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FFCP PHASE1:Mm9::chr12:101437729..101437748,+: Difference between revisions

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{{FFCP|EntrezGene=12313,12314,12315|HGNC=|MCL_coexpression_id=240|UniProt=|association_with_transcript=0bp_to_ENSMUST00000153524_5end|description=CAGE_peak_1_at_Calm1_5end,CAGE_peak_1_at_Calm2_5end,CAGE_peak_1_at_Calm3_5end|id=chr12:101437729..101437748,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.44e-09!51;UBERON:0002020!6.37e-09!34;UBERON:0000160!1.99e-08!43;UBERON:0002021!3.95e-08!10;UBERON:0000411!3.95e-08!10;UBERON:0001950!3.95e-08!10;UBERON:0000073!5.15e-08!75;UBERON:0001016!5.15e-08!75;UBERON:0001049!6.51e-08!52;UBERON:0005068!6.51e-08!52;UBERON:0006241!6.51e-08!52;UBERON:0007135!6.51e-08!52;UBERON:0000955!1.73e-07!50;UBERON:0006238!1.73e-07!50;UBERON:0001017!1.74e-07!73;UBERON:0005743!1.74e-07!73;UBERON:0005409!2.12e-07!59;UBERON:0002791!3.51e-07!29;UBERON:0003528!3.51e-07!29;UBERON:0001893!3.51e-07!29;UBERON:0002616!3.95e-07!49;UBERON:0000064!4.96e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.90e-11,31;UBERON:0007023,3.44e-09,51;UBERON:0002020,6.37e-09,34;UBERON:0000073,9.67e-09,54;UBERON:0005409,9.74e-09,47;UBERON:0002021,3.95e-08,10;UBERON:0000411,3.95e-08,10;UBERON:0001950,3.95e-08,10;UBERON:0001016,5.15e-08,75;UBERON:0011216,5.71e-08,194;UBERON:0001049,6.51e-08,52;UBERON:0005068,6.51e-08,52;UBERON:0006241,6.51e-08,52;UBERON:0007135,6.51e-08,52;UBERON:0001017,1.74e-07,73;UBERON:0003528,3.51e-07,29;UBERON:0002791,3.51e-07,29;UBERON:0001893,3.51e-07,29|phase1_expression=743.250799413349,2166.43933062515,2141.68141980655,1512.62352074546,1805.72910645658,735.143331702165,951.737897786172,468.846787416363,955.955423409817,929.93836307728,379.076581651268,368.62714671745,568.557624101534,540.432927754242,290.138602541442,289.337157100061,234.353229172929,616.570802192676,618.248981128276,534.30657161372,775.424719597454,352.18500390954,413.479266206935,1573.84546301874,1605.17673962699,2317.02597520411,1956.52098655452,1566.90680409179,3452.91555494177,2747.63247464276,1637.03636016811,86.9992022639695,96.5651716507775,142.633512913895,471.694695053831,638.174803531252,541.457132807803,1310.841067468,1176.69102885284,1166.41090157362,1138.22792934001,1116.77936790706,1154.54361950808,263.376143204908,252.327181805372,278.440423029271,85.2806565339363,216.498980285783,270.873063311604,342.585482168887,288.232042126621,202.69111575461,509.891339809461,691.995483478823,705.460884400032,899.121728945635,862.752187655596,734.317059403078,544.231279712318,612.571553997014,541.292018594277,224.992769293904,293.467282716676,202.027486529674,231.394728840672,261.456682300165,106.657639344552,174.435110615986,450.635055092644,414.738242554954,472.600188156555,1126.89313347301,1279.71232627365,509.194252336564,456.991205814951,443.98267393264,1718.90890240046,1968.55569125934,1824.69200855092,516.598589039169,708.205849126253,657.392673642631,1593.01819230188,1206.56303590792,1377.47620370794,1391.53080919213,1446.63864859968,896.954133311346,840.636472191676,1211.78996631231,546.104696713961,492.162457633353,326.38624017972,392.364220320693,320.989550219149,297.041826145533,729.187429324056,979.633494178676,925.877320404624,907.376027342554,553.937169981684,346.481489018658,229.324715735981,263.094680166733,1240.27717395325,1234.11590472921,1183.93825022462,807.508397373192,752.991365645975,408.067440289203,396.41397166062,384.539899108234,380.746185969753,364.296622215689,267.631897440864,330.251802014387,620.212174045544,470.960105488152,633.38115519611,432.241023059477,448.529123993059,381.111948964285,2492.05784748629,1359.0884597276,1301.08294272518,2314.44092018984,222.616501332,329.346599315381,295.692418399022,1792.54458175751,2176.78786821102,849.423420282963,2945.45310565812,2720.55675053739,1796.3276452174,1756.91063776075,279.752732496819,370.981586359297,611.841798167927,618.90949816212,278.978229712037,386.235535448234,474.463712037095,405.848074431581,309.770180635996,437.892695933617,415.473446697838,653.484714486754,398.800786925758,323.182291006803,359.11624441862,427.650873966199,413.456259598464,528.298536614127,581.951881761664,254.365792994034,405.87922226705,385.764512764958,420.561979105477,376.554654469542,330.447218513365,324