FFCP PHASE1:Mm9::chr14:71173054..71173065,+: Difference between revisions
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{{FFCP|EntrezGene=13449|HGNC=|MCL_coexpression_id=97|UniProt=|association_with_transcript=-13bp_to_ENSMUST00000169106_5end|description=CAGE_peak_4_at_Dok2_5end|id=chr14:71173054..71173065,+|ontology_enrichment_celltype=CL:0000349!9.40e-10!3;CL:0000351!9.40e-10!3;CL:0000068!1.67e-09!3;CL:0002202!1.67e-09!3;CL:0000069!1.67e-09!3;CL:0002632!1.67e-09!3;CL:0002368!1.67e-09!3;CL:0000307!1.67e-09!3;CL:0000377!1.67e-09!3|ontology_enrichment_celltype_v019_2=CL:0000349,1.17e-38,3;CL:0000351,1.17e-38,3;CL:0000068,1.58e-37,3;CL:0002202,1.58e-37,3;CL:0000069,1.58e-37,3;CL:0002632,1.58e-37,3;CL:0002368,1.58e-37,3;CL:0000307,1.58e-37,3;CL:0000377,1.58e-37,3;CL:0002076,4.04e-08,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!3.61e-14!17;UBERON:0005181!3.61e-14!17;UBERON:0002224!3.61e-14!17;UBERON:0000915!3.61e-14!17;UBERON:0008947!3.61e-14!17;UBERON:0003258!3.61e-14!17;UBERON:0009569!1.46e-11!66;UBERON:0005177!1.95e-11!85;UBERON:0000358!9.40e-10!3;UBERON:0000307!9.40e-10!3;UBERON:0003126!1.67e-09!3;UBERON:0001005!1.67e-09!3;UBERON:0007196!1.67e-09!3;UBERON:0001558!1.67e-09!3;UBERON:0002100!3.06e-09!98;UBERON:0002048!2.76e-08!14;UBERON:0000117!2.76e-08!14;UBERON:0000171!2.76e-08!14;UBERON:0000170!2.76e-08!14;UBERON:0005597!2.76e-08!14;UBERON:0000118!2.76e-08!14;UBERON:0002113!3.00e-08!14;UBERON:0003918!3.00e-08!14;UBERON:0005095!3.00e-08!14;UBERON:0007687!3.00e-08!14;UBERON:0006554!4.28e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.17e-38,3;UBERON:0000307,1.17e-38,3;UBERON:0007010,1.17e-38,3;UBERON:0003126,1.58e-37,3;UBERON:0001005,1.58e-37,3;UBERON:0007196,1.58e-37,3;UBERON:0001558,1.58e-37,3;UBERON:0001987,2.35e-07,2;UBERON:0003124,2.35e-07,2;UBERON:0004340,2.35e-07,2;UBERON:0005178,3.08e-07,17;UBERON:0005181,3.08e-07,17;UBERON:0002224,3.08e-07,17;UBERON:0000915,3.08e-07,17;UBERON:0008947,3.08e-07,17;UBERON:0003258,3.08e-07,17|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29894624606728,1.26679932737549,1.51657333504435,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.407302655690628,0,0.350679099451593,0.569128834118316,0.590440591918409,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0.325929952884052,0,0.234690248288502,0,0,0.195133647857799,0,0.44292937929755,0,0.163863314715738,0.690739927463582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,1.0591603543191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,4.88369097422942,4.30626511725483,2.85403847818933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@Dok2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13449 | |||
|HGNC= | |||
|MCL_coexpression_id=97 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-13bp_to_ENSMUST00000169106_5end | |||
|cluster_id=chr14:71173054..71173065,+ | |||
|description=CAGE_peak_4_at_Dok2_5end | |||
|id=chr14:71173054..71173065,+ | |||
