Personal tools

FFCP PHASE1:Mm9::chr4:125879579..125879645,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=230753|HGNC=|UniProt=E9Q6C5,A2AJI7|association_with_transcript=0bp_to_ENSMUST00000106141,ENSMUST00000142125_5end|description=CAGE_peak_2_at_Thrap3_5end|id=chr4:125879579..125879645,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003886!2.81e-07!38;UBERON:0002323!7.71e-07!37;UBERON:0004458!7.71e-07!37;UBERON:0000466!9.11e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0005177,7.43e-09,79;UBERON:0002100,3.97e-08,90;UBERON:0003886,2.77e-07,38;UBERON:0002323,7.61e-07,37;UBERON:0004458,7.61e-07,37|phase1_expression=2.24208385946712,0.348975407639361,1.81999695755814,1.81478526784098,2.00358291978539,1.00727563147134,1.16806320297763,1.29123323441576,1.54867594366833,0.234064526321993,1.02730780935303,0.717949430958028,3.0816131387617,1.66098764596095,1.33243904726265,1.61980213911861,2.79824751251259,1.41957974411207,1.7824876368746,1.69755860719212,3.57181818634493,3.97163804803541,3.91799683708403,2.55987876469451,0.91763712426868,0.57423196411502,1.29228598847722,1.29282739611533,1.33016393619462,0.504060259519861,0.886922042621219,3.81018404075779,3.07532393792285,0,3.46621943701529,2.99222361645286,2.85837098767317,2.51118978442145,3.1253413780952,3.14114246384279,2.94115744015507,3.41522742479223,0.971020706062307,2.51793635951155,2.73717714292689,1.28482726513177,3.12956537739216,1.52617609466313,4.83309602015838,4.27745777963423,4.33957907038624,1.43752564364972,1.17447824240415,1.45072428402269,1.68046899571232,1.02903774414379,6.87680255853016,2.57836046138721,0.202316460859598,0,1.26766280701236,1.35537812827653,2.66788438833342,2.2497492932035,0,0,2.99600110518405,2.30530983192933,0.725827286159344,0.405017814995072,0.420649922702764,0,0.883474163806454,0.244981598429908,0.287536413054709,1.83843757322004,2.20231761998777,1.40456071893706,1.22885226604995,0.923204014111357,0.731901148819277,2.08365348222704,2.51264699101243,2.8138130501584,1.98637722109853,0.589257170947335,0.711858403995515,0.745597783301202,0.984440513331393,1.66257432234928,5.2175607966302,0.860423876981386,0.679971333707751,7.01614149129162,12.9955283489534,6.2723764193627,3.7919993435573,1.53387290320252,1.55871602761721,2.47337702157238,1.54927761754349,0,2.54805239706646,7.11066703153331,2.16491041011214,2.28023878927589,2.52762222507392,3.4255163915718,7.50919862576798,4.45326417194474,2.4287945747259,6.69824052286711,5.30415643688935,4.22023393547343,3.52766121407114,5.15233024451669,5.93267922562497,11.423349196673,1.76922110389975,3.39710384889559,3.3126227769059,4.363877278217,5.59175283654366,2.04946557908083,4.1889341362691,3.57639877292028,2.99537811264801,1.79970819298022,1.52484272487678,3.44518470631092,1.37250180845588,1.50785222535437,2.08589184230732,2.55715457330331,2.90903262383384,3.73154905055843,3.36069900706044,4.47865094196335,6.57079171927554,5.6819301089348,2.21204753036596,0.919608417733892,1.44049703844279,3.16480117455002,1.56483948048054,1.92170580427275,2.99845518591132,1.81092359517311,2.80238390812695,3.02569728268511,4.57472922826267,5.2606975782618,3.89266148915837,6.268538997399,5.76189981942242,5.57295947091781,0,0.51469581422943,0.852490498186778,1.86413195281952,1.40715635988658,1.98068267607116,4.26140524053378,4.52557733019029,2.62254091908543,3.25547522650571,1.87791380979733,3.15266424391358,2.13927804887525,2.95501435342371,3.08061476274252,3.07019973593198,3.29325172936576,2.95254121272818,2.73376933133365,1.02904612379284,5.61711931072457,4.49565963328025,3.41261200856374,4.64473343720877,3.73715637834071,5.44545516483025,5.11469500843202,3.99473814836374,3.32170343081158,2.9645811850322,3.51869292320377,2.58643413653496,3.11942539390592,3.59527763461689,2.59365659849633,3.98282546508734,2.84501851429623,3.31320686568214,7.88954149711563,5.90588850751411,4.26695471768777,2.45475369616115,4.99568643281633,4.72352473534727,5.33795674660674,4.07210640941942,3.55743152504579,2.8363667971736,3.93117990226406,2.9232