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FFCP PHASE1:Mm9::chr9:107877860..107877932,+: Difference between revisions

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{{FFCP|EntrezGene=74153|HGNC=|MCL_coexpression_id=542|UniProt=Q9DBK7,E9Q2Z8|association_with_transcript=0bp_to_ENSMUST00000035216,ENSMUST00000075082,NM_023738,uc009rno.1,uc009rnp.1,uc012han.1_5end|description=CAGE_peak_1_at_Uba7_5end|id=chr9:107877860..107877932,+|ontology_enrichment_celltype=CL:0002031!3.66e-08!25;CL:0000063!4.85e-07!66;CL:0000839!7.70e-07!13|ontology_enrichment_celltype_v019_2=CL:0002031,3.52e-08,25;CL:0000839,7.46e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!8.00e-16!70;UBERON:0004119!2.46e-15!130;UBERON:0000925!2.46e-15!130;UBERON:0006595!2.46e-15!130;UBERON:0001007!4.73e-15!128;UBERON:0001555!4.73e-15!128;UBERON:0007026!4.73e-15!128;UBERON:0004921!5.55e-14!126;UBERON:0004185!5.55e-14!126;UBERON:0002193!1.82e-12!48;UBERON:0002390!7.55e-11!45;UBERON:0003061!7.55e-11!45;UBERON:0003929!3.89e-09!55;UBERON:0004923!4.29e-09!24;UBERON:0000490!4.54e-09!66;UBERON:0005057!7.16e-09!51;UBERON:0003081!1.22e-08!88;UBERON:0005911!1.36e-08!69;UBERON:0000926!5.37e-08!193;UBERON:0004120!5.37e-08!193;UBERON:0006603!5.37e-08!193;UBERON:0005409!1.92e-07!59;UBERON:0000344!6.73e-07!15;UBERON:0000077!8.00e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.51e-16,118;UBERON:0000925,3.51e-16,118;UBERON:0006595,3.51e-16,118;UBERON:0001007,6.59e-16,116;UBERON:0001555,6.59e-16,116;UBERON:0007026,6.59e-16,116;UBERON:0004921,8.45e-15,114;UBERON:0002193,1.70e-12,48;UBERON:0002405,1.70e-12,48;UBERON:0002390,7.14e-11,45;UBERON:0003061,7.14e-11,45;UBERON:0003929,3.72e-09,55;UBERON:0004923,4.10e-09,24;UBERON:0000490,4.61e-09,66;UBERON:0005409,6.03e-09,47;UBERON:0005911,1.81e-08,69;UBERON:0003081,3.49e-08,87;UBERON:0000160,4.72e-08,31;UBERON:0001041,6.00e-07,80;UBERON:0000344,6.52e-07,15|phase1_expression=1.60148847104794,116.557786151547,126.489788550291,52.3263085560816,43.0770327753859,44.152248512827,53.4972946963754,62.8830585160476,5.77233760821834,9.59664557920173,3.08192342805909,2.15384829287408,73.4451131404873,82.3500190786956,49.9664642723494,98.8079304862351,93.7412916691716,82.1778940758209,67.8716446348407,61.5364995107144,11.9060606211498,27.4043025314443,24.0303806007821,76.9563553636286,95.6636702050099,82.1151708684479,89.5984952010876,102.348835525797,45.4155972500734,39.8207605020691,58.0933937916898,30.4814723260623,27.6779154413057,47.5445043046316,6.93243887403059,8.47796691328311,9.39179038806898,71.1503772252743,32.8160844699996,64.916944252751,93.5288065969313,80.5993672250966,78.6526771910469,8.81277725829041,10.5432008468295,2.56965453026354,6.25913075478431,1.09012578190223,1.09843091367236,1.74986909166855,2.09979632438044,0,53.5226513324179,42.071004236658,36.970317905671,13.1202312378333,9.74213695791773,9.7977697532714,0,0,0,0.338844532069132,3.55717918444456,40.9454371363037,51.4210508534827,41.2078466668738,16.4780060785123,7.30014780110954,0,0.135005938331691,0,0.571301968807607,0.883474163806454,0,0.0958454710182364,0,1.10115880999389,0.893811366596314,1.53606533256243,0.131886287730194,0.274462930807229,0,1.3959149950069,0.56276261003168,1.5279824777681,0,0.284743361598206,0.186399445825301,3.18050011999373,4.91215140694106,56.8134397855288,36.1378028332182,2.03991400112325,5.39703191637817,3.24888208723835,5.82434953226536,10.6737759300131,6.64678258054425,4.67614808285164,4.59341446863442,0.563373679106722,1.28326477414318,7.64415719119937,7.11066703153331,4.11332977921307,3.80039798212648,4.04419556011827,14.1588010851634,54.8948313332004,15.7348667408714,3.12273588179045,4.56698217468212,3.68984795609694,12.8114244