FFCP PHASE1:Mm9::chr10:75573701..75573707,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=64454|HGNC=|MCL_coexpression_id=1529|UniProt=Q91ZP4|association_with_transcript=0bp_to_ENSMUST00000120757_5end|description=CAGE_peak_1_at_Slc5a4b_5end|id=chr10:75573701..75573707,-|ontology_enrichment_celltype=CL:0002563!1.61e-13!9;CL:0002251!1.61e-13!9;CL:0000239!2.05e-12!6;CL:0000677!2.05e-12!6;CL:0000212!2.05e-12!6;CL:0000584!2.05e-12!6;CL:0000075!1.64e-10!7;CL:0000066!8.39e-08!25;CL:0002076!1.72e-07!15;CL:0000473!3.56e-07!3;CL:0000627!3.56e-07!3;CL:0000682!3.56e-07!3|ontology_enrichment_celltype_v019_2=CL:0000682,2.12e-12,3;CL:0000239,6.31e-11,6;CL:0000677,6.31e-11,6;CL:0000584,6.31e-11,6;CL:0002563,9.74e-11,9;CL:0002251,9.74e-11,9;CL:0000075,2.22e-09,7;CL:0000066,5.85e-09,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.56e-24!15;UBERON:0000160!6.08e-22!43;UBERON:0001242!6.50e-21!13;UBERON:0000060!6.50e-21!13;UBERON:0001262!6.50e-21!13;UBERON:0004786!6.50e-21!13;UBERON:0005409!2.98e-14!59;UBERON:0004923!5.90e-14!24;UBERON:0003350!1.61e-13!9;UBERON:0004808!1.61e-13!9;UBERON:0001277!1.61e-13!9;UBERON:0000485!8.96e-11!11;UBERON:0001007!1.03e-07!128;UBERON:0001555!1.03e-07!128;UBERON:0007026!1.03e-07!128;UBERON:0004119!1.77e-07!130;UBERON:0000925!1.77e-07!130;UBERON:0006595!1.77e-07!130;UBERON:0000331!3.73e-07!3;UBERON:0002116!3.73e-07!3;UBERON:0001204!3.73e-07!3;UBERON:0001168!3.73e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.30e-30,31;UBERON:0000344,1.07e-24,15;UBERON:0005409,8.97e-19,47;UBERON:0001242,1.37e-18,13;UBERON:0001262,1.37e-18,13;UBERON:0004786,1.37e-18,13;UBERON:0004923,7.84e-15,24;UBERON:0003350,9.74e-11,9;UBERON:0004808,9.74e-11,9;UBERON:0001277,9.74e-11,9;UBERON:0002108,1.11e-09,4;UBERON:0000485,9.55e-09,11;UBERON:0001962,1.75e-08,2;UBERON:0001961,1.75e-08,2;UBERON:0001744,1.75e-08,2;UBERON:0001007,7.48e-08,116;UBERON:0001555,7.48e-08,116;UBERON:0007026,7.48e-08,116;UBERON:0004119,1.16e-07,118;UBERON:0000925,1.16e-07,118;UBERON:0006595,1.16e-07,118|phase1_expression=0,17.0997949743287,11.3749809847384,72.893874924946,92.1648143101279,0.839396359559449,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7993938234725,14.4527847072317,25.8404383851759,26.2764817657036,14.8675150553263,39.7148946663821,112.657468002689,0.443461021310609,0,0,0,0,1.32987716286794,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.89866564553358,0,0,0,0,0,0,0,0,0,0,14.2729849648825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.5303588948286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1642894130603,9.78467096655114,0,0,0,0.403367049246685,0.22237804384487,0.190225626112559,42.707615539006,3.29397909448022,0.251335208800269,0,0,26.9645822596266,55.3313407679217,74.4788361971333,0.189667900953082,0.228497025219458,0,0,0,0.0701358198903186,0.126473074248515,0,0.470996183524124,0,0,0,0.393117990226406,0.224862112384854,0.405720242777006,0.482354319504834,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0,0,0,0,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Slc5a4b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:64454 | |||
|HGNC= | |||
|MCL_coexpression_id=1529 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q91ZP4 | |||
|association_with_transcript=0bp_to_ENSMUST00000120757_5end | |||
|cluster_id=chr10:75573701..75573707,- | |||
|description=CAGE_peak_1_at_Slc5a4b_5end | |||
|id=chr10:75573701..75573707,- | |||
