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FFCP PHASE1:Mm9::chr11:99092280..99092302,-: Difference between revisions

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{{FFCP|EntrezGene=57376|HGNC=|MCL_coexpression_id=2755|UniProt=O54941,C0IMW9,A2A4L8,C0IMX1|association_with_transcript=28bp_to_ENSMUST00000103133,ENSMUST00000166012,NM_020618,uc007lii.1,uc007lij.1,uc011yej.1,uc011yek.1,uc011yel.1,uc011yem.1,uc011yen.1_5end|description=CAGE_peak_3_at_Smarce1_5end|id=chr11:99092280..99092302,-|ontology_enrichment_celltype=CL:0000540!7.84e-08!33;CL:0000047!7.84e-08!33;CL:0000031!7.84e-08!33;CL:0000404!7.84e-08!33;CL:0000393!3.46e-07!39;CL:0000211!3.46e-07!39|ontology_enrichment_celltype_v019_2=CL:0000540,9.39e-08,33;CL:0000047,9.39e-08,33;CL:0000031,9.39e-08,33;CL:0000404,9.39e-08,33;CL:0000393,2.08e-07,39;CL:0000211,2.08e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!5.56e-08!71;UBERON:0003075!5.56e-08!71;UBERON:0007284!5.56e-08!71;UBERON:0001017!8.81e-08!73;UBERON:0005743!8.81e-08!73;UBERON:0000073!2.43e-07!75;UBERON:0001016!2.43e-07!75;UBERON:0000153!3.70e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.67e-07,64;UBERON:0003075,3.67e-07,64;UBERON:0007284,3.67e-07,64|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.33575854382378,0.467225281191051,0.129123323441576,4.50523910885334,3.7450324211519,1.36974374580404,1.67521533890206,0.513602189793617,0.0874204024189974,0,0.607425802169478,0.699561878128147,0.157731082679119,0.137114433605739,0,0.255129870453209,0.893618560807968,0.261199789138935,0.47997726838022,0,0,0,0,0,0.252030129759931,0.221730510655305,0,0.61506478758457,0,0,0.332469290716985,0,0,0,0,0,0,0,1.6366586336825,1.01376931219515,1.10128051297009,1.56478268869608,0.65407546914134,0.219686182734472,0.388859798148567,0.279972843250725,1.43752564364972,0.503347818173209,0,0.336093799142464,0.771778308107841,0,0,4.04632921719196,4.23192783417626,1.90149421051854,1.35537812827653,2.66788438833342,0,0,0.7104801149461,0.599200221036809,0.384218305321555,1.97010263386108,1.89008313664367,2.73422449756797,0.571301968807607,1.76694832761291,2.44981598429908,2.1086003624012,2.75765635983006,1.10115880999389,0.127687338085188,0.614426133024974,5.14356522147756,4.39140689291566,3.12548022334056,0.558365998002762,0,0.45839474333043,0.883885756421003,0.569486723196412,3.35519002485541,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0,0.511290967734173,0.779358013808606,0.70667914902068,0.422530259330042,0,0,0,0.649473123033642,0.760079596425296,0,0.22836775943812,0.776813650941515,0.148442139064825,2.08182392119363,1.21786191324856,1.38369298353635,0.60289056221049,0.705532242814229,0.125666591329675,0,0.144599356919912,0,0.808834249737046,0.220841518460394,0.484875253135222,0,0,0.41889341362691,0,0.958520996047362,0.599902730993408,0.508280908292259,1.19832511523858,0,2.76439574648302,0.521472960576829,0,1.24672826735736,0.811206315338788,1.12023300235348,0.497627882440372,0,0.631325567659422,5.59517904739626,2.75882525320168,3.96136685571768,2.10986744970001,1.42876648217788,1.7935920839879,1.12442069471675,0,13.7963515477019,5.67318240503458,2.99116911078713,3.28793598641362,2.50242524303038,1.0447564995665,1.02891068203972,2.58744546864041,0,0.51469581422943,0.284163499395593,2.07125772535502,3.28336483973535,0.36012412292203,0.946978942340841,1.57411385397923,1.07986979021165,0,0.268273401399619,0.467061369468678,0.16455984991348,0.164167464079095,0,0.146199987425332,0,0,0.420579897128254,2.16099685996497,0,0.264450566663544,3.41261200856374,2.78684006232526,1.15980715189884,0.201683524623343,0.22237804384487,0.380451252225118,0,0.164698954724011,0,0.397912944082302,0.38992817423824,0,0,0,2.27601481143698,2.05647322697512,1.1270773567308,2.44381593414377,1.35766741017338,0.771494018793504,0.442655759869801,0.147610147979