.291772691288,370.032021719684,294.752819157611,308.071424436094,289.969829103759,316.294340250151,192.312518878728,317.600510333017,429.297918566834,377.375308435958,361.991168865123,436.246079083318,308.808969567615,2355.45771386679,1043.76148336308,2798.31667308979,2215.56684750717,382.63912146021,398.518128912513,661.476678966305,935.811554252309,1018.71381885335,1167.03421620055,1998.71640722548,1205.92574648921,1009.86486895948,1084.9096420404,1035.45426668965,1832.69277424596,1717.86522040407,1598.30785913955,502.050933822807,353.484898014501,408.002003136551,340.097717501675,313.427219262883,243.020615919954,337.240452483664,321.937732743512,355.759117288555,306.518555181753,338.548900133524,335.692352700781,342.9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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:12313,entrezgene:12314,entrezgene:12315
|HGNC=
|MCL_coexpression_id=240
|TSSclassifier=NA
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000153524_5end
|cluster_id=chr12:101437729..101437748,+
|description=CAGE_peak_1_at_Calm1_5end,CAGE_peak_1_at_Calm2_5end,CAGE_peak_1_at_Calm3_5end
|id=chr12:101437729..101437748,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007023!3.44e-09!51;UBERON:0002020!6.37e-09!34;UBERON:0000160!1.99e-08!43;UBERON:0002021!3.95e-08!10;UBERON:0000411!3.95e-08!10;UBERON:0001950!3.95e-08!10;UBERON:0000073!5.15e-08!75;UBERON:0001016!5.15e-08!75;UBERON:0001049!6.51e-08!52;UBERON:0005068!6.51e-08!52;UBERON:0006241!6.51e-08!52;UBERON:0007135!6.51e-08!52;UBERON:0000955!1.73e-07!50;UBERON:0006238!1.73e-07!50;UBERON:0001017!1.74e-07!73;UBERON:0005743!1.74e-07!73;UBERON:0005409!2.12e-07!59;UBERON:0002791!3.51e-07!29;UBERON:0003528!3.51e-07!29;UBERON:0001893!3.51e-07!29;UBERON:0002616!3.95e-07!49;UBERON:0000064!4.96e-07!99
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.90e-11,31;UBERON:0007023,3.44e-09,51;UBERON:0002020,6.37e-09,34;UBERON:0000073,9.67e-09,54;UBERON:0005409,9.74e-09,47;UBERON:0002021,3.95e-08,10;UBERON:0000411,3.95e-08,10;UBERON:0001950,3.95e-08,10;UBERON:0001016,5.15e-08,75;UBERON:0011216,5.71e-08,194;UBERON:0001049,6.51e-08,52;UBERON:0005068,6.51e-08,52;UBERON:0006241,6.51e-08,52;UBERON:0007135,6.51e-08,52;UBERON:0001017,1.74e-07,73;UBERON:0003528,3.51e-07,29;UBERON:0002791,3.51e-07,29;UBERON:0001893,3.51e-07,29
|phase1_expression=743.250799413349,2166.43933062515,2141.68141980655,1512.62352074546,1805.72910645658,735.143331702165,951.737897786172,468.846787416363,955.955423409817,929.93836307728,379.076581651268,368.62714671745,568.557624101534,540.432927754242,290.138602541442,289.337157100061,234.353229172929,616.570802192676,618.248981128276,534.30657161372,775.424719597454,352.18500390954,413.479266206935,1573.84546301874,1605.17673962699,2317.02597520411,1956.52098655452,1566.90680409179,3452.91555494177,2747.63247464276,1637.03636016811,86.9992022639695,96.5651716507775,142.633512913895,471.694695053831,638.174803531252,541.457132807803,1310.841067468,1176.69102885284,1166.41090157362,1138.22792934001,1116.77936790706,1154.54361950808,263.376143204908,252.327181805372,278.440423029271,85.2806565339363,216.498980285783,270.873063311604,342.585482168887,288.232042126621,202.69111575461,509.891339809461,691.995483478823,705.460884400032,899.121728945635,862.752187655596,734.317059403078,544.231279712318,612.571553997014,541.292018594277,224.992769293904,293.467282716676,202.027486529674,231.394728840672,261.456682300165,106.657639344552,174.435110615986,450.635055092644,414.738242554954,472.600188156555,1126.89313347301,1279.71232627365,509.194252336564,456.991205814951,443.98267393264,1718.90890240046,1968.55569125934,1824.69200855092,516.598589039169,708.205849126253,657.392673642631,1593.01819230188,1206.56303590792,1377.47620370794,1391.53080919213,1446.63864859968,896.954133311346,840.636472191676,1211.78996631231,546.104696713961,492.162457633353,326.38624017972,392.364220320693,320.989550219149,297.041826145533,729.187429324056,979.633494178676,925.877320404624,907.376027342554,553.937169981684,346.481489018658,229.324715735981,263.094680166733,1240.27717395325,1234.11590472921,1183.93825022462,807.508397373192,752.991365645975,408.067440289203,396.41397166062,384.539899108234,380.746185969753,364.296622215689,267.631897440864,330.251802014387,620.212174045544,470