FFCP PHASE1:Mm9::chr14:66599709..66599729,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=290 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:66599709..66599729,+ | |||
|description=CAGE_peak_at_chr14:66599709..66599729,+ | |description=CAGE_peak_at_chr14:66599709..66599729,+ | ||
|id=chr14:66599709..66599729,+ | |id=chr14:66599709..66599729,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.30e-13,5;CL:0000068,5.06e-09,3;CL:0002202,5.06e-09,3;CL:0000069,5.06e-09,3;CL:0002632,5.06e-09,3;CL:0002368,5.06e-09,3;CL:0000307,5.06e-09,3;CL:0000377,5.06e-09,3;CL:0000223,3.51e-07,20;CL:0000066,6.20e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!2.99e-13!79;UBERON:0000062!5.98e-12!269;UBERON:0002365!8.53e-09!25;UBERON:0002330!8.53e-09!25;UBERON:0002107!1.66e-08!22;UBERON:0007499!1.66e-08!22;UBERON:0006925!1.66e-08!22;UBERON:0009497!1.66e-08!22;UBERON:0000015!1.66e-08!22;UBERON:0002423!1.66e-08!22;UBERON:0006235!1.66e-08!22;UBERON:0008835!1.66e-08!22;UBERON:0003894!1.66e-08!22;UBERON:0004161!1.66e-08!22;UBERON:0008836!1.66e-08!22;UBERON:0003886!2.85e-08!38;UBERON:0005177!6.82e-08!85;UBERON:0009854!8.49e-08!23;UBERON:0009856!8.49e-08!23;UBERON:0002553!8.75e-08!39;UBERON:0002323!1.21e-07!37;UBERON:0004458!1.21e-07!37;UBERON:0007023!1.95e-07!51;UBERON:0003101!3.50e-07!16;UBERON:0000079!3.50e-07!16;UBERON:0003135!4.19e-07!15;UBERON:0000480!6.00e-07!308;UBERON:0000467!6.00e-07!308;UBERON:0001048!7.31e-07!147 | |ontology_enrichment_uberon=UBERON:0000466!2.99e-13!79;UBERON:0000062!5.98e-12!269;UBERON:0002365!8.53e-09!25;UBERON:0002330!8.53e-09!25;UBERON:0002107!1.66e-08!22;UBERON:0007499!1.66e-08!22;UBERON:0006925!1.66e-08!22;UBERON:0009497!1.66e-08!22;UBERON:0000015!1.66e-08!22;UBERON:0002423!1.66e-08!22;UBERON:0006235!1.66e-08!22;UBERON:0008835!1.66e-08!22;UBERON:0003894!1.66e-08!22;UBERON:0004161!1.66e-08!22;UBERON:0008836!1.66e-08!22;UBERON:0003886!2.85e-08!38;UBERON:0005177!6.82e-08!85;UBERON:0009854!8.49e-08!23;UBERON:0009856!8.49e-08!23;UBERON:0002553!8.75e-08!39;UBERON:0002323!1.21e-07!37;UBERON:0004458!1.21e-07!37;UBERON:0007023!1.95e-07!51;UBERON:0003101!3.50e-07!16;UBERON:0000079!3.50e-07!16;UBERON:0003135!4.19e-07!15;UBERON:0000480!6.00e-07!308;UBERON:0000467!6.00e-07!308;UBERON:0001048!7.31e-07!147 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.13e-16,22;UBERON:0007499,6.13e-16,22;UBERON:0006925,6.13e-16,22;UBERON:0009497,6.13e-16,22;UBERON:0000015,6.13e-16,22;UBERON:0002423,6.13e-16,22;UBERON:0006235,6.13e-16,22;UBERON:0008835,6.13e-16,22;UBERON:0003894,6.13e-16,22;UBERON:0004161,6.13e-16,22;UBERON:0008836,6.13e-16,22;UBERON:0009854,4.05e-15,23;UBERON:0009856,4.05e-15,23;UBERON:0002365,1.12e-13,25;UBERON:0002330,1.12e-13,25;UBERON:0005177,4.88e-10,79;UBERON:0009569,2.98e-09,66;UBERON:0005172,3.94e-09,49;UBERON:0005173,3.94e-09,49;UBERON:0002417,3.94e-09,49;UBERON:0000916,3.94e-09,49;UBERON:0003126,5.06e-09,3;UBERON:0001005,5.06e-09,3;UBERON:0007196,5.06e-09,3;UBERON:0001558,5.06e-09,3;UBERON:0005256,5.63e-09,45;UBERON:0003914,1.88e-08,47;UBERON:0002100,3.37e-08,90;UBERON:0003104,8.88e-07,61;UBERON:0009142,8.88e-07,61;UBERON:0001041,9.21e-07,80 | |||
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|phase1_expression=0.480446541314382,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.47997726838022,1.60586496747019,0,0.430761996159075,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0.218025156380447,0.878744730937887,2.3331587888914,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0,0,0,0.677689064138264,0,0,0,0,1.79760066311043,1.53687322128622,0,0,0,0.285650984403804,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0.255374676170375,0.307213066512487,0,0,0,0.558365998002762,0.56276261003168,1.22238598221448,0,0.142371680799103,0,0,0,4.34796733052517,1.72084775396277,17.6792546764015,2.15881276655127,1.29955283489534,1.79210754838934,0.421333260395256,0,0,0,2.53518155598025,0,0,0,14.2884087067401,11.1478340809043,13.6491600153991,1.37020655662872,1.29468941823586,0.29688427812965,0,0,0,0,0.23517741427141,0.125666591329675,0.988779870937496,0,0.884610551949874,0,0,0,0,0.292780797011547,3.14170060220183,0.255457055208591,0,0,0.127070227073065,0.149790639404823,0.915001205637253,0,0