FFCP PHASE1:Mm9::chr10:76548134..76548143,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=5 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:76548134..76548143,- | |||
|description=CAGE_peak_at_chr10:76548134..76548143,- | |description=CAGE_peak_at_chr10:76548134..76548143,- | ||
|id=chr10:76548134..76548143,- | |id=chr10:76548134..76548143,- | ||
|ontology_enrichment_celltype=CL:0000221!5.13e-09!44;CL:0000133!5.13e-09!44;CL:0000055!5.28e-09!50;CL:0000107!1.08e-08!9;CL:0002319!1.96e-08!43;CL:0002321!2.40e-08!70;CL:0000220!2.40e-08!70;CL:0000333!2.17e-07!10;CL:0000095!2.17e-07!10;CL:0000243!2.17e-07!10;CL:0000123!2.17e-07!10;CL:0000125!2.17e-07!10;CL:0000030!2.17e-07!10;CL:0000339!2.17e-07!10 | |ontology_enrichment_celltype=CL:0000221!5.13e-09!44;CL:0000133!5.13e-09!44;CL:0000055!5.28e-09!50;CL:0000107!1.08e-08!9;CL:0002319!1.96e-08!43;CL:0002321!2.40e-08!70;CL:0000220!2.40e-08!70;CL:0000333!2.17e-07!10;CL:0000095!2.17e-07!10;CL:0000243!2.17e-07!10;CL:0000123!2.17e-07!10;CL:0000125!2.17e-07!10;CL:0000030!2.17e-07!10;CL:0000339!2.17e-07!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000107,5.40e-29,9;CL:0000221,7.25e-12,44;CL:0000133,7.25e-12,44;CL:0002321,2.83e-11,70;CL:0002319,3.31e-10,43;CL:0000182,1.03e-08,5;CL:0000540,3.62e-07,33;CL:0000047,3.62e-07,33;CL:0000031,3.62e-07,33;CL:0000404,3.62e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!1.39e-09!11;UBERON:0002107!2.38e-09!22;UBERON:0007499!2.38e-09!22;UBERON:0006925!2.38e-09!22;UBERON:0009497!2.38e-09!22;UBERON:0000015!2.38e-09!22;UBERON:0002423!2.38e-09!22;UBERON:0006235!2.38e-09!22;UBERON:0008835!2.38e-09!22;UBERON:0003894!2.38e-09!22;UBERON:0004161!2.38e-09!22;UBERON:0008836!2.38e-09!22;UBERON:0002410!1.08e-08!9;UBERON:0009854!1.26e-08!23;UBERON:0009856!1.26e-08!23;UBERON:0002365!1.68e-08!25;UBERON:0002330!1.68e-08!25;UBERON:0003914!1.33e-07!47 | |ontology_enrichment_uberon=UBERON:0000010!1.39e-09!11;UBERON:0002107!2.38e-09!22;UBERON:0007499!2.38e-09!22;UBERON:0006925!2.38e-09!22;UBERON:0009497!2.38e-09!22;UBERON:0000015!2.38e-09!22;UBERON:0002423!2.38e-09!22;UBERON:0006235!2.38e-09!22;UBERON:0008835!2.38e-09!22;UBERON:0003894!2.38e-09!22;UBERON:0004161!2.38e-09!22;UBERON:0008836!2.38e-09!22;UBERON:0002410!1.08e-08!9;UBERON:0009854!1.26e-08!23;UBERON:0009856!1.26e-08!23;UBERON:0002365!1.68e-08!25;UBERON:0002330!1.68e-08!25;UBERON:0003914!1.33e-07!47 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,5.40e-29,9;UBERON:0000010,1.49e-23,11;UBERON:0000011,1.60e-13,3;UBERON:0010313,2.15e-13,3;UBERON:0002342,2.15e-13,3;UBERON:0002005,2.15e-13,3;UBERON:0005428,2.15e-13,3;UBERON:0005062,2.15e-13,3;UBERON:0002107,5.25e-09,22;UBERON:0007499,5.25e-09,22;UBERON:0006925,5.25e-09,22;UBERON:0009497,5.25e-09,22;UBERON:0000015,5.25e-09,22;UBERON:0002423,5.25e-09,22;UBERON:0006235,5.25e-09,22;UBERON:0008835,5.25e-09,22;UBERON:0003894,5.25e-09,22;UBERON:0004161,5.25e-09,22;UBERON:0008836,5.25e-09,22;UBERON:0009854,1.40e-08,23;UBERON:0009856,1.40e-08,23;UBERON:0002365,7.93e-08,25;UBERON:0002330,7.93e-08,25 