.960105488152,633.38115519611,432.241023059477,448.529123993059,381.111948964285,2492.05784748629,1359.0884597276,1301.08294272518,2314.44092018984,222.616501332,329.346599315381,295.692418399022,1792.54458175751,2176.78786821102,849.423420282963,2945.45310565812,2720.55675053739,1796.3276452174,1756.91063776075,279.752732496819,370.981586359297,611.841798167927,618.90949816212,278.978229712037,386.235535448234,474.463712037095,405.848074431581,309.770180635996,437.892695933617,415.473446697838,653.484714486754,398.800786925758,323.182291006803,359.11624441862,427.650873966199,413.456259598464,528.298536614127,581.951881761664,254.365792994034,405.87922226705,385.764512764958,420.561979105477,376.554654469542,330.447218513365,324.291772691288,370.032021719684,294.752819157611,308.071424436094,289.969829103759,316.294340250151,192.312518878728,317.600510333017,429.297918566834,377.375308435958,361.991168865123,436.246079083318,308.808969567615,2355.45771386679,1043.76148336308,2798.31667308979,2215.56684750717,382.63912146021,398.518128912513,661.476678966305,935.811554252309,1018.71381885335,1167.03421620055,1998.71640722548,1205.92574648921,1009.86486895948,1084.9096420404,1035.45426668965,1832.69277424596,1717.86522040407,1598.30785913955,502.050933822807,353.484898014501,408.002003136551,340.097717501675,313.427219262883,243.020615919954,337.240452483664,321.937732743512,355.759117288555,306.518555181753,338.548900133524,335.692352700781,342.995446472539,339.316927588744,327.010515678267,321.489153949972,276.014423331059,315.314966646088,165.540066537311,360.499135515951,332.104557078189,378.467343778868,309.853409402759,354.368165759798,360.050608938478,258.107283929401,940.208984757851,397.931964718018,535.502912588497,490.393552804518,527.114297655976,531.497354862881,696.27764959159,580.522602376951,602.16625048565,582.673598465927,565.586064428107,574.832508022809,732.529693075129,593.35043830136,634.831305384336,1356.50077544386,437.670202986942,323.397866669146,1774.72622172505,1479.79754322657,501.96880274338,781.397519697534,533.52439903289,531.777569732022,567.640653025925,399.555830176667,493.053465744338,507.556219704377,483.343977799824,563.469294053009,626.926415823186,1469.40237999692,432.775319800011,300.752804593994,260.619134965722,546.54601740801,459.298178656271,456.427595971365,470.717778194117,579.960620249387,507.623953862048,577.67064298664,531.328570753863,465.323173731207,453.108167926981,451.616527090281,483.871413359244,384.695576315737,522.234355226311,320.688808469764,295.196516392246,402.739288824362,464.631412142757,458.942967690128,475.217571498925,357.746315209654,686.649417794417,770.433241731714,539.412461642437,544.619293465709,403.338137886372,511.755168015402,485.487323060756,488.811599440792,1594.40017636528,2062.4856342629,411.286210080431,512.664980020645,465.949430862195,287.827002303168,282.000191788475,366.960189823262,267.206091950341,290.679166476238,303.901742395928,960.398641723204,408.389767713246,502.60572273757,528.686143322717,583.565434176382,645.698100997447,648.562641764603,605.35390973236,779.247439286456,1242.48913397513,551.74931002119,1084.54521402838,278.997874918064,287.070480943064,293.621294399512,315.795768403053,317.299603671681,171.224211184155,264.575310002907,277.143247317154,582.459315311501,674.854304662179,484.445047922997,389.840589002986,338.227181943776,375.081415936894,401.198824990826,389.415455371279,284.021847215686,421.06284197472,326.929364932102,323.116860217199,364.587485454815,375.017925086567,351.173221987203,285.29651822521,450.966733010655,505.462015832745,480.86627142679,666.334042349027,522.384662263043,657.827076456393,440.296504738505,438.168966837611,491.540661954656,3394.15857412857,3675.69701350981,3570.85773526776,2889.02384837973,3068.48460605271,3243.66139539137,3053.12676854846,2889.2608398866,3222.29567028668,3077.04953274107,422.829654057936,437.730286120931,416.589998040087,458.742375107871,537.867375303403,545.096002554292,493.387735719586,472.026316134307,529.837615036087,514.238825939328,544.727015464125,488.353597848551,482.253763469894,492.353421993445,495.093742397386,426.759147389634,477.211654240915,459.895581585473,450.821975478817,437.327991719294,442.301335577186,460.72719278964,464.235261827434,496.503359216034,493.98013780007,473.672574977605,479.088360953791,471.94706231949,441.770782340588,372.037326109081,427.560605319524,435.980838994244,473.480316947331,496.262702318649,512.552865376893,580.559783127786,535.001588514649,473.360932068401,379.324762492516,493.242413151237,621.173931627109
