FFCP PHASE1:Mm9::chr12:104689302..104689342,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=217 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:104689302..104689342,+ | |||
|description=CAGE_peak_at_chr12:104689302..104689342,+ | |description=CAGE_peak_at_chr12:104689302..104689342,+ | ||
|id=chr12:104689302..104689342,+ | |id=chr12:104689302..104689342,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.56e-11!9;CL:0002251!2.56e-11!9;CL:0000239!2.97e-08!6;CL:0000677!2.97e-08!6;CL:0000212!2.97e-08!6;CL:0000584!2.97e-08!6;CL:0000075!6.44e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.07e-18,9;CL:0002251,3.07e-18,9;CL:0000239,5.29e-13,6;CL:0000677,5.29e-13,6;CL:0000584,5.29e-13,6;CL:0000075,4.71e-11,7;CL:0002076,2.61e-10,15;CL:0000066,4.34e-10,25;CL:0000223,2.40e-07,20;CL:0000682,5.83e-07,3;CL:0002250,8.26e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.74e-26!59;UBERON:0000160!7.11e-24!43;UBERON:0000344!8.69e-19!15;UBERON:0001242!3.77e-16!13;UBERON:0000060!3.77e-16!13;UBERON:0001262!3.77e-16!13;UBERON:0004786!3.77e-16!13;UBERON:0004923!6.23e-13!24;UBERON:0003350!2.56e-11!9;UBERON:0004808!2.56e-11!9;UBERON:0001277!2.56e-11!9;UBERON:0004119!5.26e-11!130;UBERON:0000925!5.26e-11!130;UBERON:0006595!5.26e-11!130;UBERON:0001007!1.18e-10!128;UBERON:0001555!1.18e-10!128;UBERON:0007026!1.18e-10!128;UBERON:0004921!2.48e-09!126;UBERON:0004185!2.48e-09!126;UBERON:0000485!7.47e-09!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.44e-48,31;UBERON:0005409,7.64e-43,47;UBERON:0000344,2.73e-27,15;UBERON:0001242,7.75e-23,13;UBERON:0001262,7.75e-23,13;UBERON:0004786,7.75e-23,13;UBERON:0003350,3.07e-18,9;UBERON:0004808,3.07e-18,9;UBERON:0001277,3.07e-18,9;UBERON:0004923,7.45e-16,24;UBERON:0001007,8.70e-16,116;UBERON:0001555,8.70e-16,116;UBERON:0007026,8.70e-16,116;UBERON:0004119,2.14e-15,118;UBERON:0000925,2.14e-15,118;UBERON:0006595,2.14e-15,118;UBERON:0000485,1.24e-14,11;UBERON:0004921,1.39e-13,114 | |||
|phase1_expression=0,3.48975407639361,1.36499771816861,7.86406949397758,8.01433167914156,1.51091344720701,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8792953197868,14.6821939882989,2.8711598205751,1.29228598847722,1.72376986148711,12.9215925230334,4.28451220591882,0.665191531965914,0,0,0,1.44425809875637,2.32728503501889,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0.649776417447669,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,7.53613606145796,0,0.148442139064825,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,3.72783522436244,0,0,20.9474785271045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631325567659422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,41.3023478729747,24.5939026997096,0,0,0.515469845288373,0.80673409849337,1.55664630691409,8.17970192284004,29.4208018157597,16.1404975629531,22.8715040008245,10.9426059622633,15.4021628824105,15.2799299471218,27.2333942842115,17.5244320463843,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0.505157755894224,0.358794827043824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32585463851399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,16.0314460146418,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0,0,0.540026704109006,0.209088296014469,1.9652630737156,0.404593039154462,1.1571483801547,4.4498510137285,1.8146096260851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.618105171716683,0,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.459483751644906,0,0.115884325944855,0,0,0,0.685738504770831,0.177475806159338,0,0,0.0941093804153306,0.25384382367503,0.182927972872773,0,0.135804113845862,0,0,0.197008964751127,0.409231043169689,0.309873682371932,0.385813221962283,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,3.48975407639361,1.36499771816861,7.86406949397758,8.01433167914156,1.51091344720701,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8792953197868,14.6821939882989,2.8711598205751,1.29228598847722,1.72376986148711,12.9215925230334,4.28451220591882,0.665191531965914,0,0,0,1.44425809875637,2.32728503501889,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0.649776417447669,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,7.53613606145796,0,0.148442139064825,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,3.72783522436244,0,0,20.9474785271045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631325567659422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,41.3023478729747,24.5939026997096,0,0,0.515469845288373,0.80673409849337,1.55664630691409,8.17970192284004,29.4208018157597,16.1404975629531,22.8715040008245,10.9426059622633,15.4021628824105,15.2799299471218,27.2333942842115,17.5244320463843,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0.505157755894224,0.358794827043824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32585463851399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,16.0314460146418,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0,0,0.540026704109006,0.209088296014469,1.9652630737156,0.404593039154462,1.1571483801547,4.4498510137285,1.8146096260851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.618105171716683,0,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.459483751644906,0,0.115884325944855,0,0,0,0.685738504770831,0.177475806159338,0,0,0.0941093804153306,0.25384382367503,0.182927972872773,0,0.135804113845862,0,0,0.197008964751127,0.409231043169689,0.309873682371932,0.385813221962283,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr12:104689302..104689342,+ | |short_description=p@chr12:104689302..104689342,+ | ||
}} | }} |
Latest revision as of 15:00, 4 August 2015
Short description: | p@chr12:104689302..104689342, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:104689302..104689342, + |
Coexpression cluster: | MCL_coexpression_mm9:217 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.07e-18 | 9 |
epithelial cell of alimentary canal | 3.07e-18 | 9 |
brush border epithelial cell | 5.29e-13 | 6 |
gut absorptive cell | 5.29e-13 | 6 |
enterocyte | 5.29e-13 | 6 |
columnar/cuboidal epithelial cell | 4.71e-11 | 7 |
endo-epithelial cell | 2.61e-10 | 15 |
epithelial cell | 4.34e-10 | 25 |
endodermal cell | 2.40e-07 | 20 |
M cell of gut | 5.83e-07 | 3 |
intestinal crypt stem cell | 8.26e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.44e-48 | 31 |
gastrointestinal system | 7.64e-43 | 47 |
mucosa | 2.73e-27 | 15 |
intestinal mucosa | 7.75e-23 | 13 |
wall of intestine | 7.75e-23 | 13 |
gastrointestinal system mucosa | 7.75e-23 | 13 |
epithelium of mucosa | 3.07e-18 | 9 |
gastrointestinal system epithelium | 3.07e-18 | 9 |
intestinal epithelium | 3.07e-18 | 9 |
organ component layer | 7.45e-16 | 24 |
digestive system | 8.70e-16 | 116 |
digestive tract | 8.70e-16 | 116 |
primitive gut | 8.70e-16 | 116 |
endoderm-derived structure | 2.14e-15 | 118 |
endoderm | 2.14e-15 | 118 |
presumptive endoderm | 2.14e-15 | 118 |
simple columnar epithelium | 1.24e-14 | 11 |
subdivision of digestive tract | 1.39e-13 | 114 |