FFCP PHASE1:Mm9::chr11:99299457..99299473,-: Difference between revisions
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{{FFCP|EntrezGene=66809|HGNC=|MCL_coexpression_id=12|UniProt=Q9D312|association_with_transcript=0bp_to_ENSMUST00000017743,NM_023256,uc007liu.1_5end|description=CAGE_peak_1_at_Krt20_5end|id=chr11:99299457..99299473,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,2.38e-07,9;CL:0002251,2.38e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!8.73e-26!59;UBERON:0000160!8.76e-23!43;UBERON:0004119!2.36e-18!130;UBERON:0000925!2.36e-18!130;UBERON:0006595!2.36e-18!130;UBERON:0001007!7.06e-18!128;UBERON:0001555!7.06e-18!128;UBERON:0007026!7.06e-18!128;UBERON:0004921!1.14e-16!126;UBERON:0004185!1.14e-16!126;UBERON:0000344!2.49e-10!15;UBERON:0001242!5.38e-09!13;UBERON:0000060!5.38e-09!13;UBERON:0001262!5.38e-09!13;UBERON:0004786!5.38e-09!13;UBERON:0004923!8.10e-09!24;UBERON:0002108!1.21e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.12e-23,31;UBERON:0005409,5.00e-23,47;UBERON:0004119,2.50e-14,118;UBERON:0000925,2.50e-14,118;UBERON:0006595,2.50e-14,118;UBERON:0001007,7.69e-14,116;UBERON:0001555,7.69e-14,116;UBERON:0007026,7.69e-14,116;UBERON:0000344,1.23e-12,15;UBERON:0004921,1.27e-12,114;UBERON:0001242,5.95e-11,13;UBERON:0001262,5.95e-11,13;UBERON:0004786,5.95e-11,13;UBERON:0004923,5.43e-08,24;UBERON:0003350,2.38e-07,9;UBERON:0004808,2.38e-07,9;UBERON:0001277,2.38e-07,9|phase1_expression=0,2650.11924561331,2360.9910531923,1576.14100511989,1543.2597439647,600.336276356918,604.122288580029,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1342.49641965948,1519.37766850787,2231.46541255097,1786.36999807168,1601.16673008884,2055.67335167905,1771.51978208255,1675.83919953279,0,0,0,2.88851619751275,16.4572298904907,7.14592746918292,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,2.05807548828758,0,2.57836046138721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.226714680320357,0,0,0,0,0,0,77.1039866523318,0,0,0,0,0,0,0,49.7929394325792,48.1383744402687,58.1353111767001,279.750505311697,0,0,1.56136794089522,3.34912026143355,2.30615497256059,0.753613202763113,0.823120949949934,1.88499886994513,6.92145909656247,0,0,0,0,0,879.769112949537,0,0,1705.43130057256,0,0,0,0,0,0,0,0,0.41557608911912,0,0.203678727700633,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0.540186389416048,2.26057226753573,0.204109497453984,0.12811372028485,0.187403449119458,0,0,0.945530400839096,0,0,0,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,2.07125772535502,3.51789089971644,0.36012412292203,0.23674473558521,0.196764231747404,0.308534225774757,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0,0.134206418760372,0,0,3809.39814902021,1028.18380318786,3.19932375802851,7.43157349953403,19.7167215822803,47.5973118111088,57.1511572681317,72.0955122966599,1162.12167172251,215.59093173373,99.2774074761064,74.0118075993081,101.576289389062,1063.30336043794,1364.47950885894,1310.15043674048,0,1.37098215131675,0,1.22190796707189,0.969762435838129,2.24434623649019,0.632365371242573,0.738050739898011,0.156998727841375,0.863780147452604,0.296452627087149,18.0192714173382,18.4765455406411,24.5099702499491,29.4147176013329,42.2060029566729,37.4300002118687,22.4402987211632,8.2688965655268,47.7736858947262,54.6319184803947,26.0498663367952,27.4593152340813,2.02063102357689,0.179397413521912,0,0,0.37898282354097,0.814824882210129,0.169745085775188,0,0.167506257441816,0.952174563544055,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0.827810238914197,0,0.117211686592203,0,0.252470927204373,0.315508219416257,0.390438744296638,0,0.238968797952552,0,0,0,0,0.395287777946524,0,0.141940085208269,0.890328018336276,1.62886959353576,0.989820737835213,1.32745138339963,2.6705869977048,0.906970670894253,3.77210159511796,7.38254732201932,50.1119291148602,94.3263270064007,166.13491437122,152.580877948661,22.1225730555071,8.4334886859999,8.25084345985495,0,0.540183282093931,0.129358683782755,0.214337035031592,0,0,0,0,3.75474732901937,1.90648863777438,0,0.49465875882444,0.484393280087717,0.241251699712623,0.358117