FFCP PHASE1:Mm9::chr5:9161608..9161619,-: Difference between revisions
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{{FFCP|EntrezGene=23857|HGNC=|UniProt=Q8CE22|association_with_transcript=98bp_to_ENSMUST00000071921_5end|description=CAGE_peak_3_at_Dmtf1_5end|id=chr5:9161608..9161619,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!2.35e-09!49;UBERON:0000033!5.95e-08!63;UBERON:0002346!1.73e-07!71;UBERON:0003075!1.73e-07!71;UBERON:0007284!1.73e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0003056,5.10e-10,49;UBERON:0002346,5.40e-09,64;UBERON:0003075,5.40e-09,64;UBERON:0007284,5.40e-09,64;UBERON:0010371,1.18e-08,73;UBERON:0000955,4.66e-08,47;UBERON:0006238,4.66e-08,47;UBERON:0002616,2.18e-07,46;UBERON:0004121,4.43e-07,95;UBERON:0000924,4.43e-07,95;UBERON:0006601,4.43e-07,95;UBERON:0003080,8.00e-07,40|phase1_expression=0.640595388419176,0,0,0.30246421130683,1.00179145989269,0.33575854382378,0.467225281191051,0,0.281577444303333,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,1.02051948181284,0.297872853602656,0.522399578277871,0.159992422793407,0.45881856213434,0,0,0.215471232685889,0,0,0.665191531965914,1.27006134691926,0.61506478758457,0,1.1554064790051,0.831173226792462,0.612508068787107,0.837063261473815,0.7813353445238,0,1.17646297606203,0,0,0,0.304130793658544,0.550640256485045,0,0.218025156380447,0,0.58328969722285,0.279972843250725,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0.899899717281399,0,0,0.599200221036809,0.384218305321555,1.55534418462716,0.810035629990144,0.841299845405528,0,0.220868540951614,0.857435594504678,0.766763768145891,4.5960939330501,0,0.893811366596314,0.307213066512487,0.527545150920775,0.274462930807229,0,1.67509799400829,1.12552522006336,1.98637722109853,0,0.284743361598206,0.931997229126503,0.151452386666368,0.226714680320357,0.579728977403356,1.72084775396277,0,0,0.649776417447669,0.896053774194671,0.421333260395256,0.511290967734173,0,0,0,1.28326477414318,2.54805239706646,7.11066703153331,0.649473123033642,0.506719730950197,0,0.5709193985953,0.517875767294343,1.03909497345377,0.693941307064543,0.608930956624282,0.230615497256059,0.60289056221049,0.823120949949934,0.125666591329675,0.247194967734374,0.289198713839823,0,0.161766849947409,0,1.93950101254089,0,2.92780797011547,1.8850203613211,0.255457055208591,0.479260498023681,0,0.127070227073065,1.64769703345305,0.915001205637253,1.88481528169297,1.39059456153821,2.04572365864264,1.0389402227978,2.10913641988085,0.916554274652847,0.248813941220186,1.0108910337347,1.26265113531884,1.04096354370163,0.459804208866946,1.44049703844279,1.50704817835715,2.9255694635071,2.562274405697,3.18585863503078,0.776110112217047,0.431135985865684,0.756424320671277,1.93546236580344,1.31517439456545,1.66828349535359,1.74126083261083,1.4404749548556,0.398068533636986,0.702213187313235,0.51469581422943,1.98914449576915,0.207125772535502,0.234526059981096,0.540186184383045,0,0.196764231747404,0.308534225774757,0.465067889500816,0.268273401399619,1.16765342367169,1.15191894939436,0.492502392237286,0.162137619091711,0.877199924551994,0.219550115291051,1.20785776884335,2.10289948564127,0.720332286654991,0,0,0.853153002140936,0.696710015581316,0.77320476793256,0.403367049246685,0.444756087689741,0.190225626112559,0,0.823494773620054,1.00534083520108,0.198956472041151,0.38992817423824,0,0.216138049874694,0.597423819763102,0,0.342745537829186,0,1.4255592949172,1.35766741017338,1.33258057791605,1.39120381673366,1.03327103585722,0.470996183524124,0.987177311374404,0,0,0.196558995113203,0.224862112384854,0.811440485554012,0.72353147925725,0,0,0.324270453550071,0.274561413188081,0,0.744281895337007,0.312037673114561,0.252578877947112,0,0,1.66277871149944,0.37898282354097,0.488894929326078,0.339490171550376,0.704070744865506,0.502518772325447,0.714130922658041,1.95133647857799,1.10344600874334,1.55025282754142,0.797273843287435,1.47476