|short_description=p1@Calm1,p1@Calm2,p1@Calm3
}}

Revision as of 14:02, 4 August 2015

Short description:p1@Calm1, p1@Calm2, p1@Calm3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Calm1_5end, CAGE_peak_1_at_Calm2_5end, CAGE_peak_1_at_Calm3_5end
Coexpression cluster:MCL_coexpression_mm9:240
Association with transcript: 0bp_to_ENSMUST00000153524_5end
EntrezGene:12313,12314,12315
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Calm1p1@Calm2p1@Calm3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7743.25
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52166.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62141.68
CD326+ enterocyte, pool1.CNhs13542.11848-124I31512.62
CD326+ enterocyte, pool2.CNhs13197.11849-124I41805.73
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7735.14
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8951.74
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9468.85
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7955.96
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2929.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6379.08
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1368.63
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4568.56
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8540.43
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1290.14
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3289.34
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5234.35
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2616.57
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4618.25
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6534.31
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3775.42
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2352.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9413.48
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11573.85
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21605.18
GP2+ M cell, pool1.CNhs13228.11845-124H92317.03
GP2+ M cell, pool2.CNhs13231.11846-124I11956.52
GP2+ M cell, pool3.CNhs13240.11847-124I21566.91
Ileum epithelium, pool1.CNhs13199.10252-104B93452.92
Ileum epithelium, pool2.CNhs13232.10253-104C12747.63
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81637.04
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I387.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G696.57
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9142.63
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5471.69
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6638.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7541.46
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81310.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11176.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31166.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91138.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21116.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41154.54
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8263.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9252.33
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3278.44
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B785.28
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2216.50
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8270.87
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3342.59
Mouse Astrocytes, donor2.CNhs12078.11552-120C4288.23
Mouse Astrocytes, donor3.CNhs12107.11633-122C4202.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2509.89
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9692.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1705.46
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1899.12
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1862.75
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5734.32
Mouse Granule cells, donor1.CNhs12131.11713-123C3544.23
Mouse Granule cells, donor2.CNhs12357.11731-123E3612.57
Mouse Granule cells, donor3.CNhs12108.11636-122C7541.29