074610031,4.66578279193557,3.85883455603867,4.07401362850272,5.75392274901621,3.89124544260085,4.11842119782122,2.87536413054709,6.32639611036456,3.74445207737473,3.03094653536534,5.38192240565737,6.75420929908714,2.58654466233247,4.16881105895066,2.60743962307241,2.8856664581782,3.75504397261603,3.35012514883632,5.2369600994923,2.92700471786698,5.35959489961049,2.6575762757853,2.39182152986231,3.27726629431476,3.10832967358612,5.78596234326046,0,1.63171705145613,1.47529281905711,7.17435540392304,3.53211297973142,3.04750385139728,2.13115428989678,1.51482556322624,4.73262329124385,1.95219372148319,2.36965737506079,5.4962823529087,3.11918143715352,3.67999490025482,3.64329631507405,3.50707029493574,2.37172666767914,1.92792789853084,6.38730383437209,5.1639025063504,3.74640006513225,9.23832688646199,11.9470624505967,4.37005145078967,6.34879469625977,7.54420319023592,7.67784921490009,7.99331384654211,2.58428293168221,6.90714086007261,4.27796854061666,9.48110273807448,10.5418608574999,7.21948802737308,10.2131881726136,3.42116078659489,4.78627129996192,5.78709994585299,12.4138163549592,6.59964625127661,7.89835298890181,3.65357938937519,5.16277757740163,6.35496212591461,6.17479514553893,5.11147384118588,5.16686165426898,4.52346936961169,3.9392873521035,1.96969079694074,3.78925087618806,3.8939313422207,5.46786818553129,4.54051109519089,4.07427960213366,5.08594833912666,3.00727300986255,1.60144721244566,2.54967644990783,1.95932033253121,1.10559979043539,4.77335309007557,4.11236791655476,4.26970880966382,4.21220829205025,3.97267762427491,5.24070152990826,5.52943820177765,3.55409859618945,2.6175594198403,4.66613903850454,1.24267862617385,2.25477175473676,4.78452947340732,3.14371131868485,4.27792614356905,2.97067593998782,4.39285926276023,3.87278887530988,4.55715346953825,4.40409246587986,2.65742532908607,2.30424005006292,5.37218905067903,2.63542779877213,4.5192821152524,4.28738715826724,3.40150721768215,2.98022032171897,2.16351809135944,2.21534290761866,4.03865799792591,1.98137697303,3.42809029465258,4.28814675254911,2.50150788264857,4.32444538071805,4.30787728868902,1.55390167361845,0.358855426437903,1.34307693091263,4.82973985080476,6.94425159169373,6.04400360081975,6.21668299329291,8.52672576860118,0,0.920650473014354,0,3.95262319390481,2.05524755931193,0.755393897389701,0.675022500231806,1.35096360967266,0.453142408984205,2.5888015587591,3.1136204275253,1.19707462020309,2.04880326904961,5.34834777550247,4.82110274044359,4.59608771125035,4.88942801163553,4.53277125925567,2.56735367673452,5.30664144703975,3.29523089857312,6.22466926574051,5.15028291084353,5.05798703998467,5.80098236451694,7.1444053692461,3.70829843023538,3.27945674788299,5.35711671044299,4.26876868389752,6.51451579532289,4.2594193478241,5.48403236878838,4.65108533223451,4.70546902076653,6.34609559187574,4.93905526756486,5.78753365163254,5.29636043998861,4.48913817326191,6.16902094245706,5.1222330835293,3.6830793885272,4.49316839439301,5.78719832943424,3.74715866906919,5.84829021113521,3.22306581072447,2.48674831689496,3.08827986767322,2.08681052058379|short_description=p2@Thrap3}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:230753
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:E9Q6C5,uniprot:A2AJI7
|association_with_transcript=0bp_to_ENSMUST00000106141,ENSMUST00000142125_5end
|cluster_id=chr4:125879579..125879645,-
|description=CAGE_peak_2_at_Thrap3_5end
|id=chr4:125879579..125879645,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003886!2.81e-07!38;UBERON:0002323!7.71e-07!37;UBERON:0004458!7.71e-07!37;UBERON:0000466!9.11e-07!79
|ontology_enrichment_uberon_v019_2=UBERON:0005177,7.43e-09,79;UBERON:0002100,3.97e-08,90;UBERON:0003886,2.77e-07,38;UBERON:0002323,7.61e-07,37;UBERON:0004458,7.61e-07,37
