FFCP PHASE1:Mm9::chr11:99294264..99294277,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=358 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:99294264..99294277,- | |||
|description=CAGE_peak_at_chr11:99294264..99294277,- | |description=CAGE_peak_at_chr11:99294264..99294277,- | ||
|id=chr11:99294264..99294277,- | |id=chr11:99294264..99294277,- | ||
|ontology_enrichment_celltype=CL:0000239!1.03e-12!6;CL:0000677!1.03e-12!6;CL:0000212!1.03e-12!6;CL:0000584!1.03e-12!6;CL:0000075!8.92e-11!7;CL:0002563!1.06e-10!9;CL:0002251!1.06e-10!9;CL:0002076!1.28e-09!15;CL:0000066!1.64e-09!25;CL:0000473!3.71e-07!3;CL:0000627!3.71e-07!3;CL:0000682!3.71e-07!3;CL:0000223!8.96e-07!20 | |ontology_enrichment_celltype=CL:0000239!1.03e-12!6;CL:0000677!1.03e-12!6;CL:0000212!1.03e-12!6;CL:0000584!1.03e-12!6;CL:0000075!8.92e-11!7;CL:0002563!1.06e-10!9;CL:0002251!1.06e-10!9;CL:0002076!1.28e-09!15;CL:0000066!1.64e-09!25;CL:0000473!3.71e-07!3;CL:0000627!3.71e-07!3;CL:0000682!3.71e-07!3;CL:0000223!8.96e-07!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.62e-21,6;CL:0000677,1.62e-21,6;CL:0000584,1.62e-21,6;CL:0000075,2.22e-18,7;CL:0002563,3.41e-14,9;CL:0002251,3.41e-14,9;CL:0000066,6.80e-13,25;CL:0000682,1.40e-11,3;CL:0002076,4.83e-11,15;CL:0000223,4.42e-08,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.26e-28!59;UBERON:0000160!5.66e-27!43;UBERON:0000344!1.51e-22!15;UBERON:0001242!1.94e-18!13;UBERON:0000060!1.94e-18!13;UBERON:0001262!1.94e-18!13;UBERON:0004786!1.94e-18!13;UBERON:0001007!6.78e-15!128;UBERON:0001555!6.78e-15!128;UBERON:0007026!6.78e-15!128;UBERON:0004119!1.58e-14!130;UBERON:0000925!1.58e-14!130;UBERON:0006595!1.58e-14!130;UBERON:0004921!7.46e-13!126;UBERON:0004185!7.46e-13!126;UBERON:0004923!7.73e-13!24;UBERON:0003350!1.06e-10!9;UBERON:0004808!1.06e-10!9;UBERON:0001277!1.06e-10!9;UBERON:0000485!1.53e-08!11;UBERON:0000331!1.11e-07!3;UBERON:0002116!1.11e-07!3;UBERON:0001204!1.11e-07!3;UBERON:0001168!1.11e-07!3 | |ontology_enrichment_uberon=UBERON:0005409!1.26e-28!59;UBERON:0000160!5.66e-27!43;UBERON:0000344!1.51e-22!15;UBERON:0001242!1.94e-18!13;UBERON:0000060!1.94e-18!13;UBERON:0001262!1.94e-18!13;UBERON:0004786!1.94e-18!13;UBERON:0001007!6.78e-15!128;UBERON:0001555!6.78e-15!128;UBERON:0007026!6.78e-15!128;UBERON:0004119!1.58e-14!130;UBERON:0000925!1.58e-14!130;UBERON:0006595!1.58e-14!130;UBERON:0004921!7.46e-13!126;UBERON:0004185!7.46e-13!126;UBERON:0004923!7.73e-13!24;UBERON:0003350!1.06e-10!9;UBERON:0004808!1.06e-10!9;UBERON:0001277!1.06e-10!9;UBERON:0000485!1.53e-08!11;UBERON:0000331!1.11e-07!3;UBERON:0002116!1.11e-07!3;UBERON:0001204!1.11e-07!3;UBERON:0001168!1.11e-07!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.17e-34,15;UBERON:0000160,3.11e-32,31;UBERON:0001242,1.79e-27,13;UBERON:0001262,1.79e-27,13;UBERON:0004786,1.79e-27,13;UBERON:0005409,9.01e-23,47;UBERON:0004923,7.28e-21,24;UBERON:0002108,8.70e-16,4;UBERON:0003350,3.41e-14,9;UBERON:0004808,3.41e-14,9;UBERON:0001277,3.41e-14,9;UBERON:0000331,1.64e-12,3;UBERON:0002116,1.64e-12,3;UBERON:0001204,1.64e-12,3;UBERON:0001168,1.64e-12,3;UBERON:0000485,1.60e-11,11;UBERON:0001007,8.67e-11,116;UBERON:0001555,8.67e-11,116;UBERON:0007026,8.67e-11,116;UBERON:0004119,1.53e-10,118;UBERON:0000925,1.53e-10,118;UBERON:0006595,1.53e-10,118;UBERON:0001962,4.01e-09,2;UBERON:0001961,4.01e-09,2;UBERON:0001744,4.01e-09,2;UBERON:0004921,1.82e-08,114 | |||
