FFCP PHASE1:Mm9::chr14:73542853..73542879,+: Difference between revisions
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{{FFCP|EntrezGene=105670|HGNC=|MCL_coexpression_id=863|UniProt=Q99LJ7|association_with_transcript=0bp_to_ENSMUST00000170677_5end|description=CAGE_peak_4_at_Rcbtb2_5end|id=chr14:73542853..73542879,+|ontology_enrichment_celltype=CL:0000540!2.30e-09!33;CL:0000047!2.30e-09!33;CL:0000031!2.30e-09!33;CL:0000404!2.30e-09!33|ontology_enrichment_celltype_v019_2=CL:0000540,1.76e-09,33;CL:0000047,1.76e-09,33;CL:0000031,1.76e-09,33;CL:0000404,1.76e-09,33;CL:0000221,8.22e-07,44;CL:0000133,8.22e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!1.94e-11!94;UBERON:0007811!5.79e-10!86;UBERON:0001017!1.91e-09!73;UBERON:0005743!1.91e-09!73;UBERON:0002346!8.09e-09!71;UBERON:0003075!8.09e-09!71;UBERON:0007284!8.09e-09!71;UBERON:0000073!9.87e-09!75;UBERON:0001016!9.87e-09!75;UBERON:0003056!5.76e-08!49;UBERON:0004121!7.40e-08!102;UBERON:0000924!7.40e-08!102;UBERON:0006601!7.40e-08!102;UBERON:0000033!2.14e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.36e-09,73;UBERON:0002346,2.56e-09,64;UBERON:0003075,2.56e-09,64;UBERON:0007284,2.56e-09,64;UBERON:0001016,8.62e-09,75;UBERON:0004121,3.64e-08,95;UBERON:0000924,3.64e-08,95;UBERON:0006601,3.64e-08,95;UBERON:0003056,4.41e-08,49;UBERON:0010371,2.96e-07,73;UBERON:0000073,7.29e-07,54;UBERON:0002020,8.75e-07,34;UBERON:0000153,9.78e-07,43|phase1_expression=4.16387002472464,0.697950815278722,0.454999239389536,0.30246421130683,0,0.33575854382378,1.16806320297763,1.03298658753261,0.422366166455,0.936258105287974,0.856089841127525,1.03703806693937,2.22560948910567,2.01066925563694,0.333109761815663,0.809901069559304,0,1.26184866143295,0.822686601634433,2.12194825899015,1.87095238332354,3.3758923408301,4.17919662622297,0.47997726838022,0.68822784320151,0.57423196411502,0,0,0.190023419456374,0,1.10865255327652,1.27006134691926,0.61506478758457,0,0.866554859253824,0.332469290716985,0.816677425049476,0.418531630736908,2.3440060335714,1.0470474879476,0.588231488031014,0.683045484958446,1.45653105909346,1.25896817975577,1.52065396829272,0.917733760808408,1.56478268869608,2.39827672018491,0.439372365468944,2.91644848611425,1.67983705950435,1.43752564364972,1.17447824240415,2.90144856804538,1.68046899571232,0.771778308107841,0.573066879877513,1.03134418455488,5.66486090406874,4.23192783417626,6.97214543856797,0.338844532069132,2.66788438833342,1.3498495759221,1.97773272513395,2.1314403448383,2.09720077362883,0.384218305321555,4.66603255388149,6.07526722492608,6.09942387919008,5.42736870367227,3.3130281142742,5.87955836231779,5.84657373211242,13.7882817991503,3.30347642998166,2.17068474744819,1.0752457327937,4.74790635828698,3.47653045689157,4.16730696445408,2.23346399201105,1.12552522006336,1.5279824777681,4.41942878210502,5.41012387036591,6.15118171223492,1.13589289999776,0.831287161174641,0.869593466105033,0.860423876981386,1.3599426674155,0.539703191637817,2.59910566979068,0.448026887097336,0.983110940922263,0.681721290312231,1.03914401841148,2.12003744706204,6.33795388995062,0,2.54805239706646,0,0.649473123033642,0.760079596425296,1.01104889002957,1.02765491747154,1.03575153458869,1.03909497345377,3.81667718885499,4.87144765299426,0.922461989024234,1.95939432718409,3.41007250693544,1.0053327306374,2.47194967734374,1.87979163995885,1.76922110389975,1.94120219936891,0.883366073841574,1.45462575940567,1.86391761218122,2.34224637609238,3.14170060220183,1.53274233125155,2.27648736561249,3.59941638596045,2.03312363316904,2.39665023047716,2.74500361691176,5.52879149296603,2.60736480288415,1.02286182932132,1.24672826735736,2.59586020908412,4.17541391786297,1.61729061793121,1.51633655060205,1.05220927943237,9.49879233627737,13.104419952708,8.82304436046211,4.21973489940002,6.05524842446818,4.99643509110914,4.49768277886698,1.03481348295606,6.68