|phase1_expression=2.24208385946712,0.348975407639361,1.81999695755814,1.81478526784098,2.00358291978539,1.00727563147134,1.16806320297763,1.29123323441576,1.54867594366833,0.234064526321993,1.02730780935303,0.717949430958028,3.0816131387617,1.66098764596095,1.33243904726265,1.61980213911861,2.79824751251259,1.41957974411207,1.7824876368746,1.69755860719212,3.57181818634493,3.97163804803541,3.91799683708403,2.55987876469451,0.91763712426868,0.57423196411502,1.29228598847722,1.29282739611533,1.33016393619462,0.504060259519861,0.886922042621219,3.81018404075779,3.07532393792285,0,3.46621943701529,2.99222361645286,2.85837098767317,2.51118978442145,3.1253413780952,3.14114246384279,2.94115744015507,3.41522742479223,0.971020706062307,2.51793635951155,2.73717714292689,1.28482726513177,3.12956537739216,1.52617609466313,4.83309602015838,4.27745777963423,4.33957907038624,1.43752564364972,1.17447824240415,1.45072428402269,1.68046899571232,1.02903774414379,6.87680255853016,2.57836046138721,0.202316460859598,0,1.26766280701236,1.35537812827653,2.66788438833342,2.2497492932035,0,0,2.99600110518405,2.30530983192933,0.725827286159344,0.405017814995072,0.420649922702764,0,0.883474163806454,0.244981598429908,0.287536413054709,1.83843757322004,2.20231761998777,1.40456071893706,1.22885226604995,0.923204014111357,0.731901148819277,2.08365348222704,2.51264699101243,2.8138130501584,1.98637722109853,0.589257170947335,0.711858403995515,0.745597783301202,0.984440513331393,1.66257432234928,5.2175607966302,0.860423876981386,0.679971333707751,7.01614149129162,12.9955283489534,6.2723764193627,3.7919993435573,1.53387290320252,1.55871602761721,2.47337702157238,1.54927761754349,0,2.54805239706646,7.11066703153331,2.16491041011214,2.28023878927589,2.52762222507392,3.4255163915718,7.50919862576798,4.45326417194474,2.4287945747259,6.69824052286711,5.30415643688935,4.22023393547343,3.52766121407114,5.15233024451669,5.93267922562497,11.423349196673,1.76922110389975,3.39710384889559,3.3126227769059,4.363877278217,5.59175283654366,2.04946557908083,4.1889341362691,3.57639877292028,2.99537811264801,1.79970819298022,1.52484272487678,3.44518470631092,1.37250180845588,1.50785222535437,2.08589184230732,2.55715457330331,2.90903262383384,3.73154905055843,3.36069900706044,4.47865094196335,6.57079171927554,5.6819301089348,2.21204753036596,0.919608417733892,1.44049703844279,3.16480117455002,1.56483948048054,1.92170580427275,2.99845518591132,1.81092359517311,2.80238390812695,3.02569728268511,4.57472922826267,5.2606975782618,3.89266148915837,6.268538997399,5.76189981942242,5.57295947091781,0,0.51469581422943,0.852490498186778,1.86413195281952,1.40715635988658,1.98068267607116,4.26140524053378,4.52557733019029,2.62254091908543,3.25547522650571,1.87791380979733,3.15266424391358,2.13927804887525,2.95501435342371,3.08061476274252,3.07019973593198,3.29325172936576,2.95254121272818,2.73376933133365,1.02904612379284,5.61711931072457,4.49565963328025,3.41261200856374,4.64473343720877,3.73715637834071,5.44545516483025,5.11469500843202,3.99473814836374,3.32170343081158,2.9645811850322,3.51869292320377,2.58643413653496,3.11942539390592,3.59527763461689,2.59365659849633,3.98282546508734,2.84501851429623,3.31320686568214,7.88954149711563,5.90588850751411,4.26695471768777,2.45475369616115,4.99568643281633,4.72352473534727,5.33795674660674,4.07210640941942,3.55743152504579,2.8363667971736,3.93117990226406,2.9232074610031,4.66578279193557,3.85883455603867,4.07401362850272,5.75392274901621,3.89124544260085,4.11842119782122,2.87536413054709,6.32639611036456,3.74445207737473,3.03094653536534,5.38192240565737,6.75420929908714,2.58654466233247,4.16881105895066,2.60743962307241,2.8856664581782,3.75504397261603,3.35012514883632,5.2369600994923,2.92700471786698,5.35959489961049,2.6575762757853,2.39182152986231,3.27726629431476,3.10832967358612,5.78596234326046,0,1.63171705145613,1.47529281905711,7.17435540392304,3.53211297973142,3.04750385139728,2.13115428989678,1.51482556322624,4.73262329124385,1.95219372148319,2.36965737506079,5.4962823529087,3.11918143715352,3.67999490025482,3.64329631507405,3.50707029493574,2.37172666767914,1.92792789853084,6.38730383437209,5.1639025063504,3.74640006513225,9.23832688646199,11.9470624505967,4.37005145078967,6.34879469625977,7.54420319023592,7.67784921490009,7.99331384