469729,9.28950786372068,8.92232798440696,6.67426412882809,20.0993106118677,42.461306493594,7.60304194752823,18.7715290691335,29.0925151881133,20.5030937339934,1.17112318804619,0.628340120440365,55.9450950906815,10.3041007075091,3.59941638596045,11.3092502095028,2.54644086988199,4.11750542536764,0.376963056338593,1.73824320192276,0.767146371990992,3.32460871295296,1.78465389374533,6.51771928642024,26.9963126223902,13.8997517138521,6.94458124425364,1.43132487258974,0.229902104433473,0.540186389416048,1.9591626318643,2.24520447199382,1.15302348256365,1.3118241438362,7.24369438069244,0.646703978798527,0.378212160335639,0.879755620819744,0.43839146485515,1.94633074457919,3.1342694986995,3.49829631893504,2.38841120182192,9.12877143507205,6.94839349209731,8.24074148247219,6.00664740352955,10.5536726991493,3.6012412292203,5.20838418287463,4.52557733019029,4.9365476123961,6.97601834251224,8.31647544338819,6.65562451492866,5.43047504714485,11.6558899496158,13.5384911941579,16.9591985413385,22.6136618749782,19.4599307202539,2.3131894342054,0.102904612379284,96.482284631269,36.4941781995691,0.853153002140936,1.16118335930219,4.51036114627327,8.67239155880373,15.7888411129858,23.3977520118448,46.0293189698176,26.0224348463937,39.7109629904426,45.9589450415058,48.3510936055418,38.6492345721315,38.2564348278209,30.2694735346638,1.13800740571849,1.82797620175566,1.1270773567308,1.4255592949172,4.26695471768777,4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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:74153
|HGNC=
|MCL_coexpression_id=542
|TSSclassifier=NA
|UniProt=uniprot:Q9DBK7,uniprot:E9Q2Z8
|association_with_transcript=0bp_to_ENSMUST00000035216,ENSMUST00000075082,NM_023738,uc009rno.1,uc009rnp.1,uc012han.1_5end
|cluster_id=chr9:107877860..107877932,+
|description=CAGE_peak_1_at_Uba7_5end
|id=chr9:107877860..107877932,+
|ontology_enrichment_celltype=CL:0002031!3.66e-08!25;CL:0000063!4.85e-07!66;CL:0000839!7.70e-07!13
|ontology_enrichment_celltype_v019_2=CL:0002031,3.52e-08,25;CL:0000839,7.46e-07,13
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.51e-16,118;UBERON:0000925,3.51e-16,118;UBERON:0006595,3.51e-16,118;UBERON:0001007,6.59e-16,116;UBERON:0001555,6.59e-16,116;UBERON:0007026,6.59e-16,116;UBERON:0004921,8.45e-15,114;UBERON:0002193,1.70e-12,48;UBERON:0002405,1.70e-12,48;UBERON:0002390,7.14e-11,45;UBERON:0003061,7.14e-11,45;UBERON:0003929,3.72e-09,55;UBERON:0004923,4.10e-09,24;UBERON:0000490,4.61e-09,66;UBERON:0005409,6.03e-09,47;UBERON:0005911,1.81e-08,69;UBERON:0003081,3.49e-08,87;UBERON:0000160,4.72e-08,31;UBERON:0001041,6.00e-07,80;UBERON:0000344,6.52e-07,15
|phase1_expression=1.60148847104794,116.557786151547,126.489788550291,52.3263085560816,43.0770327753859,44.152248512827,53.4972946963754,62.8830585160476,5.77233760821834,9.59664557920173,3.08192342805909,2.15384829287408,73.4451131404873,82.3500190786956,49.9664642723494,98.8079304862351,93.7412916691716,82.1778940758209,67.8716446348407,61.5364995107144,11.9060606211498,27.4043025314443,24.0303806007821,76.9563553636286,95.6636702050099,82.1151708684479,89.5984952010876,102.348835525797,45.4155972500734,39.8207605020691,58.0933937916898,30.4814723260623,27.6779154413057,47.5445043046316,6.93243887403059,8.47796691328311,9.39179038806898,71.1503772252743,32.8160844699996,64.916944252751,93.5288065969313,80.5993672250966,78.6526771910469,8.81277725829041,10.5432008468295,2.56965453026354,6.25913075478431,1.09012578190223,1.09843091367236,1.74986909166855,2.09979632438044,0,53.5226513324179,42.071004236658,36.970317905671,13.1202312378333,9.74213695791773,9.7977697532714,0,0,0,0.338844532069132,3.55717918444456,40.9454371363037,51.4210508534827,41.2078466668738,16.