260778091811,6.99692496620931,6.862093842394,5.91828477554452,5.28289773528636,1.74126083261083,1.23469281844766,4.57778813682534,2.1066395619397,1.80143534980301,3.40996199274711,5.59239585845855,4.69052119962192,5.04173772090842,3.55117103377815,2.55793501271625,0.925602677324269,0.930135779001631,0.804820204198858,1.75148013550754,2.13927804887525,1.64167464079095,0.972825714550269,1.31579988682799,0.658650345873152,0.805238512562231,3.78521907415429,4.01327988279209,0,0,6.82522401712749,7.66381017139447,3.8660238396628,3.22693639397348,1.77902435075896,2.47293313946327,0,1.4822905925161,1.25667604400135,2.98434708061726,1.75467678407208,0.898819408654221,0.648414149624083,0.199141273254367,6.06937283049861,4.79843752960861,5.63538678365402,3.46207257337034,4.46090720485539,3.71719845418688,2.33975187359752,0.590440591918409,0.784993639206874,1.1105744752962,0.889357881261447,2.33583148002532,1.37591296579242,1.79889689907883,1.21716072833102,1.4470629585145,1.2731292589071,2.87696137450811,1.94562272130042,1.64736847912849,2.87536413054709,1.11642284300551,2.80833905803104,1.26289438973556,0.896987067609561,0.482443521363367,0.739012760666419,6.63219941196697,4.56301934037672,4.752862401705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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:105670 | |||
|HGNC= | |||
|MCL_coexpression_id=863 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q99LJ7 | |||
|association_with_transcript=0bp_to_ENSMUST00000170677_5end | |||
|cluster_id=chr14:73542853..73542879,+ | |||
|description=CAGE_peak_4_at_Rcbtb2_5end | |||
|id=chr14:73542853..73542879,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.30e-09!33;CL:0000047!2.30e-09!33;CL:0000031!2.30e-09!33;CL:0000404!2.30e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.76e-09,33;CL:0000047,1.76e-09,33;CL:0000031,1.76e-09,33;CL:0000404,1.76e-09,33;CL:0000221,8.22e-07,44;CL:0000133,8.22e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.94e-11!94;UBERON:0007811!5.79e-10!86;UBERON:0001017!1.91e-09!73;UBERON:0005743!1.91e-09!73;UBERON:0002346!8.09e-09!71;UBERON:0003075!8.09e-09!71;UBERON:0007284!8.09e-09!71;UBERON:0000073!9.87e-09!75;UBERON:0001016!9.87e-09!75;UBERON:0003056!5.76e-08!49;UBERON:0004121!7.40e-08!102;UBERON:0000924!7.40e-08!102;UBERON:0006601!7.40e-08!102;UBERON:0000033!2.14e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.36e-09,73;UBERON:0002346,2.56e-09,64;UBERON:0003075,2.56e-09,64;UBERON:0007284,2.56e-09,64;UBERON:0001016,8.62e-09,75;UBERON:0004121,3.64e-08,95;UBERON:0000924,3.64e-08,95;UBERON:0006601,3.64e-08,95;UBERON:0003056,4.41e-08,49;UBERON:0010371,2.96e-07,73;UBERON:0000073,7.29e-07,54;UBERON:0002020,8.75e-07,34;UBERON:0000153,9.78e-07,43 | |||
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| |||
|short_description=p4@Rcbtb2 | |||
}} |
Revision as of 19:04, 4 August 2015
Short description: | p4@Rcbtb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Rcbtb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:863 |
Association with transcript: | 0bp_to_ENSMUST00000170677_5end |
EntrezGene: | 105670 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.76e-09 | 33 |
neuronal stem cell | 1.76e-09 | 33 |
neuroblast | 1.76e-09 | 33 |
electrically signaling cell | 1.76e-09 | 33 |
ectodermal cell | 8.22e-07 | 44 |
neurectodermal cell | 8.22e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.36e-09 | 73 |
neurectoderm | 2.56e-09 | 64 |
neural plate | 2.56e-09 | 64 |
presumptive neural plate | 2.56e-09 | 64 |
nervous system | 8.62e-09 | 75 |
ectoderm-derived structure | 3.64e-08 | 95 |
ectoderm | 3.64e-08 | 95 |
presumptive ectoderm | 3.64e-08 | 95 |
pre-chordal neural plate | 4.41e-08 | 49 |
ecto-epithelium | 2.96e-07 | 73 |
regional part of nervous system | 7.29e-07 | 54 |
gray matter | 8.75e-07 | 34 |
anterior region of body | 9.78e-07 | 43 |