654211,2.58428293168221,6.90714086007261,4.27796854061666,9.48110273807448,10.5418608574999,7.21948802737308,10.2131881726136,3.42116078659489,4.78627129996192,5.78709994585299,12.4138163549592,6.59964625127661,7.89835298890181,3.65357938937519,5.16277757740163,6.35496212591461,6.17479514553893,5.11147384118588,5.16686165426898,4.52346936961169,3.9392873521035,1.96969079694074,3.78925087618806,3.8939313422207,5.46786818553129,4.54051109519089,4.07427960213366,5.08594833912666,3.00727300986255,1.60144721244566,2.54967644990783,1.95932033253121,1.10559979043539,4.77335309007557,4.11236791655476,4.26970880966382,4.21220829205025,3.97267762427491,5.24070152990826,5.52943820177765,3.55409859618945,2.6175594198403,4.66613903850454,1.24267862617385,2.25477175473676,4.78452947340732,3.14371131868485,4.27792614356905,2.97067593998782,4.39285926276023,3.87278887530988,4.55715346953825,4.40409246587986,2.65742532908607,2.30424005006292,5.37218905067903,2.63542779877213,4.5192821152524,4.28738715826724,3.40150721768215,2.98022032171897,2.16351809135944,2.21534290761866,4.03865799792591,1.98137697303,3.42809029465258,4.28814675254911,2.50150788264857,4.32444538071805,4.30787728868902,1.55390167361845,0.358855426437903,1.34307693091263,4.82973985080476,6.94425159169373,6.04400360081975,6.21668299329291,8.52672576860118,0,0.920650473014354,0,3.95262319390481,2.05524755931193,0.755393897389701,0.675022500231806,1.35096360967266,0.453142408984205,2.5888015587591,3.1136204275253,1.19707462020309,2.04880326904961,5.34834777550247,4.82110274044359,4.59608771125035,4.88942801163553,4.53277125925567,2.56735367673452,5.30664144703975,3.29523089857312,6.22466926574051,5.15028291084353,5.05798703998467,5.80098236451694,7.1444053692461,3.70829843023538,3.27945674788299,5.35711671044299,4.26876868389752,6.51451579532289,4.2594193478241,5.48403236878838,4.65108533223451,4.70546902076653,6.34609559187574,4.93905526756486,5.78753365163254,5.29636043998861,4.48913817326191,6.16902094245706,5.1222330835293,3.6830793885272,4.49316839439301,5.78719832943424,3.74715866906919,5.84829021113521,3.22306581072447,2.48674831689496,3.08827986767322,2.08681052058379
|short_description=p2@Thrap3
}}

Revision as of 18:07, 4 August 2015

Short description:p2@Thrap3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Thrap3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000106141, ENSMUST00000142125_5end
EntrezGene:230753
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Thrap3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.24
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.08
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.66
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.78
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.97
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.92
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.81
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.47
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.52
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.74
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.83
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.34
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.88
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.98
Mouse Schwann, donor2.CNhs12573.11746-123F91.66
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.22
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.02
Mouse hepatocyte, donor6.CNhs13090.11822-124F413.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.27
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.43
accessory axillary lymph node, adult.CNhs10475.1063-29H97.51
adrenal gland, adult.CNhs10508.49-24D74.45
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D66.70
adrenal gland, embryo E17.CNhs11043.1263-45I15.30
adrenal gland, embryo E18.CNhs11026.1262-18F54.22
adrenal gland, neonate N00.CNhs11191.1311-23C13.53
adrenal gland, neonate N25.CNhs11223.1377-27I35.15
amnion, adult pregnant day17.5.CNhs10488.583-22A85.93