4780060785123,7.30014780110954,0,0.135005938331691,0,0.571301968807607,0.883474163806454,0,0.0958454710182364,0,1.10115880999389,0.893811366596314,1.53606533256243,0.131886287730194,0.274462930807229,0,1.3959149950069,0.56276261003168,1.5279824777681,0,0.284743361598206,0.186399445825301,3.18050011999373,4.91215140694106,56.8134397855288,36.1378028332182,2.03991400112325,5.39703191637817,3.24888208723835,5.82434953226536,10.6737759300131,6.64678258054425,4.67614808285164,4.59341446863442,0.563373679106722,1.28326477414318,7.64415719119937,7.11066703153331,4.11332977921307,3.80039798212648,4.04419556011827,14.1588010851634,54.8948313332004,15.7348667408714,3.12273588179045,4.56698217468212,3.68984795609694,12.8114244469729,9.28950786372068,8.92232798440696,6.67426412882809,20.0993106118677,42.461306493594,7.60304194752823,18.7715290691335,29.0925151881133,20.5030937339934,1.17112318804619,0.628340120440365,55.9450950906815,10.3041007075091,3.59941638596045,11.3092502095028,2.54644086988199,4.11750542536764,0.376963056338593,1.73824320192276,0.767146371990992,3.32460871295296,1.78465389374533,6.51771928642024,26.9963126223902,13.8997517138521,6.94458124425364,1.43132487258974,0.229902104433473,0.540186389416048,1.9591626318643,2.24520447199382,1.15302348256365,1.3118241438362,7.24369438069244,0.646703978798527,0.378212160335639,0.879755620819744,0.43839146485515,1.94633074457919,3.1342694986995,3.49829631893504,2.38841120182192,9.12877143507205,6.94839349209731,8.24074148247219,6.00664740352955,10.5536726991493,3.6012412292203,5.20838418287463,4.52557733019029,4.9365476123961,6.97601834251224,8.31647544338819,6.65562451492866,5.43047504714485,11.6558899496158,13.5384911941579,16.9591985413385,22.6136618749782,19.4599307202539,2.3131894342054,0.102904612379284,96.482284631269,36.4941781995691,0.853153002140936,1.16118335930219,4.51036114627327,8.67239155880373,15.7888411129858,23.3977520118448,46.0293189698176,26.0224348463937,39.7109629904426,45.9589450415058,48.3510936055418,38.6492345721315,38.2564348278209,30.2694735346638,1.13800740571849,1.82797620175566,1.1270773567308,1.4255592949172,4.26695471768777,4.55882829287071,7.65162099203513,9.59465961867414,12.2459007716272,8.88459580236964,15.4155366085317,23.8588501174014,31.2528802229993,37.3271106558857,34.689080757434,27.4941962117755,24.6987076227977,58.4023159025146,44.2629169095847,29.1035097979366,21.5652309791032,27.9105710751378,16.8500343481863,15.6598904327209,11.8402292924462,8.20153986317724,39.72193588582,0.757965647081939,0.977789858652155,0.509235257325564,2.11221223459652,4.69017520837084,11.1880511216426,12.2934198150413,14.5024332577696,18.3815692408483,11.6401981119966,33.9197061461578,37.4726410648993,28.6405135991393,99.5222473999197,147.942345998689,12.7858710984949,15.1765210467603,2.24770825982909,1.28932855251423,1.3114795630134,8.58401152494868,0.631016438832513,0.780877488593277,1.29254038639679,4.06246956519338,2.89638276307112,1.41538265394416,4.04810701674894,4.09158201075837,1.97643888973262,1.92792789853084,13.200427924369,7.47875535402472,6.51547837414304,23.2607873391275,13.2745138339963,1.69946445308487,0.906970670894253,2.64047111658257,4.42952839321159,8.60818414242997,16.2809824695979,12.3601468022352,8.91243445961803,8.53299246426703,5.27093042874994,11.3449097573006,23.1498931912576,0.720244376125241,0.776152102696527,1.07168517515796,1.59606210278046,1.96205699362278,2.46823530903181,4.26250928760439,18.0697215209057,9.10877904714427,12.1290618930229,8.07942639413252,5.32832608096488,3.19658502119226,1.79058516004705,1.80554989719567,44.888048840997,3.15223013417866,64.5891929415883,10.9385040020508,44.8170756234702,71.956750575792,77.9157098