602,0.156998727841375,0,0,0.166845105716094,1.37591296579242,0,1.01430060694251,0.72353147925725,0.50925170356284,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0,3.60033682363921,2.93336957595647,1.01847051465113,1.40814148973101,0.502518772325447,0,0.195133647857799,0.315270288212382,0,0.478364305972461,0,0,0,0,0,0,0,0.642202359951168,0.586058432961016,1.14754461763673,0,1.26203287766503,2.34263246577983,2.15423397732799,0.955875191810208,1.33679204449436,1.13230612315533,1.21443210502468,2.92255857911312,0.790575555893047,0.642642632843614,0,1.95872164033981,1.30309567482861,0.494910368917606,0,1.21390318077491,0.604647113929502,0.188605079755898,0.590603785761546,0.307435147943927,0,0,0.712994756769443,0.316036757935816,0,0,1.02131881726136,3.42116078659489,3.10460841078611,2.57204442037911,1.59606210278046,1.60531935841864,0.822745103010605,0.608929898229199,0,0.42366414172764,0,0,0.484393280087717,0.542816324353403,0.119372344003136,0.164140899745061,0,1.29797711407357,0.341741761595705,1.23832120777933,0.740778109478847,0.188368457004691,0.27338845544205,0.228778173206523,0.509935289981566,0.69975726161829,0.690999869022119,0,4.4287039101359,1.01659733563424,1.29606408986162,0.418176592028937,0,0.539457385539283,0.247960367176008,0,0,0,1.12738587736838,2.24274819065968,1.82004339502807,0.777804753376191,1.42075805825504,1.35164900392623,1.29092962510329,1.5624526181274,1.15345278868282,0,0,1.89606672376907,0.810900861160657,0.616265742988964,0.909445760844565,0.537080087002444,0.79472541912506,0.841368146639782,0.147689527174577,0.504832249740738,0.990688486514998,0.403304740547362,0.974578807397524,0.769694733122636,0.350630706544707,0,2.66383144048878,3.13998498133165,1.00730769818447,0.19318959403219,0.375364950902364,0.36630324853453,0,0,1.12950368523413,0.920650473014354,0,0.859265911718438,0.685082519770642,0,0,0.45032120322422,0,1.03552062350364,8.40677515431831,5.98537310101547,3.92687293234509,1.70174701947806,2.51535795153579,0.551530525350042,0.44449345560323,0.412070114477788,0.320919209591815,0.505394423527595,1.01391719956096,0.943131706930381,0.842773567228942,1.02440243847791,1.03383844120104,0.952587382566147,1.15884325944855,0.77163688185482,1.23625770240992,0.441596760403192,1.02860775715625,0.887379030796687,0.238436189947321,0.872078499793971,0.846984423737976,0.592302255241736,0.548783918618318,0.526139422875686,1.08643291076689,2.80571135828869,0.711810108745045,0.788035859004508,0,0.929621047115796,1.35034627686799,1.24905288968973,0.701794825336225,1.71896843238639,0.191288332068843,0,0|short_description=p3@Smarce1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:57376
|HGNC=
|MCL_coexpression_id=2755
|TSSclassifier=NA
|UniProt=uniprot:O54941,uniprot:C0IMW9,uniprot:A2A4L8,uniprot:C0IMX1
|association_with_transcript=28bp_to_ENSMUST00000103133,ENSMUST00000166012,NM_020618,uc007lii.1,uc007lij.1,uc011yej.1,uc011yek.1,uc011yel.1,uc011yem.1,uc011yen.1_5end
|cluster_id=chr11:99092280..99092302,-
|description=CAGE_peak_3_at_Smarce1_5end
|id=chr11:99092280..99092302,-
|ontology_enrichment_celltype=CL:0000540!7.84e-08!33;CL:0000047!7.84e-08!33;CL:0000031!7.84e-08!33;CL:0000404!7.84e-08!33;CL:0000393!3.46e-07!39;CL:0000211!3.46e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000540,9.39e-08,33;CL:0000047,9.39e-08,33;CL:0000031,9.39e-08,33;CL:0000404,9.39e-08,33;CL:0000393,2.08e-07,39;CL:0000211,2.08e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!5.56e-08!71;UBERON:0003075!5.56e-08!71;UBERON:0007284!5.56e-08!71;UBERON:0001017!8.81e-08!73;UBERON:0005743!8.81e-08!73;UBERON:0000073!2.43e-07!75;UBERON:0001016!2.43e-07!75;UBERON:0000153!3.70e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.67e-07,64;UBERON:0003075,3.67e-07,64;UBERON:0007284,3.67e-07,64