aorta, adult.CNhs10498.46-23H111.42
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F53.40
bone (os femoris), neonate N16.CNhs11225.1525-43A63.31
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H73.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.52
corpora quadrigemina, adult.CNhs10501.16-22A43.45
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B23.73
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.36
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.48
epididymis, adult.CNhs10490.58-23B26.57
eyeball, adult.CNhs10484.31-12G45.68
eyeball, embryo E12.CNhs11016.345-16C62.21
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D43.16
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G83.00
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E24.57
forelimb, embryo E14.CNhs10577.413-26A85.26
forelimb, embryo E15.CNhs11007.437-20E73.89
forelimb, embryo E17.CNhs10598.1517-43C46.27
forelimb, embryo E18.CNhs11008.1520-43B55.76
gonad, embryo E13.CNhs11044.1564-45I65.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D44.26
heart, embryo E15.CNhs11017.431-16C84.53
heart, embryo E16.CNhs11021.457-17C62.62
heart, embryo E17.CNhs11025.479-18E53.26
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E33.15
heart, neonate N03.CNhs11221.1349-25I22.14
heart, neonate N10.CNhs11118.749-24G12.96
heart, neonate N16.CNhs11209.782-15G13.08
heart, neonate N20.CNhs11127.821-26I63.07
heart, neonate N25.CNhs11196.1351-25D33.29
heart, neonate N30.CNhs11202.1390-42D22.95
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I35.62
intestine, adult.CNhs10496.178-9A34.50
intestine, embryo E12.CNhs11019.1251-16I53.41
intestine, embryo E13.CNhs11010.381-16D54.64
intestine, embryo E15.CNhs10602.976-16D83.74
intestine, embryo E16.CNhs10585.463-22H45.45
intestine, embryo E17.CNhs10582.482-18D35.11
intestine, embryo E18.CNhs10526.1289-20F73.99
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E92.96
intestine, neonate N06.CNhs11102.688-20B83.52
intestine, neonate N07.CNhs11095.720-20F22.59
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E32.59
intestine, neonate N30.CNhs11131.1384-42G13.98
kidney, embryo E14.CNhs10606.411-4I92.85
kidney, embryo E15.CNhs10997.434-16F83.31
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I25.91
kidney, embryo E18.CNhs11001.1288-20C74.27
kidney, neonate N00.CNhs11214.646-21G72.45
kidney, neonate N10.CNhs11206.758-6D55.00
kidney, neonate N20.CNhs11113.832-19I14.72
kidney, neonate N25.CNhs11122.1353-25F35.34
kidney, neonate N30.CNhs11203.1385-42H14.07
liver, adult pregnant day01.CNhs10466.508-5B23.56
liver, embryo E12.CNhs10601.355-15F82.84
liver, embryo E13.CNhs10524.378-3H63.93
liver, embryo E14.CNhs10594.409-16E12.92
liver, embryo E15.CNhs10520.433-16D74.67
liver, embryo E16.CNhs10523.462-17F53.86
liver, embryo E17.CNhs10510.481-18A34.07
liver, embryo E18.CNhs10579.499-43G45.75
liver, neonate N00.CNhs11117.641-24F43.89
liver, neonate N03.CNhs11123.1345-25G24.12
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H26.33
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H15.38
liver, neonate N30.CNhs11106.1382-42D16.75
lung, adult.CNhs10474.28-22B12.59
lung, embryo E12.CNhs10522.354-16G24.17
lung, embryo E14.CNhs10604.404-26F82.61
lung, embryo E15.CNhs11020.432-17C52.89
lung, embryo E16.CNhs10998.458-17B63.76
lung, embryo E17.CNhs10605.480-44A63.35
lung, embryo E18.CNhs10583.1287-20I65.24
lung, neonate N00.CNhs11224.640-42C62.93
lung, neonate N06.CNhs11212.683-20E55.36
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E62.39
lung, neonate N20.CNhs11109.822-18A43.28
lung, neonate N25.CNhs11119.1359-25C73.11
lung, neonate N30.CNhs11133.1394-42H25.79
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H27.17
medulla oblongata, adult.CNhs10477.17-12C23.53
medulla oblongata, neonate N30.CNhs11200.1396-42A33.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.13
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.50
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I76.39
ovary, embryo E18.CNhs11040.505-44H75.16