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6224.99
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1293.47
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7202.03
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7231.39
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2261.46
Mouse Microglia, donor1.CNhs12629.11718-123C8106.66
Mouse Microglia, donor2.CNhs12634.11736-123E8174.44
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5450.64
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5414.74
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9472.60
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11126.89
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51279.71
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2509.19
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2456.99
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6443.98
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31718.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31968.56
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71824.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4516.60
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4708.21
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8657.39
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41593.02
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51206.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61377.48
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61391.53
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61446.64
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1896.95
Mouse Schwann, donor1.CNhs12507.11728-123D9840.64
Mouse Schwann, donor2.CNhs12573.11746-123F91211.79
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3546.10
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7492.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C4326.39
Mouse hepatocyte, donor3.CNhs12615.11637-122C8392.36
Mouse hepatocyte, donor6.CNhs13090.11822-124F4320.99
Mouse hepatocyte, donor8.CNhs13091.11824-124F6297.04
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7729.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7979.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3925.88
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8907.38
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6553.94
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1346.48
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8229.32
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6263.09
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11240.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21234.12
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31183.94
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6807.51
accessory axillary lymph node, adult.CNhs10475.1063-29H9752.99
adrenal gland, adult.CNhs10508.49-24D7408.07
adrenal gland, embryo E14.CNhs11038.406-44C5396.41
adrenal gland, embryo E16.CNhs11004.1254-43D6384.54
adrenal gland, embryo E17.CNhs11043.1263-45I1380.75
adrenal gland, embryo E18.CNhs11026.1262-18F5364.30
adrenal gland, neonate N00.CNhs11191.1311-23C1267.63
adrenal gland, neonate N25.CNhs11223.1377-27I3330.25
amnion, adult pregnant day17.5.CNhs10488.583-22A8620.21
aorta, adult.CNhs10498.46-23H1470.96
bone (os femoris), adult.CNhs10483.56-12G2633.38
bone (os femoris), neonate N02.CNhs11227.1985-43F5432.24
bone (os femoris), neonate N16.CNhs11225.1525-43A6448.53
bone (os femoris), neonate N20.CNhs11195.1350-25C3381.11
cecum, adult.CNhs10467.37-13H42492.06
cerebellum, adult.CNhs10494.15-8B21359.09
cerebellum, neonate N30.CNhs11135.1395-42I21301.08
colon, adult.CNhs10468.36-18H72314.44
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7222.62
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1329.35
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4295.69
corpora quadrigemina, adult.CNhs10501.16-22A41792.54
corpus striatum, adult.CNhs10487.19-21D82176.79
corpus striatum, neonate N00.CNhs11226.630-43F1849.42
cortex, adult.CNhs10473.12-14D52945.45
cortex, neonate N30.CNhs11107.1392-42F22720.56
diencephalon, adult.CNhs10482.20-12F21796.33
diencephalon, neonate N30.CNhs11201.1388-42B21756.91
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1279.75
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2370.98
