FFCP PHASE1:Mm9::chr7:146101105..146101114,-: Difference between revisions
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{{FFCP|EntrezGene=12176|HGNC=|MCL_coexpression_id=8|UniProt=|association_with_transcript=47bp_to_ENSMUST00000125359_5end|description=CAGE_peak_3_at_Bnip3_5end|id=chr7:146101105..146101114,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!5.62e-13!47;UBERON:0009854!1.34e-08!23;UBERON:0009856!1.34e-08!23;UBERON:0002107!4.17e-08!22;UBERON:0007499!4.17e-08!22;UBERON:0006925!4.17e-08!22;UBERON:0009497!4.17e-08!22;UBERON:0000015!4.17e-08!22;UBERON:0002423!4.17e-08!22;UBERON:0006235!4.17e-08!22;UBERON:0008835!4.17e-08!22;UBERON:0003894!4.17e-08!22;UBERON:0004161!4.17e-08!22;UBERON:0008836!4.17e-08!22;UBERON:0002365!8.28e-08!25;UBERON:0002330!8.28e-08!25;UBERON:0005256!9.49e-08!47;UBERON:0005172!3.84e-07!49;UBERON:0005173!3.84e-07!49;UBERON:0002417!3.84e-07!49;UBERON:0000916!3.84e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.90e-19,47;UBERON:0009854,3.39e-15,23;UBERON:0009856,3.39e-15,23;UBERON:0002107,2.69e-14,22;UBERON:0007499,2.69e-14,22;UBERON:0006925,2.69e-14,22;UBERON:0009497,2.69e-14,22;UBERON:0000015,2.69e-14,22;UBERON:0002423,2.69e-14,22;UBERON:0006235,2.69e-14,22;UBERON:0008835,2.69e-14,22;UBERON:0003894,2.69e-14,22;UBERON:0004161,2.69e-14,22;UBERON:0008836,2.69e-14,22;UBERON:0002365,3.84e-13,25;UBERON:0002330,3.84e-13,25;UBERON:0005172,1.14e-10,49;UBERON:0005173,1.14e-10,49;UBERON:0002417,1.14e-10,49;UBERON:0000916,1.14e-10,49;UBERON:0005256,7.87e-10,45;UBERON:0003104,1.56e-08,61;UBERON:0009142,1.56e-08,61;UBERON:0009569,7.96e-08,66;UBERON:0007100,8.35e-07,18;UBERON:0000948,8.35e-07,18;UBERON:0005498,8.35e-07,18;UBERON:0004140,8.35e-07,18;UBERON:0009881,8.35e-07,18;UBERON:0004141,8.35e-07,18;UBERON:0003084,8.35e-07,18;UBERON:0007005,8.35e-07,18;UBERON:0004139,8.35e-07,18;UBERON:0004291,8.35e-07,18;UBERON:0005177,9.07e-07,79|phase1_expression=0.480446541314382,1.74487703819681,0,0.30246421130683,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0.198581902401771,0.261199789138935,0.319984845586813,1.14704640533585,0,0.86152399231815,0.430942465371778,0.950117097281869,0.252030129759931,0,0,0.61506478758457,0,0,0,0.204169356262369,0,0.7813353445238,0,0,0,0,0.377690453926732,0.405507724878058,0.183546752161682,0,0,0.659058548203415,0.194429899074283,0.279972843250725,0,0,0,0,0.771778308107841,0,1.54701627683233,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0,0.122490799214954,0,0,1.10115880999389,0.255374676170375,0.46081959976873,0,0.182975287204819,0,0.558365998002762,0.56276261003168,0.61119299110724,0,0.284743361598206,0.186399445825301,0.227178579999552,0.226714680320357,0,15.487629785665,23.7989966797713,14.5719861742211,16.2444104361917,38.0822854032735,4.91555470461132,0.852151612890289,2.59786004602869,1.41335829804136,0.281686839553361,0,0,0,0.216491041011214,0.253359865475099,1.01104889002957,12.3318590096585,0,0.742210695324124,0.346970653532272,0.304465478312141,1.15307748628029,1.80867168663147,1.99900802130698,2.76466500925286,5.19109432242185,6.07317299063629,0,0.808834249737046,1.32504911076236,0.484875253135222,1.86391761218122,0.585561594023094,0.41889341362691,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0.255715457330331,0.20778804455956,0.648965052271031,0,1