FFCP PHASE1:Mm9::chr4:116793891..116793923,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr4:116793891..116793923,- to FFCP PHASE1:Mm9::chr4:116793891..116793923,-: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2264 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-21bp_to_ENSMUST00000153303_5end | |||
|cluster_id=chr4:116793891..116793923,- | |||
|description=CAGE_peak_2_at_ENSMUST00000153303_5end | |||
|id=chr4:116793891..116793923,- | |||
|ontology_enrichment_celltype=CL:0000988!3.48e-11!32;CL:0002032!3.48e-11!32;CL:0000037!3.48e-11!32;CL:0000566!3.48e-11!32;CL:0000837!3.48e-11!32;CL:0002031!1.08e-08!25;CL:0000838!2.06e-07!12;CL:0000542!2.99e-07!13;CL:0000051!2.99e-07!13;CL:0000084!4.91e-07!11;CL:0000827!4.91e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.87e-12,32;CL:0002032,7.87e-12,32;CL:0000037,7.87e-12,32;CL:0000837,7.87e-12,32;CL:0002031,3.09e-09,25;CL:0000838,1.23e-07,12;CL:0000542,1.82e-07,13;CL:0000051,1.82e-07,13;CL:0000084,3.03e-07,11;CL:0000827,3.03e-07,11;CL:0000738,7.55e-07,17;CL:0002087,7.55e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.05e-16!45;UBERON:0003061!6.05e-16!45;UBERON:0002193!1.61e-15!48;UBERON:0004177!1.13e-11!29;UBERON:0002405!4.99e-10!70;UBERON:0002370!2.99e-09!23;UBERON:0000974!2.99e-09!23;UBERON:0004807!2.99e-09!23;UBERON:0005058!2.99e-09!23;UBERON:0003351!2.99e-09!23;UBERON:0009113!2.99e-09!23;UBERON:0003295!2.99e-09!23;UBERON:0009722!2.99e-09!23;UBERON:0005562!2.99e-09!23;UBERON:0007690!2.99e-09!23;UBERON:0006562!5.35e-09!24;UBERON:0001557!5.35e-09!24;UBERON:0001042!5.35e-09!24;UBERON:0008814!5.35e-09!24;UBERON:0009145!5.35e-09!24;UBERON:0003408!2.48e-08!24;UBERON:0000072!7.98e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.77e-17,45;UBERON:0003061,8.77e-17,45;UBERON:0002193,4.29e-16,48;UBERON:0002405,4.29e-16,48;UBERON:0004177,2.34e-12,29;UBERON:0005057,2.34e-12,29;UBERON:0002370,7.77e-10,23;UBERON:0000974,7.77e-10,23;UBERON:0004807,7.77e-10,23;UBERON:0005058,7.77e-10,23;UBERON:0003351,7.77e-10,23;UBERON:0009113,7.77e-10,23;UBERON:0003295,7.77e-10,23;UBERON:0009722,7.77e-10,23;UBERON:0005562,7.77e-10,23;UBERON:0007690,7.77e-10,23;UBERON:0000077,1.17e-09,35;UBERON:0006562,1.45e-09,24;UBERON:0001557,1.45e-09,24;UBERON:0001042,1.45e-09,24;UBERON:0008814,1.45e-09,24;UBERON:0009145,1.45e-09,24;UBERON:0003408,7.05e-09,24;UBERON:0000072,2.00e-07,27 | |||
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| ||
|short_description=p2@ENSMUST00000153303 | |||
}} | }} |
Latest revision as of 15:02, 4 August 2015
Short description: | p2@ENSMUST00000153303 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000153303_5end |
Coexpression cluster: | MCL_coexpression_mm9:2264 |
Association with transcript: | -21bp_to_ENSMUST00000153303_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 7.87e-12 | 32 |
hematopoietic oligopotent progenitor cell | 7.87e-12 | 32 |
hematopoietic stem cell | 7.87e-12 | 32 |
hematopoietic multipotent progenitor cell | 7.87e-12 | 32 |
hematopoietic lineage restricted progenitor cell | 3.09e-09 | 25 |
lymphoid lineage restricted progenitor cell | 1.23e-07 | 12 |
lymphocyte | 1.82e-07 | 13 |
common lymphoid progenitor | 1.82e-07 | 13 |
T cell | 3.03e-07 | 11 |
pro-T cell | 3.03e-07 | 11 |
leukocyte | 7.55e-07 | 17 |
nongranular leukocyte | 7.55e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.77e-17 | 45 |
blood island | 8.77e-17 | 45 |
hemolymphoid system | 4.29e-16 | 48 |
immune system | 4.29e-16 | 48 |
hemopoietic organ | 2.34e-12 | 29 |
immune organ | 2.34e-12 | 29 |
thymus | 7.77e-10 | 23 |
neck | 7.77e-10 | 23 |
respiratory system epithelium | 7.77e-10 | 23 |
hemolymphoid system gland | 7.77e-10 | 23 |
pharyngeal epithelium | 7.77e-10 | 23 |
thymic region | 7.77e-10 | 23 |
pharyngeal gland | 7.77e-10 | 23 |
entire pharyngeal arch endoderm | 7.77e-10 | 23 |
thymus primordium | 7.77e-10 | 23 |
early pharyngeal endoderm | 7.77e-10 | 23 |
mixed endoderm/mesoderm-derived structure | 1.17e-09 | 35 |
pharynx | 1.45e-09 | 24 |
upper respiratory tract | 1.45e-09 | 24 |
chordate pharynx | 1.45e-09 | 24 |
pharyngeal arch system | 1.45e-09 | 24 |
pharyngeal region of foregut | 1.45e-09 | 24 |
gland of gut | 7.05e-09 | 24 |
segment of respiratory tract | 2.00e-07 | 27 |