032009409,0.984845398470368,948.478642393534,0.18542530201051,0.341741761595705,0.412773735926445,0.740778109478847,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,320.769327653078,1.10717597753397,2.23651413839534,9.93649135560572,17.9815934572443,60.7047927214374,93.3261276982959,118.277095142956,155.22127359653,704.457379840894,0,0,0.149516546043979,0,0,0.129159823477731,0,0,0.911430693907651,0.314578033277133,0.724752362478018,0.576060012515731,1.26404448251271,0,0.308132871494482,0.51968329191118,0.179026695667481,0.993406773906324,0.841368146639782,1.18151621739662,0.605798699688886,0.838274873204998,1.20991422164209,2.53390489923356,2.11666051608725,2.22066114144981,0,0.443971906748129,0.448569283047378,0,56.9909302394962,0.93841237725591,1.28206136987086,12.4333659865858,0,0,0,0,0,0,0,0,0,0,0,1.03787347584177,2.79317411380722,4.26834014385335,7.77941494618541,14.2536950587028,9.74370594785075,6.44515510624684,5.76898160268904,5.13470735346904,4.80124702351215,5.57654459758527,7.73367999682912,4.96299989590377,4.22566005872137,5.28406314391642,7.1444053692461,4.51948871184936,5.78727661391115,5.76920261124629,5.88795680537589,4.4573002810104,6.38912902173615,5.96090474868302,4.79643174886684,6.58765662907314,5.49994951295897,6.95126296916536,4.20911538300549,5.97538100921792,5.05028044491965,4.27086065247027,3.74317033027141,4.91077251803627,3.56354734727722,3.85813221962283,0,7.25187986180766,8.37997110788363,0.382576664137687,0.220591419119515,0|short_description=p1@Krt20}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:66809 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9D312 | |||
|association_with_transcript=0bp_to_ENSMUST00000017743,NM_023256,uc007liu.1_5end | |||
|cluster_id=chr11:99299457..99299473,- | |||
|description=CAGE_peak_1_at_Krt20_5end | |||
|id=chr11:99299457..99299473,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.38e-07,9;CL:0002251,2.38e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!8.73e-26!59;UBERON:0000160!8.76e-23!43;UBERON:0004119!2.36e-18!130;UBERON:0000925!2.36e-18!130;UBERON:0006595!2.36e-18!130;UBERON:0001007!7.06e-18!128;UBERON:0001555!7.06e-18!128;UBERON:0007026!7.06e-18!128;UBERON:0004921!1.14e-16!126;UBERON:0004185!1.14e-16!126;UBERON:0000344!2.49e-10!15;UBERON:0001242!5.38e-09!13;UBERON:0000060!5.38e-09!13;UBERON:0001262!5.38e-09!13;UBERON:0004786!5.38e-09!13;UBERON:0004923!8.10e-09!24;UBERON:0002108!1.21e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.12e-23,31;UBERON:0005409,5.00e-23,47;UBERON:0004119,2.50e-14,118;UBERON:0000925,2.50e-14,118;UBERON:0006595,2.50e-14,118;UBERON:0001007,7.69e-14,116;UBERON:0001555,7.69e-14,116;UBERON:0007026,7.69e-14,116;UBERON:0000344,1.23e-12,15;UBERON:0004921,1.27e-12,114;UBERON:0001242,5.95e-11,13;UBERON:0001262,5.95e-11,13;UBERON:0004786,5.95e-11,13;UBERON:0004923,5.43e-08,24;UBERON:0003350,2.38e-07,9;UBERON:0004808,2.38e-07,9;UBERON:0001277,2.38e-07,9 | |||
|phase1_expression=0,2650.11924561331,2360.9910531923,1576.14100511989,1543.2597439647,600.336276356918,604.122288580029,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1342.49641965948,1519.37766850787,2231.46541255097,1786.36999807168,1601.16673008884,2055.67335167905,1771.51978208255,1675.83919953279,0,0,0,2.88851619751275,16.4572298904907,7.14592746918292,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,2.05807548828758,0,2.57836046138721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.226714680320357,0,0,0,0,0,0,77.1039866523318,0,0,0,0,0,0,0,49.7929394325792,48.1383744402687,58.1353111767001,279.750505311697,0,0,1.56136794089522,3.34912026143355,2.30615497256059,0.753613202763113,0.823120949949934,1.88499886994513,6.92145909656247,0,0,0,0,0,879.769112949537,0,0,1705.43130057256,0,0,0,0,0,0,0,0,0.41557608911912,0,0.203678727700633,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0.540186389416048,2.26057226753573,0.204109497453984,0.12811372028485,0.187403449119458,0,0,0.945530400839096,0,0,0,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,2.07125772535502,3.51789089971644,0.36012412292203,0.23674473558521