009843,76.6406880241851,28.8963330989554,32.748639843736,29.98939431556,14.3200592702267,0.316335993581135,3.86306987541013,3.24016022465404,5.01811910434725,9.17122767733946,8.63131816862852,13.3898598275044,15.7053565190418,17.8868663142674,13.6694648879124,0,1.19613236835183,1.48912641411388,2.52786544847262,1.6790777052105,3.71703476079712,3.99014611395563,2.99470085141085,1.78260885523708,2.41584120826006,3.16833006883652,46.137623611714,9.93353554921804,22.3909886619323,21.0471733224028,19.1558564364205,23.4443998641893,29.2074942333524,24.811840565329,26.0493440866221,29.4920341754849,31.5585959478311,29.919569387104,35.2135340403606,46.2832532639013,6.80191150845634,0.443971906748129,0,0,15.8415467106396,25.7124991368119,36.8134764777203,11.1471557121114,18.0565957452731,0,0.460325236507177,0.572895513439397,0.68741272937475,1.37016503954128,2.2661816921691,4.05013500139084,0.45032120322422,0.906284817968409,0,0.415149390336707,3.19219898720825,4.95127456686989,7.53630822911712,4.40187641518763,3.67687016900028,4.4449345560323,5.15087643097235,6.4183841918363,4.54854981174835,6.59046179714623,5.47016390019621,6.46126401542189,6.59459069770154,6.26046611616185,8.09699275181225,4.86714168968393,6.36600427530227,7.41754621445952,5.88795680537589,3.08582327146874,6.56660482789549,8.34526664815623,5.95920308192547,7.34053167239579,7.36147088657586,8.41468675214754,6.05060336307039,5.83957689537206,5.61142271657738,5.33857581558784,6.30428687203606,4.50154147486658,5.88759996506671,7.52335782826451,2.74791635731741,10.9947855969342,13.5368764050428,4.3996316375834,9.70602244125868,9.27471342481686
|short_description=p1@Uba7
}}

Revision as of 13:15, 4 August 2015

Short description:p1@Uba7
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Uba7_5end
Coexpression cluster:MCL_coexpression_mm9:542
Association with transcript: 0bp_to_ENSMUST00000035216, ENSMUST00000075082, NM_023738, uc009rno.1, uc009rnp.1, uc012han.1_5end
EntrezGene:74153
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Uba7

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5116.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6126.49
CD326+ enterocyte, pool1.CNhs13542.11848-124I352.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I443.08
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I744.15
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I853.50
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E962.88
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F29.60
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.08
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.15
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E473.45
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E882.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A149.97
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A398.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A593.74
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A282.18
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A467.87
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A661.54
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H227.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I924.03
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D176.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D295.66
GP2+ M cell, pool1.CNhs13228.11845-124H982.12
GP2+ M cell, pool2.CNhs13231.11846-124I189.60
GP2+ M cell, pool3.CNhs13240.11847-124I2102.35
Ileum epithelium, pool1.CNhs13199.10252-104B945.42
Ileum epithelium, pool2.CNhs13232.10253-104C139.82
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C858.09
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I330.48
