FFCP PHASE1:Mm9::chr7:148930629..148930659,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=171|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:148930629..148930659,+|id=chr7:148930629..148930659,+|ontology_enrichment_celltype=CL:0000239!4.03e-07!6;CL:0000677!4.03e-07!6;CL:0000212!4.03e-07!6;CL:0000584!4.03e-07!6;CL:0002563!4.40e-07!9;CL:0002251!4.40e-07!9|ontology_enrichment_celltype_v019_2=CL:0000239,5.24e-14,6;CL:0000677,5.24e-14,6;CL:0000584,5.24e-14,6;CL:0000075,6.32e-12,7;CL:0002563,3.80e-09,9;CL:0002251,3.80e-09,9;CL:0000682,7.20e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!9.12e-19!43;UBERON:0005409!4.06e-18!59;UBERON:0000344!3.11e-13!15;UBERON:0001242!3.57e-11!13;UBERON:0000060!3.57e-11!13;UBERON:0001262!3.57e-11!13;UBERON:0004786!3.57e-11!13;UBERON:0004923!1.62e-07!24;UBERON:0003350!4.40e-07!9;UBERON:0004808!4.40e-07!9;UBERON:0001277!4.40e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.69e-49,31;UBERON:0005409,2.25e-33,47;UBERON:0000344,5.41e-22,15;UBERON:0001242,1.38e-17,13;UBERON:0001262,1.38e-17,13;UBERON:0004786,1.38e-17,13;UBERON:0004923,8.16e-13,24;UBERON:0001007,2.39e-12,116;UBERON:0001555,2.39e-12,116;UBERON:0007026,2.39e-12,116;UBERON:0004119,4.91e-12,118;UBERON:0000925,4.91e-12,118;UBERON:0006595,4.91e-12,118;UBERON:0002108,4.08e-11,4;UBERON:0004921,2.21e-10,114;UBERON:0003350,3.80e-09,9;UBERON:0004808,3.80e-09,9;UBERON:0001277,3.80e-09,9;UBERON:0000331,1.60e-08,3;UBERON:0002116,1.60e-08,3;UBERON:0001204,1.60e-08,3;UBERON:0001168,1.60e-08,3;UBERON:0000485,2.24e-07,11;UBERON:0001155,6.71e-07,2;UBERON:0000059,6.71e-07,2|phase1_expression=0,1.04692622291808,1.36499771816861,2.11724947914781,2.00358291978539,11.9194283057442,26.3982283872944,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,19.0390983124154,11.6998733344257,2.29692785646008,3.01533397311352,6.89507944594845,43.5153630555096,8.56902441183765,6.65191531965914,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,2.66844398250329,0,0,0,0,0,0,0,0,0,0,6.05174562511018,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,141.657738525773,0,0,57.2223803667245,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0,0,0.258703370739016,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,30.7289468174932,31.9985185662889,0,0.232236671860439,0.257734922644187,2.42020229548011,5.11469500843202,8.56015317506516,49.8255514621737,19.2697777027093,24.3795152536261,24.4716460610616,17.5467678407208,82.6913855961884,167.723126702763,123.666730690962,0,0,1.1270773567308,0,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469380496577004,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0.492422699235184,59.7535715091194,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0.324016022465404,0.209088296014469,0.436725127492355,0.269728692769641,0.165306911450672,0,67.7886310316077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0.100826185136841,0,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.114870937911227,0,0.115884325944855,0.38581844092741,0.412085900803307,0.441596760403192,0.342869252385415,0.532427418478012,0,0.290692833264657,0.282328141245992,0.0846146078916765,0.548783918618318,0,0.543216455383447,0,0.237270036248348,0.394017929502254,0.409231043169689,0,0,0,0.701794825336225,0.644613162144895,2.48674831689496,0.441182838239031,0|short_description=p@chr7:148930629..148930659,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=171 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:148930629..148930659,+ | |||
|description=CAGE_peak_at_chr7:148930629..148930659,+ | |||
|id=chr7:148930629..148930659,+ | |||