,0.196764231747404,0.308534225774757,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0,0.134206418760372,0,0,3809.39814902021,1028.18380318786,3.19932375802851,7.43157349953403,19.7167215822803,47.5973118111088,57.1511572681317,72.0955122966599,1162.12167172251,215.59093173373,99.2774074761064,74.0118075993081,101.576289389062,1063.30336043794,1364.47950885894,1310.15043674048,0,1.37098215131675,0,1.22190796707189,0.969762435838129,2.24434623649019,0.632365371242573,0.738050739898011,0.156998727841375,0.863780147452604,0.296452627087149,18.0192714173382,18.4765455406411,24.5099702499491,29.4147176013329,42.2060029566729,37.4300002118687,22.4402987211632,8.2688965655268,47.7736858947262,54.6319184803947,26.0498663367952,27.4593152340813,2.02063102357689,0.179397413521912,0,0,0.37898282354097,0.814824882210129,0.169745085775188,0,0.167506257441816,0.952174563544055,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0.827810238914197,0,0.117211686592203,0,0.252470927204373,0.315508219416257,0.390438744296638,0,0.238968797952552,0,0,0,0,0.395287777946524,0,0.141940085208269,0.890328018336276,1.62886959353576,0.989820737835213,1.32745138339963,2.6705869977048,0.906970670894253,3.77210159511796,7.38254732201932,50.1119291148602,94.3263270064007,166.13491437122,152.580877948661,22.1225730555071,8.4334886859999,8.25084345985495,0,0.540183282093931,0.129358683782755,0.214337035031592,0,0,0,0,3.75474732901937,1.90648863777438,0,0.49465875882444,0.484393280087717,0.241251699712623,0.358117032009409,0.984845398470368,948.478642393534,0.18542530201051,0.341741761595705,0.412773735926445,0.740778109478847,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,320.769327653078,1.10717597753397,2.23651413839534,9.93649135560572,17.9815934572443,60.7047927214374,93.3261276982959,118.277095142956,155.22127359653,704.457379840894,0,0,0.149516546043979,0,0,0.129159823477731,0,0,0.911430693907651,0.314578033277133,0.724752362478018,0.576060012515731,1.26404448251271,0,0.308132871494482,0.51968329191118,0.179026695667481,0.993406773906324,0.841368146639782,1.18151621739662,0.605798699688886,0.838274873204998,1.20991422164209,2.53390489923356,2.11666051608725,2.22066114144981,0,0.443971906748129,0.448569283047378,0,56.9909302394962,0.93841237725591,1.28206136987086,12.4333659865858,0,0,0,0,0,0,0,0,0,0,0,1.03787347584177,2.79317411380722,4.26834014385335,7.77941494618541,14.2536950587028,9.74370594785075,6.44515510624684,5.76898160268904,5.13470735346904,4.80124702351215,5.57654459758527,7.73367999682912,4.96299989590377,4.22566005872137,5.28406314391642,7.1444053692461,4.51948871184936,5.78727661391115,5.76920261124629,5.88795680537589,4.4573002810104,6.38912902173615,5.96090474868302,4.79643174886684,6.58765662907314,5.49994951295897,6.95126296916536,4.20911538300549,5.97538100921792,5.05028044491965,4.27086065247027,3.74317033027141,4.91077251803627,3.56354734727722,3.85813221962283,0,7.25187986180766,8.37997110788363,0.382576664137687,0.220591419119515,0 | |||
|short_description=p1@Krt20 | |||
}} |
Revision as of 13:25, 4 August 2015
Short description: | p1@Krt20 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Krt20_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000017743, NM_023256, uc007liu.1_5end |
EntrezGene: | 66809 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.38e-07 | 9 |
epithelial cell of alimentary canal | 2.38e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.12e-23 | 31 |
gastrointestinal system | 5.00e-23 | 47 |
endoderm-derived structure | 2.50e-14 | 118 |
endoderm | 2.50e-14 | 118 |
presumptive endoderm | 2.50e-14 | 118 |
digestive system | 7.69e-14 | 116 |
digestive tract | 7.69e-14 | 116 |
primitive gut | 7.69e-14 | 116 |
mucosa | 1.23e-12 | 15 |
subdivision of digestive tract | 1.27e-12 | 114 |
intestinal mucosa | 5.95e-11 | 13 |
wall of intestine | 5.95e-11 | 13 |
gastrointestinal system mucosa | 5.95e-11 | 13 |
organ component layer | 5.43e-08 | 24 |
epithelium of mucosa | 2.38e-07 | 9 |
gastrointestinal system epithelium | 2.38e-07 | 9 |
intestinal epithelium | 2.38e-07 | 9 |