983244164,0.172684981865896,1.3018415272336,0,0,0,1.93155722413313,0.642202359951168,1.05490517932983,0,0.504941854408746,0.631016438832513,1.17131623288992,0.430846795465598,0.477937595905104,0,1.13230612315533,1.21443210502468,2.04579100537918,1.97643888973262,2.57057053137446,1.13552068166615,0.35613120733451,0.81443479676788,1.15479086080775,0,0.971122544619926,0.604647113929502,0.377210159511796,0.590603785761546,0.614870295887855,0.775284879504663,1.09060118843252,1.78248689192361,0.632073515871632,1.05418608574999,2.06271086496374,2.38307724027652,1.8006109403131,0.905510786479282,1.07168517515796,1.24138163549592,1.42695054081656,1.15184314421485,2.13125464380219,0.704015124191131,0.63549621259146,0.220528398054962,0.65954501176592,1.13025098687134,1.38719727334758,0.954978752025092,0.492422699235184,0.291480836629851,1.11255181206306,0.512612642393558,0,0.555583582109135,0.376736914009382,0.136694227721025,0.457556346413045,0.339956859987711,0.839708713941948,0.690999869022119,0,0.632671987162271,0.813277868507395,0.86404272657441,1.04544148007234,0,0.269728692769641,0.9091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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:23857 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8CE22 | |||
|association_with_transcript=98bp_to_ENSMUST00000071921_5end | |||
|cluster_id=chr5:9161608..9161619,- | |||
|description=CAGE_peak_3_at_Dmtf1_5end | |||
|id=chr5:9161608..9161619,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!2.35e-09!49;UBERON:0000033!5.95e-08!63;UBERON:0002346!1.73e-07!71;UBERON:0003075!1.73e-07!71;UBERON:0007284!1.73e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,5.10e-10,49;UBERON:0002346,5.40e-09,64;UBERON:0003075,5.40e-09,64;UBERON:0007284,5.40e-09,64;UBERON:0010371,1.18e-08,73;UBERON:0000955,4.66e-08,47;UBERON:0006238,4.66e-08,47;UBERON:0002616,2.18e-07,46;UBERON:0004121,4.43e-07,95;UBERON:0000924,4.43e-07,95;UBERON:0006601,4.43e-07,95;UBERON:0003080,8.00e-07,40 | |||
|phase1_expression=0.640595388419176,0,0,0.30246421130683,1.00179145989269,0.33575854382378,0.467225281191051,0,0.281577444303333,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,1.02051948181284,0.297872853602656,0.522399578277871,0.159992422793407,0.45881856213434,0,0,0.215471232685889,0,0,0.665191531965914,1.27006134691926,0.61506478758457,0,1.1554064790051,0.831173226792462,0.612508068787107,0.837063261473815,0.7813353445238,0,1.17646297606203,0,0,0,0.304130793658544,0.550640256485045,0,0.218025156380447,0,0.58328969722285,0.279972843250725,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0.899899717281399,0,0,0.599200221036809,0.384218305321555,1.55534418462716,0.810035629990144,0.841299845405528,0,0.220868540951614,0.857435594504678,0.766763768145891,4.5960939330501,0,0.893811366596314,0.307213066512487,0.527545150920775,0.274462930807229,0,1.67509799400829,1.12552522006336,1.98637722109853,0,0.284743361598206,0.931997229126503,0.151452386666368,0.226714680320357,0.579728977403356,1.72084775396277,0,0,0.649776417447669,0.896053774194671,0.421333260395256,0.511290967734173,0,0,0,1.28326477414318,2.54805239706646,7.11066703153331,0.649473123033642,0.506719730950197,0,0.5709193985953,0.517875767294343,1.03909497345377,0.693941307064543,0.608930956624282,0.230615497256059,0.60289056221049,0.823120949949934,0.125666591329675,0.247194967734374,0.289198713839823,0,0.161766849947409,0,1.93950101254089,0,2.92780797011547,1.8850203613211,0.255457055208591,0.479260498023681,0,0.127070227073065,1.64769703345305,0.915001205637253,1.88481528169297,1.39059456153821,2.04572365864264,1.0389402227978,2.10913641988085,0.916554274652847,0.248813941220186,1.0108910337347,1.26265113531884,1.04096354370163,0.459804208866946,1.44049703844279,1.50704817835715,2.9255694635071,2.562274405697,3.18585863503078,0.776110112217047,0.431135985865684,0.756424320671277,1.93546236