FFCP PHASE1:Mm9::chr5:8422642..8422693,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=27214|HGNC=|MCL_coexpression_id=151|UniProt=Q9QZ41|association_with_transcript=0bp_to_ENSMUST00000002368,ENSMUST00000166364,ENSMUST00000170927_5end|description=CAGE_peak_1_at_Dbf4_5end|id=chr5:8422642..8422693,-|ontology_enrichment_celltype=CL:0000988!8.70e-07!32;CL:0002032!8.70e-07!32;CL:0000037!8.70e-07!32;CL:0000566!8.70e-07!32;CL:0000837!8.70e-07!32|ontology_enrichment_celltype_v019_2=CL:0000988,8.67e-07,32;CL:0002032,8.67e-07,32;CL:0000037,8.67e-07,32;CL:0000837,8.67e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!2.88e-08!29;UBERON:0002390!2.33e-07!45;UBERON:0003061!2.33e-07!45;UBERON:0000072!5.75e-07!27;UBERON:0002193!6.52e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.87e-08,29;UBERON:0005057,2.87e-08,29;UBERON:0002390,2.54e-07,45;UBERON:0003061,2.54e-07,45;UBERON:0000072,5.73e-07,27;UBERON:0002193,7.06e-07,48;UBERON:0002405,7.06e-07,48|phase1_expression=3.84357233051505,5.23463111459042,6.3699893514535,5.14189159221611,2.00358291978539,14.2697381125106,14.9512089981136,15.1074288426644,26.0459135980583,18.7251621057595,7.70480857014772,6.54131703761759,15.5792664237397,17.8337620934755,40.6393909415109,30.3712901084739,31.4802845157666,7.5710919685977,10.6949258212476,7.63901373236454,8.92954546586233,25.2199016050249,31.3439746966722,8.15961356246374,10.0940083669555,6.31655160526522,6.8921919385452,9.04979177280734,5.89072600314759,10.837295579677,11.5299865540758,20.9560122241678,22.7573971406291,31.6963362030877,18.4865036640816,20.613096024453,20.8252743387616,20.9265815368454,32.0347491254758,31.4114246384279,21.7645650571475,20.4913645487534,18.4493934151838,7.05022180663233,6.58950052926845,9.54443111240744,3.12956537739216,6.1047043786525,3.07560655828261,2.3331587888914,6.01941612989059,4.31257693094915,12.751478060388,32.6412963905105,43.3561000893779,16.2073444702647,12.0344044774278,6.70373719960675,2.02316460859598,2.11596391708813,1.90149421051854,4.40497891689872,8.00365316500025,3.1496490104849,0.988866362566974,3.5524005747305,1.79760066311043,2.30530983192933,8.70992743391212,6.48028503992115,8.41299845405528,1.14260393761521,2.20868540951614,9.0643191419066,9.4887016308054,10.1114066527102,1.10115880999389,0.893811366596314,0.614426133024974,0.923204014111357,1.64677758484337,2.08365348222704,0.279182999001381,0,0.15279824777681,3.83017161115768,3.41692033917847,2.42319279572891,5.45228591998925,16.1723138628521,3.47837386442013,2.58127163094416,3.39985666853875,1.61910957491345,1.29955283489534,1.79210754838934,7.02222100658759,16.5317412900716,13.5088722393492,11.3068663843309,4.64783285263046,10.2661181931454,7.64415719119937,21.3320010945999,43.2982082022428,36.9905403593644,33.8701378159905,5.82337786567206,12.6879562987114,1.03909497345377,13.3583701609925,8.22056791442781,9.4552353874984,6.33035090321015,9.52468527799209,3.39299796590124,14.8316980640624,1.15679485535929,19.4614321428972,13.7501822455298,17.8881629952919,17.9403843660032,3.72783522436244,0.585561594023094,0.628340120440365,8.68553987709211,36.3039827252938,22.1964010467561,27.574239274855,0.149790639404823,0.457500602818626,3.76963056338593,0.521472960576829,0.511430914660661,0,1.1356888414743,11.915205570487,17.6657898266332,2.0217820674694,1.89397670297827,18.7373437866293,19.0818746679783,19.4467100189777,15.3718914192429,21.0232782377603,21.3949912875699,19.021450085625,4.13925393182425,23.0657752438141,25.9075329829912,16.7153567955751,14.6861140726475,11.6779844674751,16.3678518265418,9.67176041117334,19.7043924150308,27.3863143052162,24.9627469901274,35.2362739250535,17.3985648929822,20.8728193383176,14.7650890398032,16.0986420197943,16.3314312350345,13.5755059340893,13.2544348507732,14.7550370769791,12.1435956061856,5.9241545968853,3.61168420974009,3.16168357228837,1.16959989940266,3.51280184465681,3.62357330653004,0.210289948564127,3.91037527041281,3.63460661282178,12.6936271998501,21.7554