ovary, neonate N00.CNhs11217.1299-22I43.75
oviduct, adult pregnant day01.CNhs10500.988-6G69.24
pancreas, adult.CNhs10486.34-16E411.95
pancreas, embryo E14.CNhs11012.405-44F44.37
pancreas, embryo E15.CNhs11042.1556-45F26.35
pancreas, embryo E16.CNhs11003.460-26E57.54
pancreas, embryo E17.CNhs10599.1558-45G37.68
pancreas, embryo E18.CNhs10580.1535-43I77.99
pancreas, neonate N00.CNhs11105.645-26G92.58
pancreas, neonate N01.CNhs11138.1531-43D76.91
pancreas, neonate N02.CNhs11139.1539-43D84.28
pancreas, neonate N16.CNhs11136.787-43B69.48
pancreas, neonate N25.CNhs11094.1555-45E210.54
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G810.21
pituitary gland, embryo E12.CNhs11018.346-16E63.42
pituitary gland, embryo E13.CNhs11009.370-44C74.79
pituitary gland, embryo E14.CNhs11037.398-44A55.79
pituitary gland, embryo E15.CNhs10592.427-16B912.41
pituitary gland, embryo E16.CNhs11036.449-43F66.60
pituitary gland, embryo E17.CNhs11039.1265-44F57.90
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I75.16
placenta, adult pregnant day17.CNhs10464.577-18G36.35
prostate, adult.CNhs10470.859-1F86.17
skin, adult.CNhs10492.30-1C35.11
skin, neonate N00.CNhs11124.650-25G45.17
skin, neonate N03.CNhs11215.662-22H34.52
skin, neonate N06.CNhs11097.693-20I53.94
skin, neonate N10.CNhs11108.762-6C41.97
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G25.47
spleen, embryo E16.CNhs11035.461-43C14.54
spleen, embryo E18.CNhs11011.1271-21F24.07
spleen, neonate N10.CNhs11116.752-24D15.09
spleen, neonate N20.CNhs11112.824-19H13.01
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E34.11
stomach, embryo E15.CNhs10603.1252-16G84.27
stomach, embryo E16.CNhs11022.459-17D44.21
stomach, embryo E17.CNhs11006.1035-18D53.97
stomach, embryo E18.CNhs10999.1286-20C65.24
stomach, neonate N03.CNhs11193.1340-24B85.53
stomach, neonate N07.CNhs11210.718-18A93.55
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I14.67
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F54.78
testis, embryo E15.CNhs11034.443-27C53.14
testis, embryo E16.CNhs11033.470-26G54.28
testis, embryo E17.CNhs11029.486-18I52.97
testis, embryo E18.CNhs11027.503-18G54.39
testis, neonate N00.CNhs11189.1300-22B73.87
testis, neonate N07.CNhs11222.726-26I44.56
testis, neonate N10.CNhs11204.763-44D94.40
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B55.37
thymus, embryo E14.CNhs11041.402-44I42.64
thymus, embryo E15.CNhs11005.430-45I24.52
thymus, embryo E16.CNhs11002.456-26C54.29
thymus, embryo E17.CNhs10581.478-18C13.40
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F82.16
thymus, neonate N03.CNhs11137.2104-43C72.22
thymus, neonate N06.CNhs11197.681-26C44.04
thymus, neonate N07.CNhs11211.713-19D31.98
thymus, neonate N10.CNhs11194.748-24E43.43
thymus, neonate N20.CNhs11186.820-7A24.29
thymus, neonate N25.CNhs11125.1362-25G72.50
thymus, neonate N30.CNhs11132.1393-42G24.32
tongue, adult.CNhs10499.32-1B44.31
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E44.83
uterus, adult pregnant day19.CNhs10497.590-15F56.94
uterus, adult.CNhs10509.92-27E56.04
vagina, adult.CNhs10502.89-27D56.22
vesicular gland, adult.CNhs10491.51-27F88.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.95
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I83.11
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B14.82
whole body, embryo E16.CNhs10514.453-14F24.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.31
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.51
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.26
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.71
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.49
whole body, embryo E17.5.CNhs10513.490-9F95.79
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B35.85
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk region element7.43e-0979
trunk3.97e-0890
body cavity precursor2.77e-0738
body cavity7.61e-0737
body cavity or lining7.61e-0737
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:125879579..125879645,-&oldid=3807059"