epididymis, adult.CNhs10490.58-23B2611.84
eyeball, adult.CNhs10484.31-12G4618.91
eyeball, embryo E12.CNhs11016.345-16C6278.98
eyeball, embryo E14.CNhs10521.399-16E2386.24
eyeball, embryo E15.CNhs10593.426-16C9474.46
eyeball, embryo E17.CNhs11023.1261-18D4405.85
eyeball, neonate N00.CNhs11207.633-15C6309.77
eyeball, neonate N01.CNhs11140.1532-43E7437.89
eyeball, neonate N02.CNhs11205.1551-44G8415.47
eyeball, neonate N16.CNhs11188.777-19A2653.48
forelimb, embryo E11.CNhs10596.335-25E2398.80
forelimb, embryo E12.CNhs10600.359-14H2323.18
forelimb, embryo E13.CNhs10589.384-1E2359.12
forelimb, embryo E14.CNhs10577.413-26A8427.65
forelimb, embryo E15.CNhs11007.437-20E7413.46
forelimb, embryo E17.CNhs10598.1517-43C4528.30
forelimb, embryo E18.CNhs11008.1520-43B5581.95
gonad, embryo E13.CNhs11044.1564-45I6254.37
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8405.88
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2385.76
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5420.56
heart, embryo E11.CNhs10586.331-24E9376.55
heart, embryo E12.CNhs11015.353-12F5330.45
heart, embryo E13.CNhs11013.376-3I9324.29
heart, embryo E14.CNhs10597.403-26D4370.03
heart, embryo E15.CNhs11017.431-16C8294.75
heart, embryo E16.CNhs11021.457-17C6308.07
heart, embryo E17.CNhs11025.479-18E5289.97
heart, embryo E18.CNhs11030.1283-20G3316.29
heart, neonate N00.CNhs11213.639-21E3192.31
heart, neonate N03.CNhs11221.1349-25I2317.60
heart, neonate N10.CNhs11118.749-24G1429.30
heart, neonate N16.CNhs11209.782-15G1377.38
heart, neonate N20.CNhs11127.821-26I6361.99
heart, neonate N25.CNhs11196.1351-25D3436.25
heart, neonate N30.CNhs11202.1390-42D2308.81
hippocampus, adult.CNhs10478.13-16E82355.46
hippocampus, neonate N00.CNhs11228.627-43G11043.76
intestinal mucosa, adult.CNhs10506.860-29I32798.32
intestine, adult.CNhs10496.178-9A32215.57
intestine, embryo E12.CNhs11019.1251-16I5382.64
intestine, embryo E13.CNhs11010.381-16D5398.52
intestine, embryo E15.CNhs10602.976-16D8661.48
intestine, embryo E16.CNhs10585.463-22H4935.81
intestine, embryo E17.CNhs10582.482-18D31018.71
intestine, embryo E18.CNhs10526.1289-20F71167.03
intestine, neonate N00.CNhs11126.644-26D11998.72
intestine, neonate N01.CNhs11192.1322-23E91205.93
intestine, neonate N06.CNhs11102.688-20B81009.86
intestine, neonate N07.CNhs11095.720-20F21084.91
intestine, neonate N10.CNhs11098.755-23A51035.45
intestine, neonate N20.CNhs11187.827-18D11832.69
intestine, neonate N25.CNhs11121.1352-25E31717.87
intestine, neonate N30.CNhs11131.1384-42G11598.31
kidney, embryo E14.CNhs10606.411-4I9502.05
kidney, embryo E15.CNhs10997.434-16F8353.48
kidney, embryo E16.CNhs10584.464-22A5408.00
kidney, embryo E17.CNhs11028.483-18I2340.10
kidney, embryo E18.CNhs11001.1288-20C7313.43
kidney, neonate N00.CNhs11214.646-21G7243.02
kidney, neonate N10.CNhs11206.758-6D5337.24
kidney, neonate N20.CNhs11113.832-19I1321.94
kidney, neonate N25.CNhs11122.1353-25F3355.76
kidney, neonate N30.CNhs11203.1385-42H1306.52
liver, adult pregnant day01.CNhs10466.508-5B2338.55
liver, embryo E12.CNhs10601.355-15F8335.69
liver, embryo E13.CNhs10524.378-3H6343.00
liver, embryo E14.CNhs10594.409-16E1339.32
liver, embryo E15.CNhs10520.433-16D7327.01
liver, embryo E16.CNhs10523.462-17F5321.49
liver, embryo E17.CNhs10510.481-18A3276.01
liver, embryo E18.CNhs10579.499-43G4315.31
liver, neonate N00.CNhs11117.641-24F4165.54
liver, neonate N03.CNhs11123.1345-25G2360.50
liver, neonate N06.CNhs11101.684-20A8332.10
liver, neonate N07.CNhs11103.716-20H2378.47
liver, neonate N10.CNhs11115.751-24B9309.85
liver, neonate N20.CNhs11220.823-25A3354.37
liver, neonate N25.CNhs11198.1368-26H1360.05
liver, neonate N30.CNhs11106.1382-42D1258.11
lung, adult.CNhs10474.28-22B1940.21
lung, embryo E12.CNhs10522.354-16G2397.93
lung, embryo E14.CNhs10604.404-26F8535.50
lung, embryo E15.CNhs11020.432-17C5490.39
lung, embryo E16.CNhs10998.458-17B6527.11
lung, embryo E17.CNhs10605.480-44A6531.50
lung, embryo E18.CNhs10583.1287-20I6696.28
lung, neonate N00.CNhs11224.640-42C6580.52
lung, neonate N06.CNhs11212.683-20E5602.17
lung, neonate N07.CNhs11111.715-19A3582.67
lung, neonate N10.CNhs11219.750-23E6565.59
lung, neonate N20.CNhs11109.822-18A4574.83
lung, neonate N25.CNhs11119.1359-25C7732.53
lung, neonate N30.CNhs11133.1394-42H2593.35
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1634.83