015545939,21.8302471548812,20.3610588888907,14.3195302482573,12.6755484991576,9.70150693174052,5.69434873853414,8.07024878147653,8.54539709920916,9.15199771389294,7.21367122340745,8.08937467788799,9.07779809473716,9.16049856970089,11.0007382552787,19.3079986310442,27.0498565615393,21.5870407516033,13.3827216145662,12.9049908598186,8.28398636327771,2.80459281161244,4.86696056308262,3.82531208157582,4.44678940630723,26.1946815974268,29.090731276754,29.4569367224158,33.6747801504915,27.9765505312804,20.624693994295,21.28951417136,15.5649817704034,15.1008777253445,18.6898668485561,9.30352369171258,7.48890415474945,5.55673531483646,7.3552939543984,4.3419916922703,4.80358294433172,21.6020209418353,25.096606372072,24.2735472658519,24.4077858220042,17.7556632888325,9.04565835366852,9.75668239288994,10.4039195110086,10.1873757238436,7.33491935824441,3.11340297959902,4.48980952851328,6.79850575333104,21.1107797514981,21.7562273527484,12.2941068254759,7.17435540392304,0.642202359951168,1.05490517932983,21.4754778443445,3.02965112645248,34.390395916372,32.0159770323244,24.3428439438063,32.9776941174522,16.2643032080148,18.6830510320629,35.2185310457158,21.3346776275258,18.1832377855401,0,10.2196861349953,6.94455854302295,12.8680697889325,5.27904393512113,3.98235415019888,16.0235219862288,13.6045600634138,16.2200368590072,6.496641643377,7.37844355065426,11.3708448994017,11.9966130727577,11.7644134866958,6.95280867458795,5.27093042874994,5.15677716240934,0.680879211507576,18.9064148732876,8.27895576209629,7.28745919107414,6.91626911204867,6.77801506887868,6.41741180348272,2.43571959291679,15.9576761483323,12.921756322693,4.6310963591542,7.4198813823666,16.9537648030701,15.6210475563924,14.6827983123858,11.8181447816444,5.53813589596716,0.927126510052548,22.3840853845187,14.4470807574256,25.3716502496505,35.0365330028725,36.0872761183506,27.6821589579892,20.7373684592503,21.9723780148143,20.3153961492503,8.59203556213602,21.5108475635172,21.9585024496997,15.4447637375176,15.2634456090562,11.3548533148012,10.6542833644008,8.59595939543494,6.54389854960074,6.86959358446502,3.72803587852155,34.9489621984198,20.4837668080251,13.0712207461107,16.5283510092441,13.8201011121172,15.3750074196608,12.9092962510329,15.754730566118,19.0844006854794,21.7425708743405,27.0748205882394,24.3328562883697,15.4071163620525,18.8988161183282,27.4132936483147,32.5828586114816,24.6364879928768,24.1592853535137,30.2763530707883,25.7464447367776,25.7579006493899,27.1222438018101,25.1441332308561,26.9393156592922,21.972857610135,4.0811469050738,41.5113732809501,53.4694585392475,36.5988463673691,2.12508553435409,5.06742683718191,6.41030684935428,9.00347192132076,3.00943262421218,0.564751842617067,2.30162618253588,1.71868654031819,1.54667864109319,0,1.5107877947794,0,0,0.453142408984205,0,29.8907561042429,25.138567024265,13.4879548545766,19.4485373654635,18.4459583112624,11.9498280492509,10.2233494788743,13.598313777767,10.2694147069381,12.1294661646623,12.673964994512,11.1289541417785,12.0797544636148,10.8842759088278,10.3383844120104,16.1939855036245,11.1248952907061,12.1532808892134,5.76920261124629,11.3343168503486,12.6861623382604,12.0683548188349,13.8292990169446,15.2613737463945,13.1753132581463,11.9306597127264,12.073246209603,8.68130047744881,11.1359373353607,16.2731258780744,11.0330566855482,10.0474572023075,12.2769312950907,13.3245683419931,9.25951732709479,7.74412791607632,8.4215379040347,10.5286816483666,10.9034349279241,7.72069966918304,11.1296561097802|short_description=p1@Dbf4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:27214 | |||
|HGNC= | |||
|MCL_coexpression_id=151 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9QZ41 | |||
|association_with_transcript=0bp_to_ENSMUST00000002368,ENSMUST00000166364,ENSMUST00000170927_5end | |||
|cluster_id=chr5:8422642..8422693,- | |||
|description=CAGE_peak_1_at_Dbf4_5end | |||
|id=chr5:8422642..8422693,- | |||