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.33575854382378,0.467225281191051,0.129123323441576,4.50523910885334,3.7450324211519,1.36974374580404,1.67521533890206,0.513602189793617,0.0874204024189974,0,0.607425802169478,0.699561878128147,0.157731082679119,0.137114433605739,0,0.255129870453209,0.893618560807968,0.261199789138935,0.47997726838022,0,0,0,0,0,0.252030129759931,0.221730510655305,0,0.61506478758457,0,0,0.332469290716985,0,0,0,0,0,0,0,1.6366586336825,1.01376931219515,1.10128051297009,1.56478268869608,0.65407546914134,0.219686182734472,0.388859798148567,0.279972843250725,1.43752564364972,0.503347818173209,0,0.336093799142464,0.771778308107841,0,0,4.04632921719196,4.23192783417626,1.90149421051854,1.35537812827653,2.66788438833342,0,0,0.7104801149461,0.599200221036809,0.384218305321555,1.97010263386108,1.89008313664367,2.73422449756797,0.571301968807607,1.76694832761291,2.44981598429908,2.1086003624012,2.75765635983006,1.10115880999389,0.127687338085188,0.614426133024974,5.14356522147756,4.39140689291566,3.12548022334056,0.558365998002762,0,0.45839474333043,0.883885756421003,0.569486723196412,3.35519002485541,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0,0.511290967734173,0.779358013808606,0.70667914902068,0.422530259330042,0,0,0,0.649473123033642,0.760079596425296,0,0.22836775943812,0.776813650941515,0.148442139064825,2.08182392119363,1.21786191324856,1.38369298353635,0.60289056221049,0.705532242814229,0.125666591329675,0,0.144599356919912,0,0.808834249737046,0.220841518460394,0.484875253135222,0,0,0.41889341362691,0,0.958520996047362,0.599902730993408,0.508280908292259,1.19832511523858,0,2.76439574648302,0.521472960576829,0,1.24672826735736,0.811206315338788,1.12023300235348,0.497627882440372,0,0.631325567659422,5.59517904739626,2.75882525320168,3.96136685571768,2.10986744970001,1.42876648217788,1.7935920839879,1.12442069471675,0,13.7963515477019,5.67318240503458,2.99116911078713,3.28793598641362,2.50242524303038,1.0447564995665,1.02891068203972,2.58744546864041,0,0.51469581422943,0.284163499395593,2.07125772535502,3.28336483973535,0.36012412292203,0.946978942340841,1.57411385397923,1.07986979021165,0,0.268273401399619,0.467061369468678,0.16455984991348,0.164167464079095,0,0.146199987425332,0,0,0.420579897128254,2.16099685996497,0,0.264450566663544,3.41261200856374,2.78684006232526,1.15980715189884,0.201683524623343,0.22237804384487,0.380451252225118,0,0.164698954724011,0,0.397912944082302,0.38992817423824,0,0,0,2.27601481143698,2.05647322697512,1.1270773567308,2.44381593414377,1.35766741017338,0.771494018793504,0.442655759869801,0.147610147979602,0.156998727841375,0,0,0.166845105716094,1.37591296579242,0,1.01430060694251,0.72353147925725,0.50925170356284,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0,3.60033682363921,2.93336957595647,1.01847051465113,1.40814148973101,0.502518772325447,0,0.195133647857799,0.315270288212382,0,0.478364305972461,0,0,0,0,0,0,0,0.642202359951168,0.586058432961016,1.14754461763673,0,1.26203287766503,2.34263246577983,2.15423397732799,0.955875191810208,1.33679204449436,1.13230612315533,1.21443210502468,2.92255857911312,0.790575555893047,0.642642632843614,0,1.95872164033981,1.30309567482861,0.494910368917606,0,1.21390318077491,0.604647113929502,0.188605079755898,0.590603785761546,0.307435147943927,0,0,0.712994756769443,0.316036757935816,0,0,1.02131881726136,3.42116078659489,3.10460841078611,2.57204442037911,1.59606210278046,1.60531935841864,0.822745103010605,0.608929898229199,0,0.42366414172764,0,0,0.484393280087717,0.542816324353403,0.119372344003136,0.164140899745061,0,1.29797711407357,0.341741761595705,1.23832120777933,0.740778109478847,0.188368457004691,0.27338845544205,0.228778173206523,0.509935289981566,0.69975726161829,0.690999869022119,0,4.4287039101359,1.01659733563424,1.29606408986162,0.418176592028937,0,0.539457385539283,0.247960367176008,0,0