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11356.50
mammary gland, adult lactating day02.CNhs10480.595-22B6437.67
mammary gland, adult pregnant day19.CNhs10476.588-5H2323.40
medulla oblongata, adult.CNhs10477.17-12C21774.73
medulla oblongata, neonate N30.CNhs11200.1396-42A31479.80
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7501.97
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2781.40
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1533.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2531.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3567.64
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7399.56
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8493.05
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9507.56
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4483.34
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5563.47
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6626.93
olfactory brain, adult.CNhs10489.18-22I91469.40
ovary, adult.CNhs10507.91-2I7432.78
ovary, embryo E18.CNhs11040.505-44H7300.75
ovary, neonate N00.CNhs11217.1299-22I4260.62
oviduct, adult pregnant day01.CNhs10500.988-6G6546.55
pancreas, adult.CNhs10486.34-16E4459.30
pancreas, embryo E14.CNhs11012.405-44F4456.43
pancreas, embryo E15.CNhs11042.1556-45F2470.72
pancreas, embryo E16.CNhs11003.460-26E5579.96
pancreas, embryo E17.CNhs10599.1558-45G3507.62
pancreas, embryo E18.CNhs10580.1535-43I7577.67
pancreas, neonate N00.CNhs11105.645-26G9531.33
pancreas, neonate N01.CNhs11138.1531-43D7465.32
pancreas, neonate N02.CNhs11139.1539-43D8453.11
pancreas, neonate N16.CNhs11136.787-43B6451.62
pancreas, neonate N25.CNhs11094.1555-45E2483.87
pancreas, neonate N30.CNhs11182.1548-44H5384.70
pituitary gland, adult.CNhs10493.21-1G8522.23
pituitary gland, embryo E12.CNhs11018.346-16E6320.69
pituitary gland, embryo E13.CNhs11009.370-44C7295.20
pituitary gland, embryo E14.CNhs11037.398-44A5402.74
pituitary gland, embryo E15.CNhs10592.427-16B9464.63
pituitary gland, embryo E16.CNhs11036.449-43F6458.94
pituitary gland, embryo E17.CNhs11039.1265-44F5475.22
pituitary gland, neonate N00.CNhs11190.1308-22E9357.75
placenta, adult pregnant day10.CNhs10472.539-13I7686.65
placenta, adult pregnant day17.CNhs10464.577-18G3770.43
prostate, adult.CNhs10470.859-1F8539.41
skin, adult.CNhs10492.30-1C3544.62
skin, neonate N00.CNhs11124.650-25G4403.34
skin, neonate N03.CNhs11215.662-22H3511.76
skin, neonate N06.CNhs11097.693-20I5485.49
skin, neonate N10.CNhs11108.762-6C4488.81
small intestine, neonate N16.CNhs11114.790-21I11594.40
spinal cord, adult.CNhs10505.24-13C92062.49
spleen, adult.CNhs10465.25-2G2411.29
spleen, embryo E16.CNhs11035.461-43C1512.66
spleen, embryo E18.CNhs11011.1271-21F2465.95
spleen, neonate N10.CNhs11116.752-24D1287.83
spleen, neonate N20.CNhs11112.824-19H1282.00
spleen, neonate N25.CNhs11099.1354-25G3366.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6267.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9290.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3303.90
stomach, adult.CNhs10503.33-1H6960.40
stomach, embryo E12.CNhs10588.356-43E3408.39
stomach, embryo E15.CNhs10603.1252-16G8502.61
stomach, embryo E16.CNhs11022.459-17D4528.69
stomach, embryo E17.CNhs11006.1035-18D5583.57
stomach, embryo E18.CNhs10999.1286-20C6645.70
stomach, neonate N03.CNhs11193.1340-24B8648.56
stomach, neonate N07.CNhs11210.718-18A9605.35
stomach, neonate N25.CNhs11104.1355-25E4779.25
stomach, neonate N30.CNhs11134.1386-42I11242.49
submandibular gland, adult.CNhs10469.59-29C1551.75
testis, adult.CNhs10504.57-7G51084.55
testis, embryo E13.CNhs11031.389-23F5279.00
testis, embryo E15.CNhs11034.443-27C5287.07
testis, embryo E16.CNhs11033.470-26G5293.62
testis, embryo E17.CNhs11029.486-18I5315.80
testis, embryo E18.CNhs11027.503-18G5317.30
testis, neonate N00.CNhs11189.1300-22B7171.22
testis, neonate N07.CNhs11222.726-26I4264.58
testis, neonate N10.CNhs11204.763-44D9277.14
testis, neonate N20.CNhs11110.839-18H3582.46
testis, neonate N30.CNhs11130.1391-42E2674.85
thymus, adult.CNhs10471.38-12B5484.45
thymus, embryo E14.CNhs11041.402-44I4389.84
thymus, embryo E15.CNhs11005.430-45I2338.23
thymus, embryo E16.CNhs11002.456-26C5375.08
thymus, embryo E17.CNhs10581.478-18C1401.20
thymus, embryo E18.CNhs10595.1273-19G4389.42
