FFCP PHASE1:Mm9::chr1:133904901..133904934,+: Difference between revisions
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{{FFCP|EntrezGene=13714|HGNC=|MCL_coexpression_id=123|UniProt=Q8C6Q0|association_with_transcript=27bp_to_ENSMUST00000146432_5end|description=CAGE_peak_3_at_Elk4_5end|id=chr1:133904901..133904934,+|ontology_enrichment_celltype=CL:0000988!5.79e-08!32;CL:0002032!5.79e-08!32;CL:0000037!5.79e-08!32;CL:0000566!5.79e-08!32;CL:0000837!5.79e-08!32;CL:0002031!4.03e-07!25;CL:0000838!7.19e-07!12|ontology_enrichment_celltype_v019_2=CL:0000988,1.57e-08,32;CL:0002032,1.57e-08,32;CL:0000037,1.57e-08,32;CL:0000837,1.57e-08,32;CL:0002031,1.25e-07,25;CL:0000838,5.17e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005911!1.18e-15!69;UBERON:0002405!1.86e-15!70;UBERON:0003929!1.21e-14!55;UBERON:0005057!1.34e-14!51;UBERON:0004119!5.03e-14!130;UBERON:0000925!5.03e-14!130;UBERON:0006595!5.03e-14!130;UBERON:0001007!7.98e-14!128;UBERON:0001555!7.98e-14!128;UBERON:0007026!7.98e-14!128;UBERON:0004921!3.12e-13!126;UBERON:0004185!3.12e-13!126;UBERON:0000490!6.93e-12!66;UBERON:0002193!6.14e-11!48;UBERON:0004177!1.15e-10!29;UBERON:0000077!1.81e-10!97;UBERON:0002390!8.14e-10!45;UBERON:0003061!8.14e-10!45;UBERON:0000065!9.96e-10!41;UBERON:0001041!1.07e-09!92;UBERON:0006562!1.44e-09!24;UBERON:0001557!1.44e-09!24;UBERON:0001042!1.44e-09!24;UBERON:0008814!1.44e-09!24;UBERON:0009145!1.44e-09!24;UBERON:0002370!2.33e-09!23;UBERON:0000974!2.33e-09!23;UBERON:0004807!2.33e-09!23;UBERON:0005058!2.33e-09!23;UBERON:0003351!2.33e-09!23;UBERON:0009113!2.33e-09!23;UBERON:0003295!2.33e-09!23;UBERON:0009722!2.33e-09!23;UBERON:0005562!2.33e-09!23;UBERON:0007690!2.33e-09!23;UBERON:0000072!3.37e-09!27;UBERON:0001004!6.88e-09!42;UBERON:0002368!1.26e-08!60;UBERON:0003104!3.02e-08!131;UBERON:0009142!3.02e-08!131;UBERON:0003408!3.16e-08!24;UBERON:0002530!1.54e-07!65;UBERON:0000063!2.36e-07!35;UBERON:0003081!7.42e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.34e-18,118;UBERON:0000925,7.34e-18,118;UBERON:0006595,7.34e-18,118;UBERON:0001007,1.15e-17,116;UBERON:0001555,1.15e-17,116;UBERON:0007026,1.15e-17,116;UBERON:0004921,5.33e-17,114;UBERON:0005911,1.46e-15,69;UBERON:0003929,6.11e-15,55;UBERON:0001041,1.62e-13,80;UBERON:0000490,7.33e-12,66;UBERON:0000077,1.37e-11,35;UBERON:0002193,1.93e-11,48;UBERON:0002405,1.93e-11,48;UBERON:0004177,4.06e-11,29;UBERON:0005057,4.06e-11,29;UBERON:0002390,2.79e-10,45;UBERON:0003061,2.79e-10,45;UBERON:0006562,5.35e-10,24;UBERON:0001557,5.35e-10,24;UBERON:0001042,5.35e-10,24;UBERON:0008814,5.35e-10,24;UBERON:0009145,5.35e-10,24;UBERON:0002370,8.74e-10,23;UBERON:0000974,8.74e-10,23;UBERON:0004807,8.74e-10,23;UBERON:0005058,8.74e-10,23;UBERON:0003351,8.74e-10,23;UBERON:0009113,8.74e-10,23;UBERON:0003295,8.74e-10,23;UBERON:0009722,8.74e-10,23;UBERON:0005562,8.74e-10,23;UBERON:0007690,8.74e-10,23;UBERON:0000065,1.03e-09,41;UBERON:0000072,1.33e-09,27;UBERON:0001004,5.02e-09,42;UBERON:0003408,8.37e-09,24;UBERON:0002368,1.12e-08,60;UBERON:0002530,1.07e-07,65|phase1_expression=1.12104192973356,3.14077866875425,1.81999695755814,9.37639055051173,4.50806156951712,2.35030980676646,3.50418960893289,15.7530454598723,5.34997144176334,5.14941957908386,4.62288514208863,3.43020283679947,20.5440875917447,17.4840804837995,3.66420737997229,6.47920855647443,0,26.9720151381293,30.3022898268683,22.4926515452956,2.12608225377674,10.0283860712894,12.015190300391,4.47978783821539,3.44113921600755,3.44539178469012,0.86152399231815,3.878482188346,2.47030445293286,2.77233142735924,3.54768817048488,3.81018404075779,6.1506478758457,0,4.04392267651784,3.49092755252834,2.24586291888606,1.67412652294763,0.7813353445238,0.523523743973798,2.94115744015507,2.73218193983378,1.45653105909346,1.76255545165808,1.52065396829272,1.28482726513177,3.9119567217402,2.39827672018491,1.75748946187577