FFCP PHASE1:Mm9::chr14:56853487..56853492,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=14940,14943|HGNC=|MCL_coexpression_id=258|UniProt=P08882,Q0VB76|association_with_transcript=0bp_to_ENSMUST00000015585,NM_010371,uc007ubt.1,uc007ubu.2_5end|description=CAGE_peak_1_at_Gzmc_5end,CAGE_peak_2_at_Gzmf_5end|id=chr14:56853487..56853492,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005795!3.91e-12!4;UBERON:0000995!3.91e-12!4;UBERON:0003975!1.09e-09!5;UBERON:0002370!3.68e-09!23;UBERON:0000974!3.68e-09!23;UBERON:0004807!3.68e-09!23;UBERON:0005058!3.68e-09!23;UBERON:0003351!3.68e-09!23;UBERON:0009113!3.68e-09!23;UBERON:0003295!3.68e-09!23;UBERON:0009722!3.68e-09!23;UBERON:0005562!3.68e-09!23;UBERON:0007690!3.68e-09!23;UBERON:0005631!4.02e-09!3;UBERON:0000478!4.02e-09!3;UBERON:0000158!4.02e-09!3;UBERON:0006562!1.06e-08!24;UBERON:0003408!1.06e-08!24;UBERON:0001557!1.06e-08!24;UBERON:0001042!1.06e-08!24;UBERON:0008814!1.06e-08!24;UBERON:0009145!1.06e-08!24;UBERON:0000474!1.10e-07!9;UBERON:0000072!1.59e-07!27;UBERON:0004177!7.05e-07!29;UBERON:0001987!7.10e-07!2;UBERON:0003124!7.10e-07!2;UBERON:0004340!7.10e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0005795,9.34e-51,4;UBERON:0000995,9.34e-51,4;UBERON:0003975,9.17e-41,5;UBERON:0001987,3.19e-26,2;UBERON:0003124,3.19e-26,2;UBERON:0004340,3.19e-26,2;UBERON:0003134,9.55e-26,8;UBERON:0004175,5.86e-23,9;UBERON:0000474,5.86e-23,9;UBERON:0003100,6.75e-19,11;UBERON:0005631,7.36e-18,3;UBERON:0000478,7.36e-18,3;UBERON:0000158,7.36e-18,3;UBERON:0006834,3.62e-14,1;UBERON:0003133,1.93e-13,24;UBERON:0005156,1.96e-12,26;UBERON:0000990,1.96e-12,26|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0,0,0,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0,0,0.599075622529601,0,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.210289948564127,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,89.4099207722736,3.81297727554876,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0,0,0,0,0,0,0,0,1.35982743995084,0.419854356970974,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,1.25831213310853,0.241584120826006,0,0,0,0.102710957164827,0.129920822977795,0,0.198681354781265,1.08175904567972,0.590758108698309,0.100966449948148,0.609654453239999,0.302478555410522,0,0.192423683280659,0.233753804363138,0,0,0,0,0,131.002367864925,1.46521299413812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Gzmc,p2@Gzmf}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14940,entrezgene:14943 | |||
|HGNC= | |||
|MCL_coexpression_id=258 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P08882,uniprot:Q0VB76 | |||
|association_with_transcript=0bp_to_ENSMUST00000015585,NM_010371,uc007ubt.1,uc007ubu.2_5end | |||
|cluster_id=chr14:56853487..56853492,- | |||
|description=CAGE_peak_1_at_Gzmc_5end,CAGE_peak_2_at_Gzmf_5end | |||
|id=chr14:56853487..56853492,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005795!3.91e-12!4;UBERON:0000995!3.91e-12!4;UBERON:0003975!1.09e-09!5;UBERON:0002370!3.68e-09!23;UBERON:0000974!3.68e-09!23;UBERON:0004807!3.68e-09!23;UBERON:0005058!3.68e-09!23;UBERON:0003351!3.68e-09!23;UBERON:0009113!3.68e-09!23;UBERON:0003295!3.68e-09!23;UBERON:0009722!3.68e-09!23;UBERON:0005562!3.68e-09!23;UBERON:0007690!3.68e-09!23;UBERON:0005631!4.02e-09!3;UBERON:0000478!4.02e-09!3;UBERON:0000158!4.02e-09!3;UBERON:0006562!1.06e-08!24;UBERON:0003408!1.06e-08!24;UBERON:0001557!1.06e-08!24;UBERON:0001042!1.06e-08!24;UBERON:0008814!1.06e-08!24;UBERON:0009145!1.06e-08!24;UBERON:0000474!1.10e-07!9;UBERON:0000072!1.59e-07!27;UBERON:0004177!7.05e-07!29;UBERON:0001987!7.10e-07!2;UBERON:0003124!7.10e-07!2;UBERON:0004340!7.10e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005795,9.34e-51,4;UBERON:0000995,9.34e-51,4;UBERON:0003975,9.17e-41,5;UBERON:0001987,3.19e-26,2;UBERON:0003124,3.19e-26,2;UBERON:0004340,3.19e-26,2;UBERON:0003134,9.55e-26,8;UBERON:0004175,5.86e-23,9;UBERON:0000474,5.86e-23,9;UBERON:0003100,6.75e-19,11;UBERON:0005631,7.36e-18,3;UBERON:0000478,7.36e-18,3;UBERON:0000158,7.36e-18,3;UBERON:0006834,3.62e-14,1;UBERON:0003133,1.93e-13,24;UBERON:0005156,1.96e-12,26;UBERON:0000990,1.96e-12,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0,0,0,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0,0,0.599075622529601,0,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.210289948564127,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,89.4099207722736,3.81297727554876,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0,0,0,0,0,0,0,0,1.35982743995084,0.419854356970974,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,1.25831213310853,0.241584120826006,0,0,0,0.102710957164827,0.129920822977795,0,0.198681354781265,1.08175904567972,0.590758108698309,0.100966449948148,0.609654453239999,0.302478555410522,0,0.192423683280659,0.233753804363138,0,0,0,0,0,131.002367864925,1.46521299413812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Gzmc,p2@Gzmf | |||
}} |
Revision as of 13:12, 4 August 2015
Short description: | p1@Gzmc, p2@Gzmf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gzmc_5end, CAGE_peak_2_at_Gzmf_5end |
Coexpression cluster: | MCL_coexpression_mm9:258 |
Association with transcript: | 0bp_to_ENSMUST00000015585, NM_010371, uc007ubt.1, uc007ubu.2_5end |
EntrezGene: | 14940,14943 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic uterus | 9.34e-51 | 4 |
uterus | 9.34e-51 | 4 |
internal female genitalia | 9.17e-41 | 5 |
placenta | 3.19e-26 | 2 |
chorion | 3.19e-26 | 2 |
allantois | 3.19e-26 | 2 |
female reproductive organ | 9.55e-26 | 8 |
internal genitalia | 5.86e-23 | 9 |
female reproductive system | 5.86e-23 | 9 |
female organism | 6.75e-19 | 11 |
extraembryonic membrane | 7.36e-18 | 3 |
extraembryonic structure | 7.36e-18 | 3 |
membranous layer | 7.36e-18 | 3 |
uterus or analog | 3.62e-14 | 1 |
reproductive organ | 1.93e-13 | 24 |
reproductive structure | 1.96e-12 | 26 |
reproductive system | 1.96e-12 | 26 |