thymus, neonate N02.CNhs11181.1541-43F8284.02
thymus, neonate N03.CNhs11137.2104-43C7421.06
thymus, neonate N06.CNhs11197.681-26C4326.93
thymus, neonate N07.CNhs11211.713-19D3323.12
thymus, neonate N10.CNhs11194.748-24E4364.59
thymus, neonate N20.CNhs11186.820-7A2375.02
thymus, neonate N25.CNhs11125.1362-25G7351.17
thymus, neonate N30.CNhs11132.1393-42G2285.30
tongue, adult.CNhs10499.32-1B4450.97
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3505.46
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7480.87
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5666.33
urinary bladder, adult.CNhs10481.879-12E4522.38
uterus, adult pregnant day19.CNhs10497.590-15F5657.83
uterus, adult.CNhs10509.92-27E5440.30
vagina, adult.CNhs10502.89-27D5438.17
vesicular gland, adult.CNhs10491.51-27F8491.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13394.16
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23675.70
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33570.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72889.02
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43068.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53243.66
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63053.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72889.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83222.30
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93077.05
whole body, embryo E11.CNhs11014.324-5I8422.83
whole body, embryo E12.CNhs10587.857-27C9437.73
whole body, embryo E13.CNhs10512.372-23H2416.59
whole body, embryo E14.5.CNhs10578.420-27D2458.74
whole body, embryo E14.CNhs10519.395-14B1537.87
whole body, embryo E16.CNhs10514.453-14F2545.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5493.39
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5472.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5529.84
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5514.24
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5544.73
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5488.35
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5482.25
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5492.35
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5495.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5426.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5477.21
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5459.90
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5450.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5437.33
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5442.30
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5460.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5464.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5496.50
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5493.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5473.67
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5479.09
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5471.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5441.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5372.04
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5427.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5435.98
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5473.48
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5496.26
whole body, embryo E17.5.CNhs10513.490-9F9512.55
whole body, embryo E17.CNhs10517.475-3I5580.56
whole body, embryo E18.CNhs10516.493-3B3535.00
whole body, neonate N00.CNhs10525.657-19C2473.36
whole body, neonate N01.CNhs10576.659-23C6379.32
whole body, neonate N06.CNhs10515.692-21D1493.24
whole body, neonate N10.CNhs10518.761-6B4621.17





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine6.90e-1131
adult organism3.44e-0951
gray matter6.37e-0934
regional part of nervous system9.67e-0954
gastrointestinal system9.74e-0947
occipital lobe3.95e-0810
visual cortex3.95e-0810
neocortex3.95e-0810
nervous system5.15e-0875
organ system subdivision5.71e-08194
neural tube6.51e-0852
neural rod6.51e-0852
future spinal cord6.51e-0852
neural keel6.51e-0852
central nervous system1.74e-0773
brain grey matter3.51e-0729
regional part of telencephalon3.51e-0729
telencephalon3.51e-0729
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