.24406970610093,1.0108910337347,0.420883711772948,0.130120442962704,0,0.360124259610698,1.05493372485001,0.204109497453984,0.768682321709099,0.562210347358373,0.776110112217047,0,0,0.175951124163949,0,0.278047249225598,0,0.411564272815887,0,0,0,0,0.828503090142008,0.703578179943289,1.2604344302271,0.23674473558521,1.57411385397923,1.54267112887378,1.39520366850245,1.87791380979733,2.91913355917924,0.493679549740441,1.47750717671186,2.10778904819225,2.04679982395465,2.85415149878366,8.85762363818454,0.210289948564127,0.102904612379284,0,0.264450566663544,0,0.464473343720877,0.38660238396628,0.605050573870028,0,0.380451252225118,0.474529061544512,0.329397909448022,0.251335208800269,0.198956472041151,0,0.898819408654221,0,0,0.189667900953082,0.456994050438915,0,0.814605311381257,0.387904974335251,0.631222379012867,0.69560190836683,2.06654207171443,2.98297582898612,3.94870924549762,18.3800628794032,0.667380422864376,0,0.224862112384854,1.21716072833102,1.68824011826692,1.52775511068852,6.61701116136864,3.72911021582581,3.56929837144506,0,4.09355042435354,2.80833905803104,5.80931419278357,6.63770430031075,23.1572890254416,0.739012760666419,0,0.162964976442026,0,0.234690248288502,0.335012514883631,0.476087281772027,1.56106918286239,0,0,0.159454768657487,0.983179888294428,0.518054945597687,1.15719246865209,0,0,0.983528546038072,1.10374698521893,0.481651769963376,0.937693492737625,0.491804836130026,3.28212205365685,0.315508219416257,0,0.430846795465598,0.238968797952552,0.222798674082394,1.98153571552183,0,0.584511715822624,0.395287777946524,0,1.41940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0.485561272309963,0.302323556964751,0,0.590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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12176 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=47bp_to_ENSMUST00000125359_5end | |||
|cluster_id=chr7:146101105..146101114,- | |||
|description=CAGE_peak_3_at_Bnip3_5end | |||
|id=chr7:146101105..146101114,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!5.62e-13!47;UBERON:0009854!1.34e-08!23;UBERON:0009856!1.34e-08!23;UBERON:0002107!4.17e-08!22;UBERON:0007499!4.17e-08!22;UBERON:0006925!4.17e-08!22;UBERON:0009497!4.17e-08!22;UBERON:0000015!4.17e-08!22;UBERON:0002423!4.17e-08!22;UBERON:0006235!4.17e-08!22;UBERON:0008835!4.17e-08!22;UBERON:0003894!4.17e-08!22;UBERON:0004161!4.17e-08!22;UBERON:0008836!4.17e-08!22;UBERON:0002365!8.28e-08!25;UBERON:0002330!8.28e-08!25;UBERON:0005256!9.49e-08!47;UBERON:0005172!3.84e-07!49;UBERON:0005173!3.84e-07!49;UBERON:0002417!3.84e-07!49;UBERON:0000916!3.84e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.90e-19,47;UBERON:0009854,3.39e-15,23;UBERON:0009856,3.39e-15,23;UBERON:0002107,2.69e-14,22;UBERON:0007499,2.69e-14,22;UBERON:0006925,2.69e-14,22;UBERON:0009497,2.69e-14,22;UBERON:0000015,2.69e-14,22;UBERON:0002423,2.69e-14,22;UBERON:0006235,2.69e-14,22;UBERON:0008835,2.69e-14,22;UBERON:0003894,2.69e-14,22;UBERON:0004161,2.69e-14,22;UBERON:0008836,2.69e-14,22;UBERON:0002365,3.84e-13,25;UBERON:0002330,3.84e-13,25;UBERON:0005172,1.14e-10,49;UBERON:0005173,1.14e-10,49;UBERON:0002417,1.14e-10,49;UBERON:0000916,1.14e-10,49;UBERON:0005256,7.87e-10,45;UBERON:0003104,1.56e-08,61;UBERON:0009142,1.56e-08,61;UBERON:0009569,7.96e-08,66;UBERON:0007100,8.35e-07,18;UBERON:0000948,8.35e-07,18;UBERON:0005498,8.35e-07,18;UBERON:0004140,8.35e-07,18;UBERON:0009881,8.35e-07,18;UBERON:0004141,8.35e-07,18;UBERON:0003084,8.35e-07,18;UBERON:0007005,8.35e-07,18;UBERON:0004139,8.35e-07,18;UBERON:0004291,8.35e-07,18;UBERON:0005177,9.07e-07,79 | |||