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G627.68
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.93
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F68.48
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F79.39
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G871.15
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H132.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H364.92
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G993.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H280.60
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H478.65
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D88.81
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D910.54
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.57
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A253.52
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I942.07
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A136.97
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C113.12
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E19.74
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.80
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C740.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E751.42
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D241.21
Mouse Microglia, donor1.CNhs12629.11718-123C816.48
Mouse Microglia, donor2.CNhs12634.11736-123E87.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D93.18
Mouse Schwann, donor2.CNhs12573.11746-123F94.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G356.81
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F736.14
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.59
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B614.16
accessory axillary lymph node, adult.CNhs10475.1063-29H954.89
adrenal gland, adult.CNhs10508.49-24D715.73
adrenal gland, embryo E14.CNhs11038.406-44C53.12
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I13.69
adrenal gland, embryo E18.CNhs11026.1262-18F512.81
adrenal gland, neonate N00.CNhs11191.1311-23C19.29
adrenal gland, neonate N25.CNhs11223.1377-27I38.92
amnion, adult pregnant day17.5.CNhs10488.583-22A86.67
aorta, adult.CNhs10498.46-23H120.10
bone (os femoris), adult.CNhs10483.56-12G242.46
bone (os femoris), neonate N02.CNhs11227.1985-43F57.60
bone (os femoris), neonate N16.CNhs11225.1525-43A618.77
bone (os femoris), neonate N20.CNhs11195.1350-25C329.09
cecum, adult.CNhs10467.37-13H420.50
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H755.95
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C710.30
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D411.31
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D51.74
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.52
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A227.00
epididymis, adult.CNhs10490.58-23B213.90
eyeball, adult.CNhs10484.31-12G46.94
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C62.25
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A27.24
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B53.50
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C89.13
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.95
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D58.24
heart, embryo E11.CNhs10586.331-24E96.01
heart, embryo E12.CNhs11015.353-12F510.55
heart, embryo E13.CNhs11013.376-3I93.60
heart, embryo E14.CNhs10597.403-26D45.21
heart, embryo E15.CNhs11017.431-16C84.53
heart, embryo E16.CNhs11021.457-17C64.94
heart, embryo E17.CNhs11025.479-18E56.98
heart, embryo E18.CNhs11030.1283-20G38.32
heart, neonate N00.CNhs11213.639-21E36.66
heart, neonate N03.CNhs11221.1349-25I25.43
