FFCP PHASE1:Mm9::chr17:28389483..28389526,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=63 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:28389483..28389526,+ | |||
|description=CAGE_peak_at_chr17:28389483..28389526,+ | |description=CAGE_peak_at_chr17:28389483..28389526,+ | ||
|id=chr17:28389483..28389526,+ | |id=chr17:28389483..28389526,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.94e-17,6;CL:0000677,4.94e-17,6;CL:0000584,4.94e-17,6;CL:0000075,1.21e-14,7;CL:0002563,1.88e-11,9;CL:0002251,1.88e-11,9;CL:0000682,1.79e-09,3;CL:0000066,8.30e-09,25;CL:0002076,5.90e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,5.37e-20,3;UBERON:0000344,7.83e-15,15;UBERON:0001962,1.27e-13,2;UBERON:0001961,1.27e-13,2;UBERON:0001744,1.27e-13,2;UBERON:0001911,3.01e-13,2;UBERON:0000076,3.01e-13,2;UBERON:0005333,3.01e-13,2;UBERON:0008425,3.01e-13,2;UBERON:0005311,3.01e-13,2;UBERON:0003350,1.88e-11,9;UBERON:0004808,1.88e-11,9;UBERON:0001277,1.88e-11,9;UBERON:0000485,2.05e-09,11;UBERON:0004923,3.70e-09,24;UBERON:0000029,4.65e-08,1;UBERON:0001097,4.65e-08,1;UBERON:0003968,4.65e-08,1;UBERON:0001467,4.65e-08,1;UBERON:0001242,5.35e-08,13;UBERON:0001262,5.35e-08,13;UBERON:0004786,5.35e-08,13;UBERON:0001153,7.32e-08,1;UBERON:0001045,7.32e-08,1;UBERON:0003199,9.86e-08,1;UBERON:0001044,2.05e-07,1;UBERON:0001736,2.05e-07,1;UBERON:0003293,2.05e-07,1;UBERON:0003294,2.05e-07,1;UBERON:0001829,2.05e-07,1;UBERON:0010047,2.05e-07,1;UBERON:0000167,2.05e-07,1;UBERON:0006298,2.05e-07,1 | |||
|phase1_expression=0,1.04692622291808,2.72999543633722,0.30246421130683,0,1.84667199103079,1.16806320297763,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0,0,1.43993180514066,1.83527424853736,2.29692785646008,0.86152399231815,1.29282739611533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,19.9382170408322,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0.766371165625774,0,0,0,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0.251335208800269,0.596869416123452,0.19496408711912,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0,0.0632365371242573,0,0.31399745568275,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0.482443521363367,0.184753190166605,0,0,0,0,0,0.476087281772027,0,0.315270288212382,0,0,0.327726629431476,0.172684981865896,0,0,0,1.47529281905711,1.10374698521893,0,0,0,0,0,0,0,0,0,0.283076530788832,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,1.58018378967908,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0.120625849856312,0,0,0,0,0.170870880797853,0,0.370389054739423,0.188368457004691,0.683471138605126,0.228778173206523,0.169978429993855,0.419854356970974,0.276399947608848,0.954670618015114,0,0,0.108005340821801,0,0,0,0,0,0.129614973291793,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0.0762068066549998,0.201652370273681,0.194915761479505,0,0.116876902181569,0,0,0,0,0,0,0,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760437899670719,0.188626341386076,0.187283014939765,0.0640251524048693,0.114870937911227,0.476293691283074,0,0,0,0,0,0,0,0.290692833264657,0.470546902076653,0.0846146078916765,0,0,0,0,0.237270036248348,0,0.818462086339379,0,0.192906610981141,0,0,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0,1.04692622291808,2.72999543633722,0.30246421130683,0,1.84667199103079,1.16806320297763,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0,0,1.43993180514066,1.83527424853736,2.29692785646008,0.86152399231815,1.29282739611533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,19.9382170408322,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0.766371165625774,0,0,0,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0.251335208800269,0.596869416123452,0.19496408711912,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0,0.0632365371242573,0,0.31399745568275,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0.482443521363367,0.184753190166605,0,0,0,0,0,0.476087281772027,0,0.315270288212382,0,0,0.327726629431476,0.172684981865896,0,0,0,1.47529281905711,1.10374698521893,0,0,0,0,0,0,0,0,0,0.283076530788832,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,1.58018378967908,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0.120625849856312,0,0,0,0,0.170870880797853,0,0.370389054739423,0.188368457004691,0.683471138605126,0.228778173206523,0.169978429993855,0.419854356970974,0.276399947608848,0.954670618015114,0,0,0.108005340821801,0,0,0,0,0,0.129614973291793,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0.0762068066549998,0.201652370273681,0.194915761479505,0,0.116876902181569,0,0,0,0,0,0,0,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760437899670719,0.188626341386076,0.187283014939765,0.0640251524048693,0.114870937911227,0.476293691283074,0,0,0,0,0,0,0,0.290692833264657,0.470546902076653,0.0846146078916765,0,0,0,0,0.237270036248348,0,0.818462086339379,0,0.192906610981141,0,0,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p@chr17:28389483..28389526,+ | |short_description=p@chr17:28389483..28389526,+ | ||
}} | }} |
Latest revision as of 12:58, 4 August 2015
Short description: | p@chr17:28389483..28389526, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:28389483..28389526, + |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.94e-17 | 6 |
gut absorptive cell | 4.94e-17 | 6 |
enterocyte | 4.94e-17 | 6 |
columnar/cuboidal epithelial cell | 1.21e-14 | 7 |
intestinal epithelial cell | 1.88e-11 | 9 |
epithelial cell of alimentary canal | 1.88e-11 | 9 |
M cell of gut | 1.79e-09 | 3 |
epithelial cell | 8.30e-09 | 25 |
endo-epithelial cell | 5.90e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 5.37e-20 | 3 |
mucosa | 7.83e-15 | 15 |
gut-associated lymphoid tissue | 1.27e-13 | 2 |
mucosa-associated lymphoid tissue | 1.27e-13 | 2 |
lymphoid tissue | 1.27e-13 | 2 |
mammary gland | 3.01e-13 | 2 |
external ectoderm | 3.01e-13 | 2 |
mammary bud | 3.01e-13 | 2 |
mammary ridge | 3.01e-13 | 2 |
mammary placode | 3.01e-13 | 2 |
epithelium of mucosa | 1.88e-11 | 9 |
gastrointestinal system epithelium | 1.88e-11 | 9 |
intestinal epithelium | 1.88e-11 | 9 |
simple columnar epithelium | 2.05e-09 | 11 |
organ component layer | 3.70e-09 | 24 |
lymph node | 4.65e-08 | 1 |
axillary lymph node | 4.65e-08 | 1 |
peripheral lymph node | 4.65e-08 | 1 |
shoulder | 4.65e-08 | 1 |
intestinal mucosa | 5.35e-08 | 13 |
wall of intestine | 5.35e-08 | 13 |
gastrointestinal system mucosa | 5.35e-08 | 13 |
caecum | 7.32e-08 | 1 |
midgut | 7.32e-08 | 1 |
egg chamber | 9.86e-08 | 1 |
saliva-secreting gland | 2.05e-07 | 1 |
submandibular gland | 2.05e-07 | 1 |
gland of oral region | 2.05e-07 | 1 |
gland of foregut | 2.05e-07 | 1 |
major salivary gland | 2.05e-07 | 1 |
oral gland | 2.05e-07 | 1 |
oral cavity | 2.05e-07 | 1 |
submandibular gland primordium | 2.05e-07 | 1 |