FFCP PHASE1:Mm9::chr5:66155003..66155015,+: Difference between revisions
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{{FFCP|EntrezGene=333789|HGNC=|UniProt=|association_with_transcript=-202bp_to_ENSMUST00000137190,ENSMUST00000138607_5end|description=CAGE_peak_8_at_N4bp2_5end|id=chr5:66155003..66155015,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,1.98e-13,3;CL:0000351,1.98e-13,3;CL:0000553,9.57e-07,6;CL:0000556,9.57e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!5.84e-09!29;UBERON:0002370!2.80e-07!23;UBERON:0000974!2.80e-07!23;UBERON:0004807!2.80e-07!23;UBERON:0005058!2.80e-07!23;UBERON:0003351!2.80e-07!23;UBERON:0009113!2.80e-07!23;UBERON:0003295!2.80e-07!23;UBERON:0009722!2.80e-07!23;UBERON:0005562!2.80e-07!23;UBERON:0007690!2.80e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.01e-21,23;UBERON:0000974,1.01e-21,23;UBERON:0004807,1.01e-21,23;UBERON:0005058,1.01e-21,23;UBERON:0003351,1.01e-21,23;UBERON:0009113,1.01e-21,23;UBERON:0003295,1.01e-21,23;UBERON:0009722,1.01e-21,23;UBERON:0005562,1.01e-21,23;UBERON:0007690,1.01e-21,23;UBERON:0006562,9.88e-21,24;UBERON:0003408,9.88e-21,24;UBERON:0001557,9.88e-21,24;UBERON:0001042,9.88e-21,24;UBERON:0008814,9.88e-21,24;UBERON:0009145,9.88e-21,24;UBERON:0000072,3.34e-18,27;UBERON:0004177,8.32e-17,29;UBERON:0005057,8.32e-17,29;UBERON:0002390,1.10e-16,45;UBERON:0003061,1.10e-16,45;UBERON:0002193,1.79e-15,48;UBERON:0002405,1.79e-15,48;UBERON:0000077,1.42e-13,35;UBERON:0000358,1.98e-13,3;UBERON:0000307,1.98e-13,3;UBERON:0007010,1.98e-13,3;UBERON:0007811,3.86e-13,36;UBERON:0000065,2.76e-11,41;UBERON:0001004,5.74e-11,42;UBERON:0000153,1.15e-10,43;UBERON:0003081,1.78e-08,87;UBERON:0003929,6.88e-08,55;UBERON:0002368,4.63e-07,60|phase1_expression=0.320297694209588,0,0,0.30246421130683,0,0,0.233612640595526,0.387369970324729,0.140788722151667,0,0.171217968225505,0,0.171200729931206,0.0874204024189974,0.333109761815663,0.202475267389826,0,2.83915948822414,3.01651753932625,2.97072756258621,0,0.297872853602656,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0,0.683045484958446,0,0,0,0,0,0.218025156380447,0,0,0,0,6.04017381807851,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0.220868540951614,0,0.191690942036473,0,0,0,0.153606533256243,0.131886287730194,0.182975287204819,0,0.279182999001381,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.281686839553361,0,2.54805239706646,0,0,0.253359865475099,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0.494389935468748,0,0.884610551949874,0.647067399789637,1.10420759230197,0.484875253135222,0,0,0,0.255457055208591,0.599075622529601,1.19980546198682,0.381210681219194,0,0,0,0,0,0,0,0.203678727700633,0.622034853050465,0,0,0.390361328888111,0,0.180062129805349,0.150704817835715,0,0,0.187403449119458,0.258703370739016,0,0.378212160335639,0.175951124163949,0,0,0.696504333044333,0.411564272815887,0.199034266818493,0,0,0.284163499395593,0,0.703578179943289,0.180062061461015,0,0,0.154267112887378,0,0.268273401399619,0.350296027101508,0.329119699826961,0.164167464079095,0,0.438599962275997,0.219550115291051,0,0,0,0,0,0,0.464473343720877,0.257734922644187,0.605050573870028,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0,0.210407459670956,0.0632365371242573,0.295220295959204,0.156998727841375,0,0,0.166845105716094,0.589676985339609,0.224862112384854,0.202860121388503,0.72353147925725,0.50925170356284,0,0.810676133875177,0.274561413188081,0,0.744281895337007,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0,0.518054945597687,0.433947175744535,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0,0.214337035031592,0,0,0,0,0.704015124191131,0,0,0,0,0.241251699712623,0.119372344003136,0,0,0,0.854354403989263,0.82554747185289,0.925972636848558,0.188368457004691,0.956859594047176,0,1.5298058699447,0.279902904647316,1.52019971184