|phase1_expression=0.480446541314382,1.74487703819681,0,0.30246421130683,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0.198581902401771,0.261199789138935,0.319984845586813,1.14704640533585,0,0.86152399231815,0.430942465371778,0.950117097281869,0.252030129759931,0,0,0.61506478758457,0,0,0,0.204169356262369,0,0.7813353445238,0,0,0,0,0.377690453926732,0.405507724878058,0.183546752161682,0,0,0.659058548203415,0.194429899074283,0.279972843250725,0,0,0,0,0.771778308107841,0,1.54701627683233,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0,0.122490799214954,0,0,1.10115880999389,0.255374676170375,0.46081959976873,0,0.182975287204819,0,0.558365998002762,0.56276261003168,0.61119299110724,0,0.284743361598206,0.186399445825301,0.227178579999552,0.226714680320357,0,15.487629785665,23.7989966797713,14.5719861742211,16.2444104361917,38.0822854032735,4.91555470461132,0.852151612890289,2.59786004602869,1.41335829804136,0.281686839553361,0,0,0,0.216491041011214,0.253359865475099,1.01104889002957,12.3318590096585,0,0.742210695324124,0.346970653532272,0.304465478312141,1.15307748628029,1.80867168663147,1.99900802130698,2.76466500925286,5.19109432242185,6.07317299063629,0,0.808834249737046,1.32504911076236,0.484875253135222,1.86391761218122,0.585561594023094,0.41889341362691,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0.255715457330331,0.20778804455956,0.648965052271031,0,1.24406970610093,1.0108910337347,0.420883711772948,0.130120442962704,0,0.360124259610698,1.05493372485001,0.204109497453984,0.768682321709099,0.562210347358373,0.776110112217047,0,0,0.175951124163949,0,0.278047249225598,0,0.411564272815887,0,0,0,0,0.828503090142008,0.703578179943289,1.2604344302271,0.23674473558521,1.57411385397923,1.54267112887378,1.39520366850245,1.87791380979733,2.91913355917924,0.493679549740441,1.47750717671186,2.10778904819225,2.04679982395465,2.85415149878366,8.85762363818454,0.210289948564127,0.102904612379284,0,0.264450566663544,0,0.464473343720877,0.38660238396628,0.605050573870028,0,0.380451252225118,0.474529061544512,0.329397909448022,0.251335208800269,0.198956472041151,0,0.898819408654221,0,0,0.189667900953082,0.456994050438915,0,0.814605311381257,0.387904974335251,0.631222379012867,0.69560190836683,2.06654207171443,2.98297582898612,3.94870924549762,18.3800628794032,0.667380422864376,0,0.224862112384854,1.21716072833102,1.68824011826692,1.52775511068852,6.61701116136864,3.72911021582581,3.56929837144506,0,4.09355042435354,2.80833905803104,5.80931419278357,6.63770430031075,23.1572890254416,0.739012760666419,0,0.162964976442026,0,0.234690248288502,0.335012514883631,0.476087281772027,1.56106918286239,0,0,0.159454768657487,0.983179888294428,0.518054945597687,1.15719246865209,0,0,0.983528546038072,1.10374698521893,0.481651769963376,0.937693492737625,0.491804836130026,3.28212205365685,0.315508219416257,0,0.430846795465598,0.238968797952552,0.222798674082394,1.98153571552183,0,0.584511715822624,0.395287777946524,0,1.41940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