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,1.56478268869608,0.65407546914134,0.439372365468944,0.777719596297134,0.279972843250725,1.43752564364972,0,0,0,0.257259436035947,0.286533439938757,0,0.202316460859598,0,0,1.0165335962074,0,0,0,0,4.19440154725767,0.384218305321555,0.103689612308478,0.405017814995072,0,0.285650984403804,0.441737081903227,0.122490799214954,0,0,0,0,0,0,0.182975287204819,0.52091337055676,0,0,0,0,0.284743361598206,0.372798891650601,0.37863096666592,0.453429360640713,0.289864488701678,0.860423876981386,0.679971333707751,4.85732872474035,3.24888208723835,1.79210754838934,0.280888840263504,0,0,0,1.12674735821344,0,0,0,0,0.253359865475099,0.505524445014783,0.22836775943812,0,0.29688427812965,0.173485326766136,0.608930956624282,0,0,0.23517741427141,0,0.741584903203122,0.289198713839823,0,0.161766849947409,0,0,0,0,0.41889341362691,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260240885925407,0,0.180062129805349,0,0,0,0.187403449119458,0,0.431135985865684,0.189106080167819,0,0.219195732427575,0.278047249225598,0,0,0.199034266818493,0,0,0,0.207125772535502,0.703578179943289,0.180062061461015,0.473489471170421,0.196764231747404,0.308534225774757,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0.949058123089023,0,0,0,0,0,0,0,0.758671603812327,0,2.25415471346161,0,0,0,0.189709611372772,0,0.31399745568275,0.246794327843601,0.296452627087149,0,0.393117990226406,0.899448449539415,0,0.482354319504834,0.25462585178142,0,1.78348749452539,1.09824565275233,25.8782771749238,1.48856379067401,0.936113019343682,0,0.538192240565737,0.482443521363367,0,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,1.26203287766503,1.95219372148319,1.72338718186239,2.15071918157297,2.00518806674155,1.13230612315533,1.21443210502468,1.16902343164525,0.790575555893047,0,0.141940085208269,0,0.488660878060728,0.164970122972535,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0.775284879504663,0,0.712994756769443,0,0,0,0,0.36012218806262,0.646793418913773,0.857348140126369,0.532020700926821,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0.448549638131936,0.165458490457098,0.194451188344048,0.387479470433193,0.168956125490778,0.234714477291508,0.13020438484395,0.419437377702843,0,0,0,0,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0,0,0,0,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0,0,0.25384382367503,0,0,0,0.561142271657738,0,0,0,0,0.192906610981141,0,0.233931608445408,0.644613162144895,0.191288332068843,0,0 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|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,1.56478268869608,0.65407546914134,0.439372365468944,0.777719596297134,0.279972843250725,1.43752564364972,0,0,0,0.257259436035947,0.286533439938757,0,0.202316460859598,0,0,1.0165335962074,0,0,0,0,4.19440154725767,0.384218305321555,0.103689612308478,0.405017814995072,0,0.285650984403804,0.441737081903227,0.122490799214954,0,0,0,0,0,0,0.182975287204819,0.52091337055676,0,0,0,0,0.284743361598206,0.372798891650601,0.37863096666592,0.453429360640713,0.289864488701678,0.860423876981386,0.679971333707751,4.85732872474035,3.24888208723835,1.79210754838934,0.280888840263504,0,0,0,1.12674735821344,0,0,0,0,0.253359865475099,0.505524445014783,0.22836775943812,0,0.29688427812965,0.173485326766136,0.608930956624282,0,0,0.23517741427141,0,0.741584903203122,0.289198713839823,0,0.161766849947409,0,0,0,0,0