,0,1.12738587736838,2.24274819065968,1.82004339502807,0.777804753376191,1.42075805825504,1.35164900392623,1.29092962510329,1.5624526181274,1.15345278868282,0,0,1.89606672376907,0.810900861160657,0.616265742988964,0.909445760844565,0.537080087002444,0.79472541912506,0.841368146639782,0.147689527174577,0.504832249740738,0.990688486514998,0.403304740547362,0.974578807397524,0.769694733122636,0.350630706544707,0,2.66383144048878,3.13998498133165,1.00730769818447,0.19318959403219,0.375364950902364,0.36630324853453,0,0,1.12950368523413,0.920650473014354,0,0.859265911718438,0.685082519770642,0,0,0.45032120322422,0,1.03552062350364,8.40677515431831,5.98537310101547,3.92687293234509,1.70174701947806,2.51535795153579,0.551530525350042,0.44449345560323,0.412070114477788,0.320919209591815,0.505394423527595,1.01391719956096,0.943131706930381,0.842773567228942,1.02440243847791,1.03383844120104,0.952587382566147,1.15884325944855,0.77163688185482,1.23625770240992,0.441596760403192,1.02860775715625,0.887379030796687,0.238436189947321,0.872078499793971,0.846984423737976,0.592302255241736,0.548783918618318,0.526139422875686,1.08643291076689,2.80571135828869,0.711810108745045,0.788035859004508,0,0.929621047115796,1.35034627686799,1.24905288968973,0.701794825336225,1.71896843238639,0.191288332068843,0,0
|short_description=p3@Smarce1
}}

Revision as of 13:14, 4 August 2015

Short description:p3@Smarce1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Smarce1_5end
Coexpression cluster:MCL_coexpression_mm9:2755
Association with transcript: 28bp_to_ENSMUST00000103133, ENSMUST00000166012, NM_020618, uc007lii.1, uc007lij.1, uc011yej.1, uc011yek.1, uc011yel.1, uc011yem.1, uc011yen.1_5end
EntrezGene:57376
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Smarce1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.51
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.75
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.37
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.68
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.05
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.11
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.14
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.39
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.36
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.96
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C65.60
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C93.96
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E213.80
forelimb, embryo E12.CNhs10600.359-14H25.67
forelimb, embryo E13.CNhs10589.384-1E22.99
forelimb, embryo E14.CNhs10577.413-26A83.29
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G12.16
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I53.41
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F82.06
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G23.60
lung, embryo E14.CNhs10604.404-26F82.93
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E63.42
pituitary gland, embryo E13.CNhs11009.370-44C73.10
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E34.43
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.99
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.97
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.14
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I88.41
whole body, embryo E12.CNhs10587.857-27C95.99
whole body, embryo E13.CNhs10512.372-23H23.93
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron9.39e-0833
neuronal stem cell9.39e-0833
neuroblast9.39e-0833
electrically signaling cell9.39e-0833
electrically responsive cell2.08e-0739
electrically active cell2.08e-0739

Uber anatomy
Ontology termp-valuen
neurectoderm3.67e-0764
neural plate3.67e-0764
presumptive neural plate3.67e-0764
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