FFCP PHASE1:Mm9::chr19:6263605..6263632,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=550|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:6263605..6263632,+|id=chr19:6263605..6263632,+|ontology_enrichment_celltype=CL:0002563!6.49e-19!9;CL:0002251!6.49e-19!9;CL:0000239!2.77e-13!6;CL:0000677!2.77e-13!6;CL:0000212!2.77e-13!6;CL:0000584!2.77e-13!6;CL:0000066!2.63e-12!25;CL:0000075!2.92e-11!7;CL:0002076!1.43e-10!15;CL:0000223!2.79e-09!20;CL:0000473!2.39e-07!3;CL:0000627!2.39e-07!3;CL:0000682!2.39e-07!3;CL:0002250!3.34e-07!3|ontology_enrichment_celltype_v019_2=CL:0000239,9.30e-22,6;CL:0000677,9.30e-22,6;CL:0000584,9.30e-22,6;CL:0000075,1.03e-18,7;CL:0002563,1.22e-14,9;CL:0002251,1.22e-14,9;CL:0002076,6.56e-09,15;CL:0000066,4.24e-08,25;CL:0000223,9.65e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.09e-32!43;UBERON:0000344!1.90e-31!15;UBERON:0001242!5.35e-27!13;UBERON:0000060!5.35e-27!13;UBERON:0001262!5.35e-27!13;UBERON:0004786!5.35e-27!13;UBERON:0005409!1.27e-23!59;UBERON:0003350!6.49e-19!9;UBERON:0004808!6.49e-19!9;UBERON:0001277!6.49e-19!9;UBERON:0004923!3.81e-18!24;UBERON:0000485!4.05e-15!11;UBERON:0001007!1.57e-11!128;UBERON:0001555!1.57e-11!128;UBERON:0007026!1.57e-11!128;UBERON:0004119!3.15e-11!130;UBERON:0000925!3.15e-11!130;UBERON:0006595!3.15e-11!130;UBERON:0004921!9.94e-10!126;UBERON:0004185!9.94e-10!126;UBERON:0000331!1.54e-07!3;UBERON:0002116!1.54e-07!3;UBERON:0001204!1.54e-07!3;UBERON:0001168!1.54e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.02e-33,15;UBERON:0001242,7.06e-22,13;UBERON:0001262,7.06e-22,13;UBERON:0004786,7.06e-22,13;UBERON:0004923,5.99e-21,24;UBERON:0001962,1.55e-17,2;UBERON:0001961,1.55e-17,2;UBERON:0001744,1.55e-17,2;UBERON:0001155,1.19e-16,2;UBERON:0000059,1.19e-16,2;UBERON:0000160,6.72e-16,31;UBERON:0003350,1.22e-14,9;UBERON:0004808,1.22e-14,9;UBERON:0001277,1.22e-14,9;UBERON:0000485,4.84e-12,11;UBERON:0002465,5.11e-12,3;UBERON:0005409,2.56e-10,47;UBERON:0003199,1.73e-09,1;UBERON:0001153,2.09e-09,1;UBERON:0001045,2.09e-09,1|phase1_expression=0,0.348975407639361,1.36499771816861,2.41971369045464,2.50447864973174,1.34303417529512,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,3.35984087866154,2.06468352960453,0.57423196411502,1.7230479846363,0.646413698057667,1.52018735565099,0.756090389279792,0.886922042621219,0,0,0,0.577703239502549,0.831173226792462,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0.528901133327089,0,0,0.38660238396628,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.597423819763102,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p@chr19:6263605..6263632,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=550 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:6263605..6263632,+ | |||
|description=CAGE_peak_at_chr19:6263605..6263632,+ | |||
|id=chr19:6263605..6263632,+ | |||
