NM_146146,uc008tvw.2,uc008tvx.2,uc008tvy.2,uc008tvz.2_5end | |||
|cluster_id=chr4:101390187..101390198,+ | |||
|description=CAGE_peak_7_at_Lepr_5end | |||
|id=chr4:101390187..101390198,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!3.27e-09!66;UBERON:0005172!3.01e-07!49;UBERON:0005173!3.01e-07!49;UBERON:0002417!3.01e-07!49;UBERON:0000916!3.01e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.27e-17,22;UBERON:0007499,1.27e-17,22;UBERON:0006925,1.27e-17,22;UBERON:0009497,1.27e-17,22;UBERON:0000015,1.27e-17,22;UBERON:0002423,1.27e-17,22;UBERON:0006235,1.27e-17,22;UBERON:0008835,1.27e-17,22;UBERON:0003894,1.27e-17,22;UBERON:0004161,1.27e-17,22;UBERON:0008836,1.27e-17,22;UBERON:0009854,8.35e-17,23;UBERON:0009856,8.35e-17,23;UBERON:0002365,2.29e-15,25;UBERON:0002330,2.29e-15,25;UBERON:0009569,5.09e-11,66;UBERON:0005911,1.88e-10,69;UBERON:0001041,2.90e-10,80;UBERON:0005177,7.11e-09,79;UBERON:0005256,5.42e-08,45;UBERON:0003914,1.34e-07,47;UBERON:0002100,1.54e-07,90;UBERON:0005172,3.08e-07,49;UBERON:0005173,3.08e-07,49;UBERON:0002417,3.08e-07,49;UBERON:0000916,3.08e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.55994568650145,0,0,0,0,0.514518872071894,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.579728977403356,0,0.679971333707751,0,0,7.16843019355737,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,2.33044095282455,0.148442139064825,0.346970653532272,0.304465478312141,0,0.301445281105245,0.117588707135705,0.125666591329675,0.247194967734374,0,0,0.161766849947409,0.441683036920787,0.969750506270444,0,0,0,0.255457055208591,0,0,0,0.449371918214468,0,0,0,0,0.20778804455956,0,0.101839363850316,0.497627882440372,0.505445516867349,0.210441855886474,0.260240885925407,0.229902104433473,0,0.150704817835715,0.272145996605311,0,0.187403449119458,0.258703370739016,0,0,0,0.219195732427575,0.556094498451196,0.348252166522167,1.02891068203972,0.199034266818493,0,0,0,0,0,0,0.473489471170421,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0.243206428637567,0.146199987425332,0.219550115291051,0.268412837520744,0,0,0,0,0,0.232236671860439,0,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0,0.193952487167626,0.210407459670956,0.252946148497029,0.738050739898011,0.627994911365499,0.370191491765402,1.1858105083486,0,0,0,0,0.241177159752417,0,1.15078454980324,2.59416362840057,2.47105271869273,0,7.44281895337007,2.80833905803104,3.78868316920668,0.896987067609561,2.8946611281802,2.58654466233247,0,0.325929952884052,0,0,0,0.476087281772027,0.195133647857799,0.788175720530955,0.44292937929755,0.478364305972461,2.13022309130459,1.38147985492716,1.88043776155965,0,0,0,0,0.321101179975584,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0.425820255624806,0,0.325773918707152,1.31976098378028,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0.535106452806212,0.658196082408484,0.304464949114599,0.938686832254841,0.21183207086382,0,0.16488625294148,0.968786560175433,0.361877549568935,0.358117032009409,0,0.291480836629851,0.370850604021019,0.170870880797853,0.412773735926445,0.185194527369712,0.188368457004691,0.410082683163076,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.269728692769641,1.1571483801547,0.26175594198403,0.518459893167171,0,0,0,0,0,0.258319646955462,0.844780627453891,0.469428954583016,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.680191150845634,0,0,0,0.19318959403219,0.375364950902364,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,0.243106717068294,0,0,0.222246727801615,0.412070114477788,0,0,0,0.377252682772152,0.280924522409647,0.384150914429216,0.574354689556133,0.476293691283074,0.695305955669133,0,0.412085900803307,0,0,0.354951612318675,0.476872379894642,0,0.188218760830661,0.25384382367503,0,0.526139422875686,0.407412341537585,0,0.118635018124174,0.29551344712669,0.409231043169689,0.154936841185966,0.385813221962283,0.749431733813838,0,0.429742108096597,1.14772999241306,0.220591419119515,0.231867835620421 | |||
|short_description=p7@Lepr | |||
}} |
Revision as of 10:52, 4 August 2015
Short description: | p7@Lepr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Lepr_5end |
Coexpression cluster: | NA |
Association with transcript: | 175bp_to_NM_001122899, NM_010704, NM_146146, uc008tvw.2, uc008tvx.2, uc008tvy.2, uc008tvz.2_5end |
EntrezGene: | 16847 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 1.27e-17 | 22 |
epithelial sac | 1.27e-17 | 22 |
digestive gland | 1.27e-17 | 22 |
epithelium of foregut-midgut junction | 1.27e-17 | 22 |
anatomical boundary | 1.27e-17 | 22 |
hepatobiliary system | 1.27e-17 | 22 |
foregut-midgut junction | 1.27e-17 | 22 |
hepatic diverticulum | 1.27e-17 | 22 |
liver primordium | 1.27e-17 | 22 |
septum transversum | 1.27e-17 | 22 |
liver bud | 1.27e-17 | 22 |
digestive tract diverticulum | 8.35e-17 | 23 |
sac | 8.35e-17 | 23 |
exocrine gland | 2.29e-15 | 25 |
exocrine system | 2.29e-15 | 25 |
subdivision of trunk | 5.09e-11 | 66 |
endo-epithelium | 1.88e-10 | 69 |
foregut | 2.90e-10 | 80 |
trunk region element | 7.11e-09 | 79 |
trunk mesenchyme | 5.42e-08 | 45 |
epithelial tube | 1.34e-07 | 47 |
trunk | 1.54e-07 | 90 |
abdomen element | 3.08e-07 | 49 |
abdominal segment element | 3.08e-07 | 49 |
abdominal segment of trunk | 3.08e-07 | 49 |
abdomen | 3.08e-07 | 49 |