.695297280769106,0.255715457330331,0.41557608911912,0.324482526135515,0.101839363850316,1.99051152976149,23.2504937758981,0,0,0,0,0,0,0.12811372028485,0.281105173679186,0,0.215567992932842,0,0.175951124163949,0,0,0,0,0,0,0.257347907114715,0,0.207125772535502,0,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0.233530684734339,0.16455984991348,0.164167464079095,0.162137619091711,0.292399974850665,0.219550115291051,0.402619256281115,0.630869845692382,0.102904612379284,0.330418782983798,0,0,0,0,0,0,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0,0.193952487167626,0.350679099451593,0.0632365371242573,0.147610147979602,0.156998727841375,0.493588655687202,1.77871576252289,0,0,0,0.405720242777006,0,0.25462585178142,0.575392274901621,1.29708181420028,0.823684239564244,1.43768206527355,1.11642284300551,0.936113019343682,1.26289438973556,1.4351793081753,4.3419916922703,0.184753190166605,0,0.162964976442026,0,0,0,0,0,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0.983528546038072,0.827810238914197,0,0.234423373184406,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,1.13552068166615,0.178065603667255,0,0.329940245945071,3.98235415019888,0.242780636154981,0.302323556964751,0.943025398779491,0.590603785761546,0.614870295887855,0,0.727067458955011,1.06949213515416,0.316036757935816,0,1.03135543248187,1.02131881726136,0,0,0,0,0,0,0.304464949114599,0,0,0.220528398054962,0,0.161464426695906,0,0,0,0.582961673259701,0.18542530201051,1.02522528478712,0,0,0.188368457004691,0,0.228778173206523,0,0,0,4.77335309007557,0,0.203319467126849,0.216010681643603,0.209088296014469,0.436725127492355,0.269728692769641,0.165306911450672,1.04702376793612,0,0,0.56369293868419,0.149516546043979,0.827292452285488,0.194451188344048,0.645799117388655,0.844780627453891,0.938857909166032,0.2604087696879,4.8235298435827,0.966336483304024,0.576060012515731,0.316011120628178,0.405450430580328,0,0,0,0,0,0.147689527174577,0,0,0,0,0.192423683280659,0,0,0.221985953374065,0,0,0.19318959403219,0.187682475451182,0,0,0.501572104035363,0,1.38097570952153,0,0.171853182343688,0,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,1.55328093525546,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0.231768651889711,0.192909220463705,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr14:66599709..66599729,+ | |short_description=p@chr14:66599709..66599729,+ | ||
}} | }} |
Latest revision as of 16:25, 4 August 2015
Short description: | p@chr14:66599709..66599729, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:66599709..66599729, + |
Coexpression cluster: | MCL_coexpression_mm9:290 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.30e-13 | 5 |
duct epithelial cell | 5.06e-09 | 3 |
epithelial cell of tracheobronchial tree | 5.06e-09 | 3 |
branched duct epithelial cell | 5.06e-09 | 3 |
epithelial cell of lower respiratory tract | 5.06e-09 | 3 |
respiratory epithelial cell | 5.06e-09 | 3 |
tracheal epithelial cell | 5.06e-09 | 3 |
tracheoblast | 5.06e-09 | 3 |
endodermal cell | 3.51e-07 | 20 |
epithelial cell | 6.20e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
liver | 6.13e-16 | 22 |
epithelial sac | 6.13e-16 | 22 |
digestive gland | 6.13e-16 | 22 |
epithelium of foregut-midgut junction | 6.13e-16 | 22 |
anatomical boundary | 6.13e-16 | 22 |
hepatobiliary system | 6.13e-16 | 22 |
foregut-midgut junction | 6.13e-16 | 22 |
hepatic diverticulum | 6.13e-16 | 22 |
liver primordium | 6.13e-16 | 22 |
septum transversum | 6.13e-16 | 22 |
liver bud | 6.13e-16 | 22 |
digestive tract diverticulum | 4.05e-15 | 23 |
sac | 4.05e-15 | 23 |
exocrine gland | 1.12e-13 | 25 |
exocrine system | 1.12e-13 | 25 |
trunk region element | 4.88e-10 | 79 |
subdivision of trunk | 2.98e-09 | 66 |
abdomen element | 3.94e-09 | 49 |
abdominal segment element | 3.94e-09 | 49 |
abdominal segment of trunk | 3.94e-09 | 49 |
abdomen | 3.94e-09 | 49 |
trachea | 5.06e-09 | 3 |
respiratory airway | 5.06e-09 | 3 |
tracheobronchial tree | 5.06e-09 | 3 |
lower respiratory tract | 5.06e-09 | 3 |
trunk mesenchyme | 5.63e-09 | 45 |
epithelial tube | 1.88e-08 | 47 |
trunk | 3.37e-08 | 90 |
mesenchyme | 8.88e-07 | 61 |
entire embryonic mesenchyme | 8.88e-07 | 61 |
foregut | 9.21e-07 | 80 |