|ontology_enrichment_celltype=CL:0000239!4.03e-07!6;CL:0000677!4.03e-07!6;CL:0000212!4.03e-07!6;CL:0000584!4.03e-07!6;CL:0002563!4.40e-07!9;CL:0002251!4.40e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.24e-14,6;CL:0000677,5.24e-14,6;CL:0000584,5.24e-14,6;CL:0000075,6.32e-12,7;CL:0002563,3.80e-09,9;CL:0002251,3.80e-09,9;CL:0000682,7.20e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!9.12e-19!43;UBERON:0005409!4.06e-18!59;UBERON:0000344!3.11e-13!15;UBERON:0001242!3.57e-11!13;UBERON:0000060!3.57e-11!13;UBERON:0001262!3.57e-11!13;UBERON:0004786!3.57e-11!13;UBERON:0004923!1.62e-07!24;UBERON:0003350!4.40e-07!9;UBERON:0004808!4.40e-07!9;UBERON:0001277!4.40e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.69e-49,31;UBERON:0005409,2.25e-33,47;UBERON:0000344,5.41e-22,15;UBERON:0001242,1.38e-17,13;UBERON:0001262,1.38e-17,13;UBERON:0004786,1.38e-17,13;UBERON:0004923,8.16e-13,24;UBERON:0001007,2.39e-12,116;UBERON:0001555,2.39e-12,116;UBERON:0007026,2.39e-12,116;UBERON:0004119,4.91e-12,118;UBERON:0000925,4.91e-12,118;UBERON:0006595,4.91e-12,118;UBERON:0002108,4.08e-11,4;UBERON:0004921,2.21e-10,114;UBERON:0003350,3.80e-09,9;UBERON:0004808,3.80e-09,9;UBERON:0001277,3.80e-09,9;UBERON:0000331,1.60e-08,3;UBERON:0002116,1.60e-08,3;UBERON:0001204,1.60e-08,3;UBERON:0001168,1.60e-08,3;UBERON:0000485,2.24e-07,11;UBERON:0001155,6.71e-07,2;UBERON:0000059,6.71e-07,2 | |||
|phase1_expression=0,1.04692622291808,1.36499771816861,2.11724947914781,2.00358291978539,11.9194283057442,26.3982283872944,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,19.0390983124154,11.6998733344257,2.29692785646008,3.01533397311352,6.89507944594845,43.5153630555096,8.56902441183765,6.65191531965914,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,2.66844398250329,0,0,0,0,0,0,0,0,0,0,6.05174562511018,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,141.657738525773,0,0,57.2223803667245,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0,0,0.258703370739016,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,30.7289468174932,31.9985185662889,0,0.232236671860439,0.257734922644187,2.42020229548011,5.11469500843202,8.56015317506516,49.8255514621737,19.2697777027093,24.3795152536261,24.4716460610616,17.5467678407208,82.6913855961884,167.723126702763,123.666730690962,0,0,1.1270773567308,0,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469380496577004,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0.492422699235184,59.7535715091194,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0.324016022465404,0.209088296014469,0.436725127492355,0.269728692769641,0.165306911450672,0,67.7886310316077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0.100826185136841,0,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.114870937911227,0,0.115884325944855,0.38581844092741,0.412085900803307,0.441596760403192,0.342869252385415,0.532427418478012,0,0.290692833264657,0.282328141245992,0.0846146078916765,0.548783918618318,0,0.543216455383447,0,0.237270036248348,0.394017929502254,0.409231043169689,0,0,0,0.701794825336225,0.644613162144895,2.48674831689496,0.441182838239031,0 | |||
|short_description=p@chr7:148930629..148930659,+ | |||
}} |
Latest revision as of 13:23, 4 August 2015
Short description: | p@chr7:148930629..148930659, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:148930629..148930659, + |
Coexpression cluster: | MCL_coexpression_mm9:171 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.24e-14 | 6 |
gut absorptive cell | 5.24e-14 | 6 |
enterocyte | 5.24e-14 | 6 |
columnar/cuboidal epithelial cell | 6.32e-12 | 7 |
intestinal epithelial cell | 3.80e-09 | 9 |
epithelial cell of alimentary canal | 3.80e-09 | 9 |
M cell of gut | 7.20e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.69e-49 | 31 |
gastrointestinal system | 2.25e-33 | 47 |
mucosa | 5.41e-22 | 15 |
intestinal mucosa | 1.38e-17 | 13 |
wall of intestine | 1.38e-17 | 13 |
gastrointestinal system mucosa | 1.38e-17 | 13 |
organ component layer | 8.16e-13 | 24 |
digestive system | 2.39e-12 | 116 |
digestive tract | 2.39e-12 | 116 |
primitive gut | 2.39e-12 | 116 |
endoderm-derived structure | 4.91e-12 | 118 |
endoderm | 4.91e-12 | 118 |
presumptive endoderm | 4.91e-12 | 118 |
small intestine | 4.08e-11 | 4 |
subdivision of digestive tract | 2.21e-10 | 114 |
epithelium of mucosa | 3.80e-09 | 9 |
gastrointestinal system epithelium | 3.80e-09 | 9 |
intestinal epithelium | 3.80e-09 | 9 |
ileal mucosa | 1.60e-08 | 3 |
ileum | 1.60e-08 | 3 |
mucosa of small intestine | 1.60e-08 | 3 |
wall of small intestine | 1.60e-08 | 3 |
simple columnar epithelium | 2.24e-07 | 11 |
colon | 6.71e-07 | 2 |
large intestine | 6.71e-07 | 2 |