.41889341362691,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260240885925407,0,0.180062129805349,0,0,0,0.187403449119458,0,0.431135985865684,0.189106080167819,0,0.219195732427575,0.278047249225598,0,0,0.199034266818493,0,0,0,0.207125772535502,0.703578179943289,0.180062061461015,0.473489471170421,0.196764231747404,0.308534225774757,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0.949058123089023,0,0,0,0,0,0,0,0.758671603812327,0,2.25415471346161,0,0,0,0.189709611372772,0,0.31399745568275,0.246794327843601,0.296452627087149,0,0.393117990226406,0.899448449539415,0,0.482354319504834,0.25462585178142,0,1.78348749452539,1.09824565275233,25.8782771749238,1.48856379067401,0.936113019343682,0,0.538192240565737,0.482443521363367,0,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,1.26203287766503,1.95219372148319,1.72338718186239,2.15071918157297,2.00518806674155,1.13230612315533,1.21443210502468,1.16902343164525,0.790575555893047,0,0.141940085208269,0,0.488660878060728,0.164970122972535,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0.775284879504663,0,0.712994756769443,0,0,0,0,0.36012218806262,0.646793418913773,0.857348140126369,0.532020700926821,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0.448549638131936,0.165458490457098,0.194451188344048,0.387479470433193,0.168956125490778,0.234714477291508,0.13020438484395,0.419437377702843,0,0,0,0,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0,0,0,0,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0,0,0.25384382367503,0,0,0,0.561142271657738,0,0,0,0,0.192906610981141,0,0.233931608445408,0.644613162144895,0.191288332068843,0,0 | ||
|short_description=p@chr10:76548134..76548143,- | |short_description=p@chr10:76548134..76548143,- | ||
}} | }} |
Latest revision as of 17:35, 4 August 2015
Short description: | p@chr10:76548134..76548143, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:76548134..76548143, - |
Coexpression cluster: | MCL_coexpression_mm9:5 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 5.40e-29 | 9 |
ectodermal cell | 7.25e-12 | 44 |
neurectodermal cell | 7.25e-12 | 44 |
embryonic cell | 2.83e-11 | 70 |
neural cell | 3.31e-10 | 43 |
hepatocyte | 1.03e-08 | 5 |
neuron | 3.62e-07 | 33 |
neuronal stem cell | 3.62e-07 | 33 |
neuroblast | 3.62e-07 | 33 |
electrically signaling cell | 3.62e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 5.40e-29 | 9 |
peripheral nervous system | 1.49e-23 | 11 |
parasympathetic nervous system | 1.60e-13 | 3 |
neural crest-derived structure | 2.15e-13 | 3 |
neural crest | 2.15e-13 | 3 |
enteric nervous system | 2.15e-13 | 3 |
vagal neural crest | 2.15e-13 | 3 |
neural fold | 2.15e-13 | 3 |
liver | 5.25e-09 | 22 |
epithelial sac | 5.25e-09 | 22 |
digestive gland | 5.25e-09 | 22 |
epithelium of foregut-midgut junction | 5.25e-09 | 22 |
anatomical boundary | 5.25e-09 | 22 |
hepatobiliary system | 5.25e-09 | 22 |
foregut-midgut junction | 5.25e-09 | 22 |
hepatic diverticulum | 5.25e-09 | 22 |
liver primordium | 5.25e-09 | 22 |
septum transversum | 5.25e-09 | 22 |
liver bud | 5.25e-09 | 22 |
digestive tract diverticulum | 1.40e-08 | 23 |
sac | 1.40e-08 | 23 |
exocrine gland | 7.93e-08 | 25 |
exocrine system | 7.93e-08 | 25 |