|ontology_enrichment_celltype=CL:0000988!8.70e-07!32;CL:0002032!8.70e-07!32;CL:0000037!8.70e-07!32;CL:0000566!8.70e-07!32;CL:0000837!8.70e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,8.67e-07,32;CL:0002032,8.67e-07,32;CL:0000037,8.67e-07,32;CL:0000837,8.67e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.88e-08!29;UBERON:0002390!2.33e-07!45;UBERON:0003061!2.33e-07!45;UBERON:0000072!5.75e-07!27;UBERON:0002193!6.52e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.87e-08,29;UBERON:0005057,2.87e-08,29;UBERON:0002390,2.54e-07,45;UBERON:0003061,2.54e-07,45;UBERON:0000072,5.73e-07,27;UBERON:0002193,7.06e-07,48;UBERON:0002405,7.06e-07,48 | |||
|phase1_expression=3.84357233051505,5.23463111459042,6.3699893514535,5.14189159221611,2.00358291978539,14.2697381125106,14.9512089981136,15.1074288426644,26.0459135980583,18.7251621057595,7.70480857014772,6.54131703761759,15.5792664237397,17.8337620934755,40.6393909415109,30.3712901084739,31.4802845157666,7.5710919685977,10.6949258212476,7.63901373236454,8.92954546586233,25.2199016050249,31.3439746966722,8.15961356246374,10.0940083669555,6.31655160526522,6.8921919385452,9.04979177280734,5.89072600314759,10.837295579677,11.5299865540758,20.9560122241678,22.7573971406291,31.6963362030877,18.4865036640816,20.613096024453,20.8252743387616,20.9265815368454,32.0347491254758,31.4114246384279,21.7645650571475,20.4913645487534,18.4493934151838,7.05022180663233,6.58950052926845,9.54443111240744,3.12956537739216,6.1047043786525,3.07560655828261,2.3331587888914,6.01941612989059,4.31257693094915,12.751478060388,32.6412963905105,43.3561000893779,16.2073444702647,12.0344044774278,6.70373719960675,2.02316460859598,2.11596391708813,1.90149421051854,4.40497891689872,8.00365316500025,3.1496490104849,0.988866362566974,3.5524005747305,1.79760066311043,2.30530983192933,8.70992743391212,6.48028503992115,8.41299845405528,1.14260393761521,2.20868540951614,9.0643191419066,9.4887016308054,10.1114066527102,1.10115880999389,0.893811366596314,0.614426133024974,0.923204014111357,1.64677758484337,2.08365348222704,0.279182999001381,0,0.15279824777681,3.83017161115768,3.41692033917847,2.42319279572891,5.45228591998925,16.1723138628521,3.47837386442013,2.58127163094416,3.39985666853875,1.61910957491345,1.29955283489534,1.79210754838934,7.02222100658759,16.5317412900716,13.5088722393492,11.3068663843309,4.64783285263046,10.2661181931454,7.64415719119937,21.3320010945999,43.2982082022428,36.9905403593644,33.8701378159905,5.82337786567206,12.6879562987114,1.03909497345377,13.3583701609925,8.22056791442781,9.4552353874984,6.33035090321015,9.52468527799209,3.39299796590124,14.8316980640624,1.15679485535929,19.4614321428972,13.7501822455298,17.8881629952919,17.9403843660032,3.72783522436244,0.585561594023094,0.628340120440365,8.68553987709211,36.3039827252938,22.1964010467561,27.574239274855,0.149790639404823,0.457500602818626,3.76963056338593,0.521472960576829,0.511430914660661,0,1.1356888414743,11.915205570487,17.6657898266332,2.0217820674694,1.89397670297827,18.7373437866293,19.0818746679783,19.4467100189777,15.3718914192429,21.0232782377603,21.3949912875699,19.021450085625,4.13925393182425,23.0657752438141,25.9075329829912,16.7153567955751,14.6861140726475,11.6779844674751,16.3678518265418,9.67176041117334,19.7043924150308,27.3863143052162,24.9627469901274,35.2362739250535,17.3985648929822,20.8728193383176,14.7650890398032,16.0986420197943,16.3314312350345,13.5755059340893,13.2544348507732,14.7550370769791,12.1435956061856,5.9241545968853,3.61168420974009,3.16168357228837,1.16959989940266,3.51280184465681,3.62357330653004,0.210289948564127,3.91037527041281,3.63460661282178,12.6936271998501,21.7554015545939,21.8302471548812,20.3610588888907,14.3195302482573,12.6755484991576,9.70150693174052,5.69434873853414,8.07024878147653,8.54539709920916,9.15199771389294,7.21367122340745,8.08937467788799,9.07779809473716,9.16049856970089,11.0007382552787,19.3079986310442,27.0498565615393,21.5870407516033,13.3827216145662,12.9049908598186,8.28398636327771,2.80459281161244