866,0,0.158167996790568,0.406638934253697,0.324016022465404,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0.330916980914195,0.194451188344048,0.129159823477731,0.337912250981556,0.117357238645754,0.13020438484395,0.524296722128554,0.241584120826006,0,1.58005560314089,0.405450430580328,1.1298205288131,0.51968329191118,1.43221356533985,1.19208812868759,1.9231271923195,1.18151621739662,0.807731599585181,1.37172251979,1.81487133246313,1.07203668813728,1.34696578296461,1.98690733708667,0,4.88369097422942,5.20340368334959,3.69346156000973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62272408550506,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.280924522409647,0.128050304809739,0.229741875822453,0,0.347652977834566,0,0.824171801606613,0.147198920134397,0,0,0.238436189947321,0.290692833264657,0.188218760830661,0.338458431566706,0.182927972872773,0.263069711437843,0.271608227691724,0,0,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0,0.429742108096597,0,0.661774257358546,0|short_description=p8@N4bp2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:333789 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-202bp_to_ENSMUST00000137190,ENSMUST00000138607_5end | |||
|cluster_id=chr5:66155003..66155015,+ | |||
|description=CAGE_peak_8_at_N4bp2_5end | |||
|id=chr5:66155003..66155015,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.98e-13,3;CL:0000351,1.98e-13,3;CL:0000553,9.57e-07,6;CL:0000556,9.57e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!5.84e-09!29;UBERON:0002370!2.80e-07!23;UBERON:0000974!2.80e-07!23;UBERON:0004807!2.80e-07!23;UBERON:0005058!2.80e-07!23;UBERON:0003351!2.80e-07!23;UBERON:0009113!2.80e-07!23;UBERON:0003295!2.80e-07!23;UBERON:0009722!2.80e-07!23;UBERON:0005562!2.80e-07!23;UBERON:0007690!2.80e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.01e-21,23;UBERON:0000974,1.01e-21,23;UBERON:0004807,1.01e-21,23;UBERON:0005058,1.01e-21,23;UBERON:0003351,1.01e-21,23;UBERON:0009113,1.01e-21,23;UBERON:0003295,1.01e-21,23;UBERON:0009722,1.01e-21,23;UBERON:0005562,1.01e-21,23;UBERON:0007690,1.01e-21,23;UBERON:0006562,9.88e-21,24;UBERON:0003408,9.88e-21,24;UBERON:0001557,9.88e-21,24;UBERON:0001042,9.88e-21,24;UBERON:0008814,9.88e-21,24;UBERON:0009145,9.88e-21,24;UBERON:0000072,3.34e-18,27;UBERON:0004177,8.32e-17,29;UBERON:0005057,8.32e-17,29;UBERON:0002390,1.10e-16,45;UBERON:0003061,1.10e-16,45;UBERON:0002193,1.79e-15,48;UBERON:0002405,1.79e-15,48;UBERON:0000077,1.42e-13,35;UBERON:0000358,1.98e-13,3;UBERON:0000307,1.98e-13,3;UBERON:0007010,1.98e-13,3;UBERON:0007811,3.86e-13,36;UBERON:0000065,2.76e-11,41;UBERON:0001004,5.74e-11,42;UBERON:0000153,1.15e-10,43;UBERON:0003081,1.78e-08,87;UBERON:0003929,6.88e-08,55;UBERON:0002368,4.63e-07,60 | |||
|phase1_expression=0.320297694209588,0,0,0.30246421130683,0,0,0.233612640595526,0.387369970324729,0.140788722151667,0,0.171217968225505,0,0.171200729931206,0.0874204024189974,0.333109761815663,0.202475267389826,0,2.83915948822414,3.01651753932625,2.97072756258621,0,0.297872853602656,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0,0.683045484958446,0,0,0,0,0,0.218025156380447,0,0,0,0,6.04017381807851,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0.220868540951614,0,0.191690942036473,0,0,0,0.153606533256243,0.131886287730194,0.182975287204819,0,0.279182999001381,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.281686839553361,0,2.54805239706646,0,0,0.253359865475099,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0.494389935468748,0,0.884610551949874,0.647067399789637,1.10420759230197,0.484875253135222,0,0,0,0.255457055208591,0.599075622529601,1.19980546198682,0.381210681219194,0,0,0,0,0,0,0,0.203678727700633,0.622034853050465,0,0,0.390361328888111,0,0.180062129805349,0.150704817835715,0,0,0.187403449119458,0.258703370739016,0,0.378212160335