|ontology_enrichment_celltype=CL:0002563!1.61e-13!9;CL:0002251!1.61e-13!9;CL:0000239!2.05e-12!6;CL:0000677!2.05e-12!6;CL:0000212!2.05e-12!6;CL:0000584!2.05e-12!6;CL:0000075!1.64e-10!7;CL:0000066!8.39e-08!25;CL:0002076!1.72e-07!15;CL:0000473!3.56e-07!3;CL:0000627!3.56e-07!3;CL:0000682!3.56e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.12e-12,3;CL:0000239,6.31e-11,6;CL:0000677,6.31e-11,6;CL:0000584,6.31e-11,6;CL:0002563,9.74e-11,9;CL:0002251,9.74e-11,9;CL:0000075,2.22e-09,7;CL:0000066,5.85e-09,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.56e-24!15;UBERON:0000160!6.08e-22!43;UBERON:0001242!6.50e-21!13;UBERON:0000060!6.50e-21!13;UBERON:0001262!6.50e-21!13;UBERON:0004786!6.50e-21!13;UBERON:0005409!2.98e-14!59;UBERON:0004923!5.90e-14!24;UBERON:0003350!1.61e-13!9;UBERON:0004808!1.61e-13!9;UBERON:0001277!1.61e-13!9;UBERON:0000485!8.96e-11!11;UBERON:0001007!1.03e-07!128;UBERON:0001555!1.03e-07!128;UBERON:0007026!1.03e-07!128;UBERON:0004119!1.77e-07!130;UBERON:0000925!1.77e-07!130;UBERON:0006595!1.77e-07!130;UBERON:0000331!3.73e-07!3;UBERON:0002116!3.73e-07!3;UBERON:0001204!3.73e-07!3;UBERON:0001168!3.73e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.30e-30,31;UBERON:0000344,1.07e-24,15;UBERON:0005409,8.97e-19,47;UBERON:0001242,1.37e-18,13;UBERON:0001262,1.37e-18,13;UBERON:0004786,1.37e-18,13;UBERON:0004923,7.84e-15,24;UBERON:0003350,9.74e-11,9;UBERON:0004808,9.74e-11,9;UBERON:0001277,9.74e-11,9;UBERON:0002108,1.11e-09,4;UBERON:0000485,9.55e-09,11;UBERON:0001962,1.75e-08,2;UBERON:0001961,1.75e-08,2;UBERON:0001744,1.75e-08,2;UBERON:0001007,7.48e-08,116;UBERON:0001555,7.48e-08,116;UBERON:0007026,7.48e-08,116;UBERON:0004119,1.16e-07,118;UBERON:0000925,1.16e-07,118;UBERON:0006595,1.16e-07,118 | |||
|phase1_expression=0,17.0997949743287,11.3749809847384,72.893874924946,92.1648143101279,0.839396359559449,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7993938234725,14.4527847072317,25.8404383851759,26.2764817657036,14.8675150553263,39.7148946663821,112.657468002689,0.443461021310609,0,0,0,0,1.32987716286794,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.89866564553358,0,0,0,0,0,0,0,0,0,0,14.2729849648825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.5303588948286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1642894130603,9.78467096655114,0,0,0,0.403367049246685,0.22237804384487,0.190225626112559,42.707615539006,3.29397909448022,0.251335208800269,0,0,26.9645822596266,55.3313407679217,74.4788361971333,0.189667900953082,0.228497025219458,0,0,0,0.0701358198903186,0.126473074248515,0,0.470996183524124,0,0,0,0.393117990226406,0.224862112384854,0.405720242777006,0.482354319504834,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0,0,0,0,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Slc5a4b | |||
}} |
Revision as of 17:08, 4 August 2015
Short description: | p1@Slc5a4b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc5a4b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1529 |
Association with transcript: | 0bp_to_ENSMUST00000120757_5end |
EntrezGene: | 64454 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.12e-12 | 3 |
brush border epithelial cell | 6.31e-11 | 6 |
gut absorptive cell | 6.31e-11 | 6 |
enterocyte | 6.31e-11 | 6 |
intestinal epithelial cell | 9.74e-11 | 9 |
epithelial cell of alimentary canal | 9.74e-11 | 9 |
columnar/cuboidal epithelial cell | 2.22e-09 | 7 |
epithelial cell | 5.85e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.30e-30 | 31 |
mucosa | 1.07e-24 | 15 |
gastrointestinal system | 8.97e-19 | 47 |
intestinal mucosa | 1.37e-18 | 13 |
wall of intestine | 1.37e-18 | 13 |
gastrointestinal system mucosa | 1.37e-18 | 13 |
organ component layer | 7.84e-15 | 24 |
epithelium of mucosa | 9.74e-11 | 9 |
gastrointestinal system epithelium | 9.74e-11 | 9 |
intestinal epithelium | 9.74e-11 | 9 |
small intestine | 1.11e-09 | 4 |
simple columnar epithelium | 9.55e-09 | 11 |
gut-associated lymphoid tissue | 1.75e-08 | 2 |
mucosa-associated lymphoid tissue | 1.75e-08 | 2 |
lymphoid tissue | 1.75e-08 | 2 |
digestive system | 7.48e-08 | 116 |
digestive tract | 7.48e-08 | 116 |
primitive gut | 7.48e-08 | 116 |
endoderm-derived structure | 1.16e-07 | 118 |
endoderm | 1.16e-07 | 118 |
presumptive endoderm | 1.16e-07 | 118 |