|phase1_expression=0,5.23463111459042,3.63999391511629,3.93203474698879,1.50268718983904,1.6787927191189,4.90586545250604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.39969691173627,8.71755268055246,2.29692785646008,3.4460959692726,5.17130958446134,12.9215925230334,5.29263272495855,4.21287970245079,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,1.01343946190039,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,5.61711931072457,2.3800550999719,0,0,0.128867461322093,0,0.22237804384487,0.380451252225118,7.11793592316767,0.164698954724011,0.754005626400808,0.198956472041151,0,4.49409704327111,10.8069024937347,4.38110801159608,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614870295887855,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0.209088296014469,0.218362563746178,0.539457385539283,0.165306911450672,0,1.8146096260851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,5.23463111459042,3.63999391511629,3.93203474698879,1.50268718983904,1.6787927191189,4.90586545250604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.39969691173627,8.71755268055246,2.29692785646008,3.4460959692726,5.17130958446134,12.9215925230334,5.29263272495855,4.21287970245079,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,1.01343946190039,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,5.61711931072457,2.3800550999719,0,0,0.128867461322093,0,0.22237804384487,0.380451252225118,7.11793592316767,0.164698954724011,0.754005626400808,0.198956472041151,0,4.49409704327111,10.8069024937347,4.38110801159608,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614870295887855,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0.209088296014469,0.218362563746178,0.539457385539283,0.165306911450672,0,1.8146096260851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:99294264..99294277,- | |short_description=p@chr11:99294264..99294277,- | ||
}} | }} |
Latest revision as of 13:25, 4 August 2015
Short description: | p@chr11:99294264..99294277, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:99294264..99294277, - |
Coexpression cluster: | MCL_coexpression_mm9:358 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.62e-21 | 6 |
gut absorptive cell | 1.62e-21 | 6 |
enterocyte | 1.62e-21 | 6 |
columnar/cuboidal epithelial cell | 2.22e-18 | 7 |
intestinal epithelial cell | 3.41e-14 | 9 |
epithelial cell of alimentary canal | 3.41e-14 | 9 |
epithelial cell | 6.80e-13 | 25 |
M cell of gut | 1.40e-11 | 3 |
endo-epithelial cell | 4.83e-11 | 15 |
endodermal cell | 4.42e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.17e-34 | 15 |
intestine | 3.11e-32 | 31 |
intestinal mucosa | 1.79e-27 | 13 |
wall of intestine | 1.79e-27 | 13 |
gastrointestinal system mucosa | 1.79e-27 | 13 |
gastrointestinal system | 9.01e-23 | 47 |
organ component layer | 7.28e-21 | 24 |
small intestine | 8.70e-16 | 4 |
epithelium of mucosa | 3.41e-14 | 9 |
gastrointestinal system epithelium | 3.41e-14 | 9 |
intestinal epithelium | 3.41e-14 | 9 |
ileal mucosa | 1.64e-12 | 3 |
ileum | 1.64e-12 | 3 |
mucosa of small intestine | 1.64e-12 | 3 |
wall of small intestine | 1.64e-12 | 3 |
simple columnar epithelium | 1.60e-11 | 11 |
digestive system | 8.67e-11 | 116 |
digestive tract | 8.67e-11 | 116 |
primitive gut | 8.67e-11 | 116 |
endoderm-derived structure | 1.53e-10 | 118 |
endoderm | 1.53e-10 | 118 |
presumptive endoderm | 1.53e-10 | 118 |
gut-associated lymphoid tissue | 4.01e-09 | 2 |
mucosa-associated lymphoid tissue | 4.01e-09 | 2 |
lymphoid tissue | 4.01e-09 | 2 |
subdivision of digestive tract | 1.82e-08 | 114 |