heart, neonate N10.CNhs11118.749-24G111.66
heart, neonate N16.CNhs11209.782-15G113.54
heart, neonate N20.CNhs11127.821-26I616.96
heart, neonate N25.CNhs11196.1351-25D322.61
heart, neonate N30.CNhs11202.1390-42D219.46
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I396.48
intestine, adult.CNhs10496.178-9A336.49
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D84.51
intestine, embryo E16.CNhs10585.463-22H48.67
intestine, embryo E17.CNhs10582.482-18D315.79
intestine, embryo E18.CNhs10526.1289-20F723.40
intestine, neonate N00.CNhs11126.644-26D146.03
intestine, neonate N01.CNhs11192.1322-23E926.02
intestine, neonate N06.CNhs11102.688-20B839.71
intestine, neonate N07.CNhs11095.720-20F245.96
intestine, neonate N10.CNhs11098.755-23A548.35
intestine, neonate N20.CNhs11187.827-18D138.65
intestine, neonate N25.CNhs11121.1352-25E338.26
intestine, neonate N30.CNhs11131.1384-42G130.27
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F81.83
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C74.27
kidney, neonate N00.CNhs11214.646-21G74.56
kidney, neonate N10.CNhs11206.758-6D57.65
kidney, neonate N20.CNhs11113.832-19I19.59
kidney, neonate N25.CNhs11122.1353-25F312.25
kidney, neonate N30.CNhs11203.1385-42H18.88
liver, adult pregnant day01.CNhs10466.508-5B215.42
liver, embryo E12.CNhs10601.355-15F823.86
liver, embryo E13.CNhs10524.378-3H631.25
liver, embryo E14.CNhs10594.409-16E137.33
liver, embryo E15.CNhs10520.433-16D734.69
liver, embryo E16.CNhs10523.462-17F527.49
liver, embryo E17.CNhs10510.481-18A324.70
liver, embryo E18.CNhs10579.499-43G458.40
liver, neonate N00.CNhs11117.641-24F444.26
liver, neonate N03.CNhs11123.1345-25G229.10
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H227.91
liver, neonate N10.CNhs11115.751-24B916.85
liver, neonate N20.CNhs11220.823-25A315.66
liver, neonate N25.CNhs11198.1368-26H111.84
liver, neonate N30.CNhs11106.1382-42D18.20
lung, adult.CNhs10474.28-22B139.72
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A64.69
lung, embryo E18.CNhs10583.1287-20I611.19
lung, neonate N00.CNhs11224.640-42C612.29
lung, neonate N06.CNhs11212.683-20E514.50
lung, neonate N07.CNhs11111.715-19A318.38
lung, neonate N10.CNhs11219.750-23E611.64
lung, neonate N20.CNhs11109.822-18A433.92
lung, neonate N25.CNhs11119.1359-25C737.47
lung, neonate N30.CNhs11133.1394-42H228.64
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A199.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1147.94
mammary gland, adult lactating day02.CNhs10480.595-22B612.79
mammary gland, adult pregnant day19.CNhs10476.588-5H215.18
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.58
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.06
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I713.20
ovary, embryo E18.CNhs11040.505-44H77.48
ovary, neonate N00.CNhs11217.1299-22I46.52
oviduct, adult pregnant day01.CNhs10500.988-6G623.26
pancreas, adult.CNhs10486.34-16E413.27
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E52.64
pancreas, embryo E17.CNhs10599.1558-45G34.43
pancreas, embryo E18.CNhs10580.1535-43I78.61
pancreas, neonate N00.CNhs11105.645-26G916.28
pancreas, neonate N01.CNhs11138.1531-43D712.36
pancreas, neonate N02.CNhs11139.1539-43D88.91
pancreas, neonate N16.CNhs11136.787-43B68.53
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H511.34
pituitary gland, adult.CNhs10493.21-1G823.15
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I718.07
placenta, adult pregnant day17.CNhs10464.577-18G39.11
prostate, adult.CNhs10470.859-1F812.13
skin, adult.CNhs10492.30-1C38.08
skin, neonate N00.CNhs11124.650-25G45.33
skin, neonate N03.CNhs11215.662-22H33.20
skin, neonate N06.CNhs11097.693-20I51.79
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I144.89