,2.52758868796568,1.95980990275508,1.43752564364972,24.831825696545,3.62681071005672,15.7964085596958,2.82985379639542,4.29800159908135,2.06268836910977,0,0,0.633831403506179,0.677689064138264,1.77858959222228,0.899899717281399,0,0.7104801149461,1.19840044207362,1.15265491596466,0.207379224616955,0,0,0.571301968807607,0.441737081903227,0,0.0958454710182364,0,0,0,0.153606533256243,0.131886287730194,0,0,0,1.12552522006336,0.763991238884051,0.883885756421003,0.996601765593721,0.372798891650601,1.21161909333094,0.604572480854284,2.6087803983151,5.16254326188832,8.15965600449301,6.47643829965381,3.24888208723835,12.5447528387254,3.65155492342555,0.681721290312231,1.29893002301434,0.35333957451034,0.845060518660083,1.28326477414318,2.54805239706646,0,3.030874574157,1.77351905832569,2.02209778005913,6.16592950482924,32.6261733395436,2.67195850316685,0.693941307064543,0.608930956624282,2.07553947530453,1.95939432718409,1.64624189989987,1.50799909595611,2.22475470960936,6.94076913215576,3.5384422077995,1.29413479957927,4.63767188766826,4.363877278217,5.59175283654366,0.585561594023094,0.209446706813455,6.89734049063197,9.70502508497954,8.99854096490112,7.62421362438388,0.599162557619291,0.915001205637253,0,0.869121600961382,1.278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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13714 | |||
|HGNC= | |||
|MCL_coexpression_id=123 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8C6Q0 | |||
|association_with_transcript=27bp_to_ENSMUST00000146432_5end | |||
|cluster_id=chr1:133904901..133904934,+ | |||
|description=CAGE_peak_3_at_Elk4_5end | |||
|id=chr1:133904901..133904934,+ | |||
|ontology_enrichment_celltype=CL:0000988!5.79e-08!32;CL:0002032!5.79e-08!32;CL:0000037!5.79e-08!32;CL:0000566!5.79e-08!32;CL:0000837!5.79e-08!32;CL:0002031!4.03e-07!25;CL:0000838!7.19e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.57e-08,32;CL:0002032,1.57e-08,32;CL:0000037,1.57e-08,32;CL:0000837,1.57e-08,32;CL:0002031,1.25e-07,25;CL:0000838,5.17e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.34e-18,118;UBERON:0000925,7.34e-18,118;UBERON:0006595,7.34e-18,118;UBERON:0001007,1.15e-17,116;UBERON:0001555,1.15e-17,116;UBERON:0007026,1.15e-17,116;UBERON:0004921,5.33e-17,114;UBERON:0005911,1.46e-15,69;UBERON:0003929,6.11e-15,55;UBERON:0001041,1.62e-13,80;UBERON:0000490,7.33e-12,66;UBERON:0000077,1.37e-11,35;UBERON:0002193,1.93e-11,48;UBERON:0002405,1.93e-11,48;UBERON:0004177,4.06e-11,29;UBERON:0005057,4.06e-11,29;UBERON:0002390,2.79e-10,45;UBERON:0003061,2.79e-10,45;UBERON:0006562,5.35e-10,24;UBERON:0001557,5.35e-10,24;UBERON:0001042,5.35e-10,24;UBERON:0008814,5.35e-10,24;UBERON:0009145,5.35e-10,24;UBERON:0002370,8.74e-10,23;UBERON:0000974,8.74e-10,23;UBERON:0004807,8.74e-10,23;UBERON:0005058,8.74e-10,23;UBERON:0003351,8.74e-10,23;UBERON:0009113,8.74e-10,23;UBERON:0003295,8.74e-10,23;UBERON:0009722,8.74e-10,23;UBERON:0005562,8.74e-10,23;UBERON:0007690,8.74e-10,23;UBERON:0000065,1.03e-09,41;UBERON:0000072,1.33e-09,27;UBERON:0001004,5.02e-09,42;UBERON:0003408,8.37e-09,24;UBERON:0002368,1.12e-08,60;UBERON:0002530,1.07e-07,65 | |||
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| |||
|short_description=p3@Elk4 | |||
}} |
Revision as of 18:47, 4 August 2015
Short description: | p3@Elk4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Elk4_5end |
Coexpression cluster: | MCL_coexpression_mm9:123 |
Association with transcript: | 27bp_to_ENSMUST00000146432_5end |
EntrezGene: | 13714 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.57e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.57e-08 | 32 |
hematopoietic stem cell | 1.57e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.57e-08 | 32 |
hematopoietic lineage restricted progenitor cell | 1.25e-07 | 25 |
lymphoid lineage restricted progenitor cell | 5.17e-07 | 12 |