|ontology_enrichment_celltype=CL:0000349!9.40e-10!3;CL:0000351!9.40e-10!3;CL:0000068!1.67e-09!3;CL:0002202!1.67e-09!3;CL:0000069!1.67e-09!3;CL:0002632!1.67e-09!3;CL:0002368!1.67e-09!3;CL:0000307!1.67e-09!3;CL:0000377!1.67e-09!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.17e-38,3;CL:0000351,1.17e-38,3;CL:0000068,1.58e-37,3;CL:0002202,1.58e-37,3;CL:0000069,1.58e-37,3;CL:0002632,1.58e-37,3;CL:0002368,1.58e-37,3;CL:0000307,1.58e-37,3;CL:0000377,1.58e-37,3;CL:0002076,4.04e-08,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!3.61e-14!17;UBERON:0005181!3.61e-14!17;UBERON:0002224!3.61e-14!17;UBERON:0000915!3.61e-14!17;UBERON:0008947!3.61e-14!17;UBERON:0003258!3.61e-14!17;UBERON:0009569!1.46e-11!66;UBERON:0005177!1.95e-11!85;UBERON:0000358!9.40e-10!3;UBERON:0000307!9.40e-10!3;UBERON:0003126!1.67e-09!3;UBERON:0001005!1.67e-09!3;UBERON:0007196!1.67e-09!3;UBERON:0001558!1.67e-09!3;UBERON:0002100!3.06e-09!98;UBERON:0002048!2.76e-08!14;UBERON:0000117!2.76e-08!14;UBERON:0000171!2.76e-08!14;UBERON:0000170!2.76e-08!14;UBERON:0005597!2.76e-08!14;UBERON:0000118!2.76e-08!14;UBERON:0002113!3.00e-08!14;UBERON:0003918!3.00e-08!14;UBERON:0005095!3.00e-08!14;UBERON:0007687!3.00e-08!14;UBERON:0006554!4.28e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.17e-38,3;UBERON:0000307,1.17e-38,3;UBERON:0007010,1.17e-38,3;UBERON:0003126,1.58e-37,3;UBERON:0001005,1.58e-37,3;UBERON:0007196,1.58e-37,3;UBERON:0001558,1.58e-37,3;UBERON:0001987,2.35e-07,2;UBERON:0003124,2.35e-07,2;UBERON:0004340,2.35e-07,2;UBERON:0005178,3.08e-07,17;UBERON:0005181,3.08e-07,17;UBERON:0002224,3.08e-07,17;UBERON:0000915,3.08e-07,17;UBERON:0008947,3.08e-07,17;UBERON:0003258,3.08e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29894624606728,1.26679932737549,1.51657333504435,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.407302655690628,0,0.350679099451593,0.569128834118316,0.590440591918409,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0.325929952884052,0,0.234690248288502,0,0,0.195133647857799,0,0.44292937929755,0,0.163863314715738,0.690739927463582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,1.0591603543191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,4.88369097422942,4.30626511725483,2.85403847818933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@Dok2 | |||
}} |
Revision as of 18:45, 4 August 2015
Short description: | p4@Dok2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Dok2_5end |
Coexpression cluster: | MCL_coexpression_mm9:97 |
Association with transcript: | -13bp_to_ENSMUST00000169106_5end |
EntrezGene: | 13449 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.17e-38 | 3 |
trophoblast cell | 1.17e-38 | 3 |
duct epithelial cell | 1.58e-37 | 3 |
epithelial cell of tracheobronchial tree | 1.58e-37 | 3 |
branched duct epithelial cell | 1.58e-37 | 3 |
epithelial cell of lower respiratory tract | 1.58e-37 | 3 |
respiratory epithelial cell | 1.58e-37 | 3 |
tracheal epithelial cell | 1.58e-37 | 3 |
tracheoblast | 1.58e-37 | 3 |
endo-epithelial cell | 4.04e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 1.17e-38 | 3 |
blastula | 1.17e-38 | 3 |
cleaving embryo | 1.17e-38 | 3 |
trachea | 1.58e-37 | 3 |
respiratory airway | 1.58e-37 | 3 |
tracheobronchial tree | 1.58e-37 | 3 |
lower respiratory tract | 1.58e-37 | 3 |
placenta | 2.35e-07 | 2 |
chorion | 2.35e-07 | 2 |
allantois | 2.35e-07 | 2 |
thoracic cavity element | 3.08e-07 | 17 |
thoracic segment organ | 3.08e-07 | 17 |
thoracic cavity | 3.08e-07 | 17 |
thoracic segment of trunk | 3.08e-07 | 17 |
respiratory primordium | 3.08e-07 | 17 |
endoderm of foregut | 3.08e-07 | 17 |