FFCP PHASE1:Mm9::chr19:5953618..5953632,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=397 | |MCL_coexpression_id=397 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:5953618..5953632,+ | |||
|description=CAGE_peak_at_chr19:5953618..5953632,+ | |description=CAGE_peak_at_chr19:5953618..5953632,+ | ||
|id=chr19:5953618..5953632,+ | |id=chr19:5953618..5953632,+ | ||
|ontology_enrichment_celltype=CL:0000239!3.78e-09!6;CL:0000677!3.78e-09!6;CL:0000212!3.78e-09!6;CL:0000584!3.78e-09!6;CL:0000075!1.14e-07!7;CL:0000066!2.24e-07!25 | |ontology_enrichment_celltype=CL:0000239!3.78e-09!6;CL:0000677!3.78e-09!6;CL:0000212!3.78e-09!6;CL:0000584!3.78e-09!6;CL:0000075!1.14e-07!7;CL:0000066!2.24e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.60e-18,6;CL:0000677,2.60e-18,6;CL:0000584,2.60e-18,6;CL:0000473,2.61e-16,7;CL:0000075,1.10e-15,7;CL:0000682,8.53e-15,3;CL:0000066,2.80e-13,25;CL:0002563,3.58e-12,9;CL:0002251,3.58e-12,9;CL:0002076,4.60e-10,15;CL:0002476,9.54e-10,2;CL:0000223,1.97e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002369!2.15e-10!7;UBERON:0006858!2.15e-10!7;UBERON:0000344!3.41e-10!15;UBERON:0001242!1.08e-07!13;UBERON:0000060!1.08e-07!13;UBERON:0001262!1.08e-07!13;UBERON:0004786!1.08e-07!13;UBERON:0004923!2.28e-07!24;UBERON:0003064!4.68e-07!14;UBERON:0002342!8.53e-07!10;UBERON:0005062!8.53e-07!10 | |ontology_enrichment_uberon=UBERON:0002369!2.15e-10!7;UBERON:0006858!2.15e-10!7;UBERON:0000344!3.41e-10!15;UBERON:0001242!1.08e-07!13;UBERON:0000060!1.08e-07!13;UBERON:0001262!1.08e-07!13;UBERON:0004786!1.08e-07!13;UBERON:0004923!2.28e-07!24;UBERON:0003064!4.68e-07!14;UBERON:0002342!8.53e-07!10;UBERON:0005062!8.53e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.57e-18,15;UBERON:0002369,1.03e-15,7;UBERON:0006858,1.03e-15,7;UBERON:0003350,3.58e-12,9;UBERON:0004808,3.58e-12,9;UBERON:0001277,3.58e-12,9;UBERON:0001242,8.49e-12,13;UBERON:0001262,8.49e-12,13;UBERON:0004786,8.49e-12,13;UBERON:0004923,4.53e-11,24;UBERON:0003064,6.91e-11,14;UBERON:0001962,9.58e-11,2;UBERON:0001961,9.58e-11,2;UBERON:0001744,9.58e-11,2;UBERON:0000485,6.23e-10,11;UBERON:0002465,1.97e-07,3 | |||
|phase1_expression=0.160148847104794,4.53668029931169,2.72999543633722,0.30246421130683,1.00179145989269,2.85394762250213,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,7.99962113967033,11.4704640533585,2.8711598205751,4.73838195774982,5.817723282519,0.190023419456374,0.252030129759931,1.99557459589774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08245520505607,0.760079596425296,0,0.11418387971906,0,0.593768556259299,0.346970653532272,2.13125834818499,3.68984795609694,2.86373017049983,1.41106448562846,1.13099932196708,0.247194967734374,0.144599356919912,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0.342745537829186,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01582567878545,1.08781136763742,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0.322928853391811,0.120625849856312,0.238744688006273,0.164140899745061,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.41326727862668,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0.549454872801795,1.2862102744744,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0,0.287177344778066,0,0,0.38581844092741,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0,0,0,0.409231043169689,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,4.53668029931169,2.72999543633722,0.30246421130683,1.00179145989269,2.85394762250213,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,7.99962113967033,11.4704640533585,2.8711598205751,4.73838195774982,5.817723282519,0.190023419456374,0.252030129759931,1.99557459589774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08245520505607,0.760079596425296,0,0.11418387971906,0,0.593768556259299,0.346970653532272,2.13125834818499,3.68984795609694,2.86373017049983,1.41106448562846,1.13099932196708,0.247194967734374,0.144599356919912,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0.342745537829186,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01582567878545,1.08781136763742,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0.322928853391811,0.120625849856312,0.238744688006273,0.164140899745061,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.41326727862668,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0.549454872801795,1.2862102744744,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0,0.287177344778066,0,0,0.38581844092741,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0,0,0,0.409231043169689,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:5953618..5953632,+ | |short_description=p@chr19:5953618..5953632,+ | ||
}} | }} |
Latest revision as of 11:27, 4 August 2015
Short description: | p@chr19:5953618..5953632, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:5953618..5953632, + |
Coexpression cluster: | MCL_coexpression_mm9:397 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.60e-18 | 6 |
gut absorptive cell | 2.60e-18 | 6 |
enterocyte | 2.60e-18 | 6 |
defensive cell | 2.61e-16 | 7 |
columnar/cuboidal epithelial cell | 1.10e-15 | 7 |
M cell of gut | 8.53e-15 | 3 |
epithelial cell | 2.80e-13 | 25 |
intestinal epithelial cell | 3.58e-12 | 9 |
epithelial cell of alimentary canal | 3.58e-12 | 9 |
endo-epithelial cell | 4.60e-10 | 15 |
bone marrow macrophage | 9.54e-10 | 2 |
endodermal cell | 1.97e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.57e-18 | 15 |
adrenal gland | 1.03e-15 | 7 |
adrenal/interrenal gland | 1.03e-15 | 7 |
epithelium of mucosa | 3.58e-12 | 9 |
gastrointestinal system epithelium | 3.58e-12 | 9 |
intestinal epithelium | 3.58e-12 | 9 |
intestinal mucosa | 8.49e-12 | 13 |
wall of intestine | 8.49e-12 | 13 |
gastrointestinal system mucosa | 8.49e-12 | 13 |
organ component layer | 4.53e-11 | 24 |
intermediate mesoderm | 6.91e-11 | 14 |
gut-associated lymphoid tissue | 9.58e-11 | 2 |
mucosa-associated lymphoid tissue | 9.58e-11 | 2 |
lymphoid tissue | 9.58e-11 | 2 |
simple columnar epithelium | 6.23e-10 | 11 |
lymphoid system | 1.97e-07 | 3 |