,4.86696056308262,3.82531208157582,4.44678940630723,26.1946815974268,29.090731276754,29.4569367224158,33.6747801504915,27.9765505312804,20.624693994295,21.28951417136,15.5649817704034,15.1008777253445,18.6898668485561,9.30352369171258,7.48890415474945,5.55673531483646,7.3552939543984,4.3419916922703,4.80358294433172,21.6020209418353,25.096606372072,24.2735472658519,24.4077858220042,17.7556632888325,9.04565835366852,9.75668239288994,10.4039195110086,10.1873757238436,7.33491935824441,3.11340297959902,4.48980952851328,6.79850575333104,21.1107797514981,21.7562273527484,12.2941068254759,7.17435540392304,0.642202359951168,1.05490517932983,21.4754778443445,3.02965112645248,34.390395916372,32.0159770323244,24.3428439438063,32.9776941174522,16.2643032080148,18.6830510320629,35.2185310457158,21.3346776275258,18.1832377855401,0,10.2196861349953,6.94455854302295,12.8680697889325,5.27904393512113,3.98235415019888,16.0235219862288,13.6045600634138,16.2200368590072,6.496641643377,7.37844355065426,11.3708448994017,11.9966130727577,11.7644134866958,6.95280867458795,5.27093042874994,5.15677716240934,0.680879211507576,18.9064148732876,8.27895576209629,7.28745919107414,6.91626911204867,6.77801506887868,6.41741180348272,2.43571959291679,15.9576761483323,12.921756322693,4.6310963591542,7.4198813823666,16.9537648030701,15.6210475563924,14.6827983123858,11.8181447816444,5.53813589596716,0.927126510052548,22.3840853845187,14.4470807574256,25.3716502496505,35.0365330028725,36.0872761183506,27.6821589579892,20.7373684592503,21.9723780148143,20.3153961492503,8.59203556213602,21.5108475635172,21.9585024496997,15.4447637375176,15.2634456090562,11.3548533148012,10.6542833644008,8.59595939543494,6.54389854960074,6.86959358446502,3.72803587852155,34.9489621984198,20.4837668080251,13.0712207461107,16.5283510092441,13.8201011121172,15.3750074196608,12.9092962510329,15.754730566118,19.0844006854794,21.7425708743405,27.0748205882394,24.3328562883697,15.4071163620525,18.8988161183282,27.4132936483147,32.5828586114816,24.6364879928768,24.1592853535137,30.2763530707883,25.7464447367776,25.7579006493899,27.1222438018101,25.1441332308561,26.9393156592922,21.972857610135,4.0811469050738,41.5113732809501,53.4694585392475,36.5988463673691,2.12508553435409,5.06742683718191,6.41030684935428,9.00347192132076,3.00943262421218,0.564751842617067,2.30162618253588,1.71868654031819,1.54667864109319,0,1.5107877947794,0,0,0.453142408984205,0,29.8907561042429,25.138567024265,13.4879548545766,19.4485373654635,18.4459583112624,11.9498280492509,10.2233494788743,13.598313777767,10.2694147069381,12.1294661646623,12.673964994512,11.1289541417785,12.0797544636148,10.8842759088278,10.3383844120104,16.1939855036245,11.1248952907061,12.1532808892134,5.76920261124629,11.3343168503486,12.6861623382604,12.0683548188349,13.8292990169446,15.2613737463945,13.1753132581463,11.9306597127264,12.073246209603,8.68130047744881,11.1359373353607,16.2731258780744,11.0330566855482,10.0474572023075,12.2769312950907,13.3245683419931,9.25951732709479,7.74412791607632,8.4215379040347,10.5286816483666,10.9034349279241,7.72069966918304,11.1296561097802 | |||
|short_description=p1@Dbf4 | |||
}} |
Revision as of 15:43, 4 August 2015
Short description: | p1@Dbf4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dbf4_5end |
Coexpression cluster: | MCL_coexpression_mm9:151 |
Association with transcript: | 0bp_to_ENSMUST00000002368, ENSMUST00000166364, ENSMUST00000170927_5end |
EntrezGene: | 27214 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 8.67e-07 | 32 |
hematopoietic oligopotent progenitor cell | 8.67e-07 | 32 |
hematopoietic stem cell | 8.67e-07 | 32 |
hematopoietic multipotent progenitor cell | 8.67e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.87e-08 | 29 |
immune organ | 2.87e-08 | 29 |
hematopoietic system | 2.54e-07 | 45 |
blood island | 2.54e-07 | 45 |
segment of respiratory tract | 5.73e-07 | 27 |
hemolymphoid system | 7.06e-07 | 48 |
immune system | 7.06e-07 | 48 |