FFCP PHASE1:Mm9::chr12:112658695..112658748,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:112658695..112658748,+|id=chr12:112658695..112658748,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,2.65e-09,6;CL:0000677,2.65e-09,6;CL:0000584,2.65e-09,6;CL:0000075,8.36e-08,7;CL:0002563,1.86e-07,9;CL:0002251,1.86e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.92e-14!43;UBERON:0005409!1.83e-12!59;UBERON:0004923!1.28e-11!24;UBERON:0000344!2.68e-11!15;UBERON:0001242!1.11e-09!13;UBERON:0000060!1.11e-09!13;UBERON:0001262!1.11e-09!13;UBERON:0004786!1.11e-09!13;UBERON:0004119!7.99e-09!130;UBERON:0000925!7.99e-09!130;UBERON:0006595!7.99e-09!130;UBERON:0001007!5.51e-08!128;UBERON:0001555!5.51e-08!128;UBERON:0007026!5.51e-08!128;UBERON:0004921!4.14e-07!126;UBERON:0004185!4.14e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.81e-28,31;UBERON:0005409,6.90e-17,47;UBERON:0000344,5.80e-15,15;UBERON:0001242,1.49e-12,13;UBERON:0001262,1.49e-12,13;UBERON:0004786,1.49e-12,13;UBERON:0004923,9.87e-11,24;UBERON:0004119,1.54e-10,118;UBERON:0000925,1.54e-10,118;UBERON:0006595,1.54e-10,118;UBERON:0001007,2.25e-09,116;UBERON:0001555,2.25e-09,116;UBERON:0007026,2.25e-09,116;UBERON:0004921,3.64e-08,114;UBERON:0003350,1.86e-07,9;UBERON:0004808,1.86e-07,9;UBERON:0001277,1.86e-07,9;UBERON:0002108,7.88e-07,4|phase1_expression=0,90.0356551709552,52.3249125297966,169.682422543132,157.782154933099,3.02182689441402,7.70921713965235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.4387952241517,13.0763290208287,51.6808767703518,37.4762936658395,36.6301095566011,60.997517645496,59.7311407531036,13.082100128663,8.89042942843484,8.61090702618398,15.8481681015439,0,1.49611180822643,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.5111105032938,0,0,0,0,0,0,0,0,0,0,11.5325718516251,0,0,0.346970653532272,0.913396434936424,0,0,0,0.251333182659351,0.741584903203122,0,0,0.323533699894818,0.220841518460394,0,1.86391761218122,0,0.209446706813455,85.5781134948781,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0,0,0,235.919011050432,74.0461586657924,0,0,0.257734922644187,4.43703754171354,10.229390016864,18.6421113590308,88.2624054472792,22.7284557519135,19.604146286421,12.7332142106337,18.3266241891973,82.6913855961884,59.2218256656662,65.5174789006868,0,0.456994050438915,0,0,0.387904974335251,0.0701358198903186,0.126473074248515,0.147610147979602,0.470996183524124,0.740382983530803,0,2.00214126859313,4.12773889737726,4.49724224769707,2.43432145666204,3.13530307678142,4.32863948028414,2.5892652370573,0.324270453550071,1.64736847912849,1.43768206527355,1.11642284300551,1.24815069245824,0,0,0,0.184753190166605,0,0,0,0,0,0,0.390267295715598,0,0.221464689648775,0.956728611944923,0.327726629431476,0.518054945597687,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,7.23599220871019,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,1.87737366450968,9.32061111800809,0,0,0,0,0,0,68.4979966080149,0,0,0,0.185194527369712,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0,0,0,0,0.432021363287205,0.209088296014469,1.52853794622324,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0,0.671538465456314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.972426868273176,1.46729213839588,0.735374033800057,1.11123363900808,1.44224540067226,1.28367683836726,1.26348605881899,1.52087579934144,0.565879024158229,0.561849044819294,1.53660365771686,0.918967503289812,0.952587382566147,0.811190281613988,0.77163688185482,2.88460130562315,1.32479028120958,0.342869252385415,1.59728225543404,1.43061713968393,1.74415699958794,1.50575008664529,1.26921911837515,0.914639864363863,0.789209134313529,1.22223702461276,1.68342681497322,1.89816028998679,1.28055827088233,0,1.08455788830176,0.771626443924566,0,1.63752125911786,0.859484216193193,0,0,0|short_description=p@chr12:112658695..112658748,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:112658695..112658748,+ | |||
|description=CAGE_peak_at_chr12:112658695..112658748,+ | |||