|ontology_enrichment_celltype=CL:0002563!6.49e-19!9;CL:0002251!6.49e-19!9;CL:0000239!2.77e-13!6;CL:0000677!2.77e-13!6;CL:0000212!2.77e-13!6;CL:0000584!2.77e-13!6;CL:0000066!2.63e-12!25;CL:0000075!2.92e-11!7;CL:0002076!1.43e-10!15;CL:0000223!2.79e-09!20;CL:0000473!2.39e-07!3;CL:0000627!2.39e-07!3;CL:0000682!2.39e-07!3;CL:0002250!3.34e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,9.30e-22,6;CL:0000677,9.30e-22,6;CL:0000584,9.30e-22,6;CL:0000075,1.03e-18,7;CL:0002563,1.22e-14,9;CL:0002251,1.22e-14,9;CL:0002076,6.56e-09,15;CL:0000066,4.24e-08,25;CL:0000223,9.65e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.09e-32!43;UBERON:0000344!1.90e-31!15;UBERON:0001242!5.35e-27!13;UBERON:0000060!5.35e-27!13;UBERON:0001262!5.35e-27!13;UBERON:0004786!5.35e-27!13;UBERON:0005409!1.27e-23!59;UBERON:0003350!6.49e-19!9;UBERON:0004808!6.49e-19!9;UBERON:0001277!6.49e-19!9;UBERON:0004923!3.81e-18!24;UBERON:0000485!4.05e-15!11;UBERON:0001007!1.57e-11!128;UBERON:0001555!1.57e-11!128;UBERON:0007026!1.57e-11!128;UBERON:0004119!3.15e-11!130;UBERON:0000925!3.15e-11!130;UBERON:0006595!3.15e-11!130;UBERON:0004921!9.94e-10!126;UBERON:0004185!9.94e-10!126;UBERON:0000331!1.54e-07!3;UBERON:0002116!1.54e-07!3;UBERON:0001204!1.54e-07!3;UBERON:0001168!1.54e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.02e-33,15;UBERON:0001242,7.06e-22,13;UBERON:0001262,7.06e-22,13;UBERON:0004786,7.06e-22,13;UBERON:0004923,5.99e-21,24;UBERON:0001962,1.55e-17,2;UBERON:0001961,1.55e-17,2;UBERON:0001744,1.55e-17,2;UBERON:0001155,1.19e-16,2;UBERON:0000059,1.19e-16,2;UBERON:0000160,6.72e-16,31;UBERON:0003350,1.22e-14,9;UBERON:0004808,1.22e-14,9;UBERON:0001277,1.22e-14,9;UBERON:0000485,4.84e-12,11;UBERON:0002465,5.11e-12,3;UBERON:0005409,2.56e-10,47;UBERON:0003199,1.73e-09,1;UBERON:0001153,2.09e-09,1;UBERON:0001045,2.09e-09,1 | |||
|phase1_expression=0,0.348975407639361,1.36499771816861,2.41971369045464,2.50447864973174,1.34303417529512,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,3.35984087866154,2.06468352960453,0.57423196411502,1.7230479846363,0.646413698057667,1.52018735565099,0.756090389279792,0.886922042621219,0,0,0,0.577703239502549,0.831173226792462,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0.528901133327089,0,0,0.38660238396628,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.597423819763102,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:6263605..6263632,+ | |||
}} |
Latest revision as of 12:12, 4 August 2015
Short description: | p@chr19:6263605..6263632, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:6263605..6263632, + |
Coexpression cluster: | MCL_coexpression_mm9:550 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 9.30e-22 | 6 |
gut absorptive cell | 9.30e-22 | 6 |
enterocyte | 9.30e-22 | 6 |
columnar/cuboidal epithelial cell | 1.03e-18 | 7 |
intestinal epithelial cell | 1.22e-14 | 9 |
epithelial cell of alimentary canal | 1.22e-14 | 9 |
endo-epithelial cell | 6.56e-09 | 15 |
epithelial cell | 4.24e-08 | 25 |
endodermal cell | 9.65e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.02e-33 | 15 |
intestinal mucosa | 7.06e-22 | 13 |
wall of intestine | 7.06e-22 | 13 |
gastrointestinal system mucosa | 7.06e-22 | 13 |
organ component layer | 5.99e-21 | 24 |
gut-associated lymphoid tissue | 1.55e-17 | 2 |
mucosa-associated lymphoid tissue | 1.55e-17 | 2 |
lymphoid tissue | 1.55e-17 | 2 |
colon | 1.19e-16 | 2 |
large intestine | 1.19e-16 | 2 |
intestine | 6.72e-16 | 31 |
epithelium of mucosa | 1.22e-14 | 9 |
gastrointestinal system epithelium | 1.22e-14 | 9 |
intestinal epithelium | 1.22e-14 | 9 |
simple columnar epithelium | 4.84e-12 | 11 |
lymphoid system | 5.11e-12 | 3 |
gastrointestinal system | 2.56e-10 | 47 |
egg chamber | 1.73e-09 | 1 |
caecum | 2.09e-09 | 1 |
midgut | 2.09e-09 | 1 |