580344,1.31517439456545,1.66828349535359,1.74126083261083,1.4404749548556,0.398068533636986,0.702213187313235,0.51469581422943,1.98914449576915,0.207125772535502,0.234526059981096,0.540186184383045,0,0.196764231747404,0.308534225774757,0.465067889500816,0.268273401399619,1.16765342367169,1.15191894939436,0.492502392237286,0.162137619091711,0.877199924551994,0.219550115291051,1.20785776884335,2.10289948564127,0.720332286654991,0,0,0.853153002140936,0.696710015581316,0.77320476793256,0.403367049246685,0.444756087689741,0.190225626112559,0,0.823494773620054,1.00534083520108,0.198956472041151,0.38992817423824,0,0.216138049874694,0.597423819763102,0,0.342745537829186,0,1.4255592949172,1.35766741017338,1.33258057791605,1.39120381673366,1.03327103585722,0.470996183524124,0.987177311374404,0,0,0.196558995113203,0.224862112384854,0.811440485554012,0.72353147925725,0,0,0.324270453550071,0.274561413188081,0,0.744281895337007,0.312037673114561,0.252578877947112,0,0,1.66277871149944,0.37898282354097,0.488894929326078,0.339490171550376,0.704070744865506,0.502518772325447,0.714130922658041,1.95133647857799,1.10344600874334,1.55025282754142,0.797273843287435,1.47476983244164,0.172684981865896,1.3018415272336,0,0,0,1.93155722413313,0.642202359951168,1.05490517932983,0,0.504941854408746,0.631016438832513,1.17131623288992,0.430846795465598,0.477937595905104,0,1.13230612315533,1.21443210502468,2.04579100537918,1.97643888973262,2.57057053137446,1.13552068166615,0.35613120733451,0.81443479676788,1.15479086080775,0,0.971122544619926,0.604647113929502,0.377210159511796,0.590603785761546,0.614870295887855,0.775284879504663,1.09060118843252,1.78248689192361,0.632073515871632,1.05418608574999,2.06271086496374,2.38307724027652,1.8006109403131,0.905510786479282,1.07168517515796,1.24138163549592,1.42695054081656,1.15184314421485,2.13125464380219,0.704015124191131,0.63549621259146,0.220528398054962,0.65954501176592,1.13025098687134,1.38719727334758,0.954978752025092,0.492422699235184,0.291480836629851,1.11255181206306,0.512612642393558,0,0.555583582109135,0.376736914009382,0.136694227721025,0.457556346413045,0.339956859987711,0.839708713941948,0.690999869022119,0,0.632671987162271,0.813277868507395,0.86404272657441,1.04544148007234,0,0.269728692769641,0.909188012978695,1.04702376793612,0.777689839750757,0,0.56369293868419,0.448549638131936,0.330916980914195,0.194451188344048,0,0.337912250981556,1.64300134104056,2.21347454234715,1.78260885523708,1.93267296660805,1.72818003754719,0,0.810900861160657,0.616265742988964,0.51968329191118,0.537080087002444,0,0.480781798079875,0.147689527174577,0.706765149637033,0.228620419965,0.302478555410522,0.292373642219257,0.384847366561318,0.233753804363138,0.680191150845634,0.221985953374065,0.179427713218951,0,0.772758376128762,0.93841237725591,1.09890974560359,1.07184189539533,0.501572104035363,0.564751842617067,1.38097570952153,0.572895513439397,1.03111909406213,2.05524755931193,0,0.675022500231806,1.35096360967266,1.35942722695261,0,0.415149390336707,0.399024873401031,1.02440163452481,0.243106717068294,0.209613162627982,0.367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| |||
|short_description=p3@Dmtf1 | |||
}} |
Revision as of 18:57, 4 August 2015
Short description: | p3@Dmtf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dmtf1_5end |
Coexpression cluster: | NA |
Association with transcript: | 98bp_to_ENSMUST00000071921_5end |
EntrezGene: | 23857 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 5.10e-10 | 49 |
neurectoderm | 5.40e-09 | 64 |
neural plate | 5.40e-09 | 64 |
presumptive neural plate | 5.40e-09 | 64 |
ecto-epithelium | 1.18e-08 | 73 |
brain | 4.66e-08 | 47 |
future brain | 4.66e-08 | 47 |
regional part of brain | 2.18e-07 | 46 |
ectoderm-derived structure | 4.43e-07 | 95 |
ectoderm | 4.43e-07 | 95 |
presumptive ectoderm | 4.43e-07 | 95 |
anterior neural tube | 8.00e-07 | 40 |