|id=chr12:112658695..112658748,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.65e-09,6;CL:0000677,2.65e-09,6;CL:0000584,2.65e-09,6;CL:0000075,8.36e-08,7;CL:0002563,1.86e-07,9;CL:0002251,1.86e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.92e-14!43;UBERON:0005409!1.83e-12!59;UBERON:0004923!1.28e-11!24;UBERON:0000344!2.68e-11!15;UBERON:0001242!1.11e-09!13;UBERON:0000060!1.11e-09!13;UBERON:0001262!1.11e-09!13;UBERON:0004786!1.11e-09!13;UBERON:0004119!7.99e-09!130;UBERON:0000925!7.99e-09!130;UBERON:0006595!7.99e-09!130;UBERON:0001007!5.51e-08!128;UBERON:0001555!5.51e-08!128;UBERON:0007026!5.51e-08!128;UBERON:0004921!4.14e-07!126;UBERON:0004185!4.14e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.81e-28,31;UBERON:0005409,6.90e-17,47;UBERON:0000344,5.80e-15,15;UBERON:0001242,1.49e-12,13;UBERON:0001262,1.49e-12,13;UBERON:0004786,1.49e-12,13;UBERON:0004923,9.87e-11,24;UBERON:0004119,1.54e-10,118;UBERON:0000925,1.54e-10,118;UBERON:0006595,1.54e-10,118;UBERON:0001007,2.25e-09,116;UBERON:0001555,2.25e-09,116;UBERON:0007026,2.25e-09,116;UBERON:0004921,3.64e-08,114;UBERON:0003350,1.86e-07,9;UBERON:0004808,1.86e-07,9;UBERON:0001277,1.86e-07,9;UBERON:0002108,7.88e-07,4 | |||
|phase1_expression=0,90.0356551709552,52.3249125297966,169.682422543132,157.782154933099,3.02182689441402,7.70921713965235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.4387952241517,13.0763290208287,51.6808767703518,37.4762936658395,36.6301095566011,60.997517645496,59.7311407531036,13.082100128663,8.89042942843484,8.61090702618398,15.8481681015439,0,1.49611180822643,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.5111105032938,0,0,0,0,0,0,0,0,0,0,11.5325718516251,0,0,0.346970653532272,0.913396434936424,0,0,0,0.251333182659351,0.741584903203122,0,0,0.323533699894818,0.220841518460394,0,1.86391761218122,0,0.209446706813455,85.5781134948781,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0,0,0,235.919011050432,74.0461586657924,0,0,0.257734922644187,4.43703754171354,10.229390016864,18.6421113590308,88.2624054472792,22.7284557519135,19.604146286421,12.7332142106337,18.3266241891973,82.6913855961884,59.2218256656662,65.5174789006868,0,0.456994050438915,0,0,0.387904974335251,0.0701358198903186,0.126473074248515,0.147610147979602,0.470996183524124,0.740382983530803,0,2.00214126859313,4.12773889737726,4.49724224769707,2.43432145666204,3.13530307678142,4.32863948028414,2.5892652370573,0.324270453550071,1.64736847912849,1.43768206527355,1.11642284300551,1.24815069245824,0,0,0,0.184753190166605,0,0,0,0,0,0,0.390267295715598,0,0.221464689648775,0.956728611944923,0.327726629431476,0.518054945597687,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,7.23599220871019,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,1.87737366450968,9.32061111800809,0,0,0,0,0,0,68.4979966080149,0,0,0,0.185194527369712,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0,0,0,0,0.432021363287205,0.209088296014469,1.52853794622324,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0,0.671538465456314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.972426868273176,1.46729213839588,0.735374033800057,1.11123363900808,1.44224540067226,1.28367683836726,1.26348605881899,1.52087579934144,0.565879024158229,0.561849044819294,1.53660365771686,0.918967503289812,0.952587382566147,0.811190281613988,0.77163688185482,2.88460130562315,1.32479028120958,0.342869252385415,1.59728225543404,1.43061713968393,1.74415699958794,1.50575008664529,1.26921911837515,0.914639864363863,0.789209134313529,1.22223702461276,1.68342681497322,1.89816028998679,1.28055827088233,0,1.08455788830176,0.771626443924566,0,1.63752125911786,0.859484216193193,0,0,0 | |||
|short_description=p@chr12:112658695..112658748,+ | |||
}} |
Latest revision as of 18:08, 4 August 2015
Short description: | p@chr12:112658695..112658748, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:112658695..112658748, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.65e-09 | 6 |
gut absorptive cell | 2.65e-09 | 6 |
enterocyte | 2.65e-09 | 6 |
columnar/cuboidal epithelial cell | 8.36e-08 | 7 |
intestinal epithelial cell | 1.86e-07 | 9 |
epithelial cell of alimentary canal | 1.86e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.81e-28 | 31 |
gastrointestinal system | 6.90e-17 | 47 |
mucosa | 5.80e-15 | 15 |
intestinal mucosa | 1.49e-12 | 13 |
wall of intestine | 1.49e-12 | 13 |
gastrointestinal system mucosa | 1.49e-12 | 13 |
organ component layer | 9.87e-11 | 24 |
endoderm-derived structure | 1.54e-10 | 118 |
endoderm | 1.54e-10 | 118 |
presumptive endoderm | 1.54e-10 | 118 |
digestive system | 2.25e-09 | 116 |
digestive tract | 2.25e-09 | 116 |
primitive gut | 2.25e-09 | 116 |
subdivision of digestive tract | 3.64e-08 | 114 |
epithelium of mucosa | 1.86e-07 | 9 |
gastrointestinal system epithelium | 1.86e-07 | 9 |
intestinal epithelium | 1.86e-07 | 9 |
small intestine | 7.88e-07 | 4 |