0.485561272309963,0.302323556964751,0,0.590603785761546,1.22974059177571,0.775284879504663,0,0.356497378384721,0.316036757935816,1.05418608574999,1.03135543248187,1.02131881726136,0,0.388076051348264,0.643011105094777,0,0.356737635204141,0,0.913394847343798,3.52007562095566,1.69465656691056,0.882113592219848,1.6488625294148,1.61464426695906,0.784068024066026,1.07435109602823,0.328281799490123,0.291480836629851,1.48340241608408,0,0.206386867963223,0.555583582109135,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0,0.216010681643603,0,0.436725127492355,1.34864346384821,1.48776220305605,1.57053565190418,0.259229946583586,0,0,0.299033092087958,0,0.194451188344048,0,0.506868376472335,0.117357238645754,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0,0,0.389762468933385,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0.15241361331,0.201652370273681,0,0,0.116876902181569,1.36038230169127,0.443971906748129,0.269141569828427,0.335769232728157,0.965947970160952,1.68914227906064,0,0.857473516316263,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0.415149390336707,0,0,0,1.25767897576789,0.735374033800057,0.666740183404846,0.618105171716683,0.64183841918363,0,0.50695859978048,0.754505365544305,0.468207537349412,0.704276676453562,1.14870937911227,0.476293691283074,1.0429589335037,1.54327376370964,1.23625770240992,1.17759136107518,0,0.532427418478012,1.1921809497366,0.726732083161643,0.564656282491984,0.338458431566706,0.73171189149109,0.263069711437843,0.543216455383447,0,0.830445126869219,1.47756723563345,1.22769312950907,1.39443157067369,0.964533054905707,0.499621155875892,1.16965804222704,1.28922632428979,4.01705497344571,0.441182838239031,1.39120701372253 | |||
|short_description=p3@Bnip3 | |||
}} |
Revision as of 10:53, 4 August 2015
Short description: | p3@Bnip3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Bnip3_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 47bp_to_ENSMUST00000125359_5end |
EntrezGene: | 12176 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube | 2.90e-19 | 47 |
digestive tract diverticulum | 3.39e-15 | 23 |
sac | 3.39e-15 | 23 |
liver | 2.69e-14 | 22 |
epithelial sac | 2.69e-14 | 22 |
digestive gland | 2.69e-14 | 22 |
epithelium of foregut-midgut junction | 2.69e-14 | 22 |
anatomical boundary | 2.69e-14 | 22 |
hepatobiliary system | 2.69e-14 | 22 |
foregut-midgut junction | 2.69e-14 | 22 |
hepatic diverticulum | 2.69e-14 | 22 |
liver primordium | 2.69e-14 | 22 |
septum transversum | 2.69e-14 | 22 |
liver bud | 2.69e-14 | 22 |
exocrine gland | 3.84e-13 | 25 |
exocrine system | 3.84e-13 | 25 |
abdomen element | 1.14e-10 | 49 |
abdominal segment element | 1.14e-10 | 49 |
abdominal segment of trunk | 1.14e-10 | 49 |
abdomen | 1.14e-10 | 49 |
trunk mesenchyme | 7.87e-10 | 45 |
mesenchyme | 1.56e-08 | 61 |
entire embryonic mesenchyme | 1.56e-08 | 61 |
subdivision of trunk | 7.96e-08 | 66 |
primary circulatory organ | 8.35e-07 | 18 |
heart | 8.35e-07 | 18 |
primitive heart tube | 8.35e-07 | 18 |
primary heart field | 8.35e-07 | 18 |
anterior lateral plate mesoderm | 8.35e-07 | 18 |
heart tube | 8.35e-07 | 18 |
heart primordium | 8.35e-07 | 18 |
cardiac mesoderm | 8.35e-07 | 18 |
cardiogenic plate | 8.35e-07 | 18 |
heart rudiment | 8.35e-07 | 18 |
trunk region element | 9.07e-07 | 79 |