spinal cord, adult.CNhs10505.24-13C93.15
spleen, adult.CNhs10465.25-2G264.59
spleen, embryo E16.CNhs11035.461-43C110.94
spleen, embryo E18.CNhs11011.1271-21F244.82
spleen, neonate N10.CNhs11116.752-24D171.96
spleen, neonate N20.CNhs11112.824-19H177.92
spleen, neonate N25.CNhs11099.1354-25G376.64
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C628.90
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C932.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D329.99
stomach, adult.CNhs10503.33-1H614.32
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G83.86
stomach, embryo E16.CNhs11022.459-17D43.24
stomach, embryo E17.CNhs11006.1035-18D55.02
stomach, embryo E18.CNhs10999.1286-20C69.17
stomach, neonate N03.CNhs11193.1340-24B88.63
stomach, neonate N07.CNhs11210.718-18A913.39
stomach, neonate N25.CNhs11104.1355-25E415.71
stomach, neonate N30.CNhs11134.1386-42I117.89
submandibular gland, adult.CNhs10469.59-29C113.67
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G53.72
testis, neonate N00.CNhs11189.1300-22B73.99
testis, neonate N07.CNhs11222.726-26I42.99
testis, neonate N10.CNhs11204.763-44D91.78
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B546.14
thymus, embryo E14.CNhs11041.402-44I49.93
thymus, embryo E15.CNhs11005.430-45I222.39
thymus, embryo E16.CNhs11002.456-26C521.05
thymus, embryo E17.CNhs10581.478-18C119.16
thymus, embryo E18.CNhs10595.1273-19G423.44
thymus, neonate N02.CNhs11181.1541-43F829.21
thymus, neonate N03.CNhs11137.2104-43C724.81
thymus, neonate N06.CNhs11197.681-26C426.05
thymus, neonate N07.CNhs11211.713-19D329.49
thymus, neonate N10.CNhs11194.748-24E431.56
thymus, neonate N20.CNhs11186.820-7A229.92
thymus, neonate N25.CNhs11125.1362-25G735.21
thymus, neonate N30.CNhs11132.1393-42G246.28
tongue, adult.CNhs10499.32-1B46.80
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E415.84
uterus, adult pregnant day19.CNhs10497.590-15F525.71
uterus, adult.CNhs10509.92-27E536.81
vagina, adult.CNhs10502.89-27D511.15
vesicular gland, adult.CNhs10491.51-27F818.06
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H24.95
whole body, embryo E14.5.CNhs10578.420-27D27.54
whole body, embryo E14.CNhs10519.395-14B14.40
whole body, embryo E16.CNhs10514.453-14F23.68
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.42
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.47
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.37
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.89
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.35
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.34
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.41
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.84
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.89
whole body, embryo E17.5.CNhs10513.490-9F97.52
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B310.99
whole body, neonate N00.CNhs10525.657-19C213.54
whole body, neonate N01.CNhs10576.659-23C64.40
whole body, neonate N06.CNhs10515.692-21D19.71
whole body, neonate N10.CNhs10518.761-6B49.27





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure3.51e-16118
endoderm3.51e-16118
presumptive endoderm3.51e-16118
digestive system6.59e-16116
digestive tract6.59e-16116
primitive gut6.59e-16116
subdivision of digestive tract8.45e-15114
hemolymphoid system1.70e-1248
immune system1.70e-1248
hematopoietic system7.14e-1145
blood island7.14e-1145
gut epithelium3.72e-0955
organ component layer4.10e-0924
unilaminar epithelium4.61e-0966
gastrointestinal system6.03e-0947
endo-epithelium1.81e-0869
lateral plate mesoderm3.49e-0887
intestine4.72e-0831
foregut6.00e-0780
mucosa6.52e-0715
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