639,0.175951124163949,0,0,0.696504333044333,0.411564272815887,0.199034266818493,0,0,0.284163499395593,0,0.703578179943289,0.180062061461015,0,0,0.154267112887378,0,0.268273401399619,0.350296027101508,0.329119699826961,0.164167464079095,0,0.438599962275997,0.219550115291051,0,0,0,0,0,0,0.464473343720877,0.257734922644187,0.605050573870028,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0,0.210407459670956,0.0632365371242573,0.295220295959204,0.156998727841375,0,0,0.166845105716094,0.589676985339609,0.224862112384854,0.202860121388503,0.72353147925725,0.50925170356284,0,0.810676133875177,0.274561413188081,0,0.744281895337007,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0,0.518054945597687,0.433947175744535,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0,0.214337035031592,0,0,0,0,0.704015124191131,0,0,0,0,0.241251699712623,0.119372344003136,0,0,0,0.854354403989263,0.82554747185289,0.925972636848558,0.188368457004691,0.956859594047176,0,1.5298058699447,0.279902904647316,1.52019971184866,0,0.158167996790568,0.406638934253697,0.324016022465404,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0.330916980914195,0.194451188344048,0.129159823477731,0.337912250981556,0.117357238645754,0.13020438484395,0.524296722128554,0.241584120826006,0,1.58005560314089,0.405450430580328,1.1298205288131,0.51968329191118,1.43221356533985,1.19208812868759,1.9231271923195,1.18151621739662,0.807731599585181,1.37172251979,1.81487133246313,1.07203668813728,1.34696578296461,1.98690733708667,0,4.88369097422942,5.20340368334959,3.69346156000973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62272408550506,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.280924522409647,0.128050304809739,0.229741875822453,0,0.347652977834566,0,0.824171801606613,0.147198920134397,0,0,0.238436189947321,0.290692833264657,0.188218760830661,0.338458431566706,0.182927972872773,0.263069711437843,0.271608227691724,0,0,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0,0.429742108096597,0,0.661774257358546,0 | |||
|short_description=p8@N4bp2 | |||
}} |
Revision as of 12:57, 4 August 2015
Short description: | p8@N4bp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_N4bp2_5end |
Coexpression cluster: | NA |
Association with transcript: | -202bp_to_ENSMUST00000137190, ENSMUST00000138607_5end |
EntrezGene: | 333789 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.98e-13 | 3 |
trophoblast cell | 1.98e-13 | 3 |
megakaryocyte progenitor cell | 9.57e-07 | 6 |
megakaryocyte | 9.57e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.01e-21 | 23 |
neck | 1.01e-21 | 23 |
respiratory system epithelium | 1.01e-21 | 23 |
hemolymphoid system gland | 1.01e-21 | 23 |
pharyngeal epithelium | 1.01e-21 | 23 |
thymic region | 1.01e-21 | 23 |
pharyngeal gland | 1.01e-21 | 23 |
entire pharyngeal arch endoderm | 1.01e-21 | 23 |
thymus primordium | 1.01e-21 | 23 |
early pharyngeal endoderm | 1.01e-21 | 23 |
pharynx | 9.88e-21 | 24 |
gland of gut | 9.88e-21 | 24 |
upper respiratory tract | 9.88e-21 | 24 |
chordate pharynx | 9.88e-21 | 24 |
pharyngeal arch system | 9.88e-21 | 24 |
pharyngeal region of foregut | 9.88e-21 | 24 |
segment of respiratory tract | 3.34e-18 | 27 |
hemopoietic organ | 8.32e-17 | 29 |
immune organ | 8.32e-17 | 29 |
hematopoietic system | 1.10e-16 | 45 |
blood island | 1.10e-16 | 45 |
hemolymphoid system | 1.79e-15 | 48 |
immune system | 1.79e-15 | 48 |
mixed endoderm/mesoderm-derived structure | 1.42e-13 | 35 |
blastocyst | 1.98e-13 | 3 |
blastula | 1.98e-13 | 3 |
cleaving embryo | 1.98e-13 | 3 |
craniocervical region | 3.86e-13 | 36 |
respiratory tract | 2.76e-11 | 41 |
respiratory system | 5.74e-11 | 42 |
anterior region of body | 1.15e-10 | 43 |
lateral plate mesoderm | 1.78e-08 | 87 |
gut epithelium | 6.88e-08 | 55 |
endocrine gland | 4.63e-07 | 60 |