FFCP PHASE1:Mm9::chr10:79563899..79563917,-: Difference between revisions
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{{FFCP|EntrezGene=216161|HGNC=|UniProt=Q7TNB8|association_with_transcript=14bp_to_uc007gbm.1_5end|description=CAGE_peak_6_at_Sbno2_5end|id=chr10:79563899..79563917,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000680,1.29e-11,6;CL:0000187,1.29e-11,6;CL:0000056,1.29e-11,6;CL:0000222,7.82e-10,7;CL:0000066,1.18e-07,25;CL:0000355,1.85e-07,9;CL:0000682,1.94e-07,3;CL:0000473,3.25e-07,7;CL:0002494,7.02e-07,3;CL:0000737,7.02e-07,3;CL:0000746,7.02e-07,3;CL:0000513,7.02e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004923!2.98e-08!24|ontology_enrichment_uberon_v019_2=UBERON:0004923,1.07e-09,24;UBERON:0000344,1.81e-09,15;UBERON:0000947,4.48e-08,4;UBERON:0001637,4.48e-08,4;UBERON:0004573,4.48e-08,4;UBERON:0003509,4.48e-08,4;UBERON:0004571,4.48e-08,4;UBERON:0010191,4.48e-08,4;UBERON:0004572,4.48e-08,4;UBERON:0001134,1.85e-07,9;UBERON:0002036,1.85e-07,9;UBERON:0002385,1.85e-07,9;UBERON:0000486,1.85e-07,9;UBERON:0007503,1.85e-07,9;UBERON:0001015,1.85e-07,9;UBERON:0002329,1.85e-07,9;UBERON:0003082,1.85e-07,9;UBERON:0003059,1.85e-07,9;UBERON:0007282,1.85e-07,9;UBERON:0004290,1.85e-07,9;UBERON:0009618,1.85e-07,9;UBERON:0001242,4.72e-07,13;UBERON:0001262,4.72e-07,13;UBERON:0004786,4.72e-07,13;UBERON:0005631,8.40e-07,3;UBERON:0000478,8.40e-07,3;UBERON:0000158,8.40e-07,3|phase1_expression=0,11.8651638597383,10.4649825059593,3.0246421130683,2.00358291978539,0.671517087647559,0.700837921786577,0,0,0,0,0,0,0,0.333109761815663,0,0,0.157731082679119,0,0.42438965179803,0.425216450755349,0,0,1.43993180514066,1.83527424853736,5.7423196411502,6.03066794622705,5.38678081714723,0.190023419456374,1.76421090831952,2.21730510655305,0,0,0,0,0,0,0,0,0,0,0,0,1.38486499773135,2.02753862439029,3.12029478674859,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,3.08711323243136,3.72493471920384,2.06268836910977,0,0,0,1.69422266034566,0.889294796111139,1.3498495759221,0.988866362566974,2.8419204597844,1.79760066311043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28734528666413,0.982430281388212,0.579728977403356,0,1.3599426674155,0,1.29955283489534,1.79210754838934,0,1.02258193546835,1.29893002301434,0,0,3.84979432242953,0,0,0,0,0,0.5709193985953,2.07150306917737,1.1875371125186,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0.879666139307728,5.93267922562497,2.89198713839823,0,0.323533699894818,0,0,0,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.373220911830279,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,7.26921322564356,1.58670339998127,0,0,0.128867461322093,0,0,0.190225626112559,4.2707615539006,0,0,0.198956472041151,0.58489226135736,1.79763881730844,0.648414149624083,0.796565093017469,0,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0,0,0.246794327843601,0.592905254174298,0,0.196558995113203,0,0.202860121388503,0.482354319504834,0,0.575392274901621,0,0.823684239564244,0,0,0.312037673114561,0,0.358794827043824,0,1.66277871149944,0,0,0,0,1.34005005953453,1.19021820443007,0.195133647857799,0.157635144106191,0.664394068946325,0.956728611944923,0.655453258862952,1.72684981865896,1.73578870297814,0,1.63171705145613,1.47529281905711,0.551873492609465,0,0,1.96721934452011,0.757412781613119,0,0,0.430846795465598,0.477937595905104,0,0.849229592366497,0,0.876767573733936,0,0,0.141940085208269,0,0,0.329940245945071,0,0.242780636154981,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,1.64270195644597,4.02480934641258,0.220528398054962,0.98931751764888,0.484393280087717,0.361877549568935,0.477489376012546,0.984845398470368,0.291480836629851,0,0.854354403989263,0,0.370389054739423,0.188368457004691,0.546776910884101,0.457556346413045,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0.56369293868419,0,0,0,0,0.168956125490778,0.234714477291508,0,0.104859344425711,0.483168241652012,0,0.316011120628178,0.608175645870493,0.308132871494482,0.25984164595559,0.358053391334963,0,0.240390899039938,0,0,0.0762068066549998,0.201652370273681,0.38983152295901,0.192423683280659,0.116876902181569,0.453460767230423,0.887943813496259,0.448569283047378,2.18250001273302,0.19318959403219,1.68914227906064,0.183151624267265,0.643105137237198,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0.50695859978048,0.188626341386076,0.561849044819294,0.192075457214608,0.229741875822453,0,0,0,0,0,0,0,0,0,0.282328141245992,0.0846146078916765,0,0,0,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,0.429742108096597,0.191288332068843,0.661774257358546,0.463735671240843|short_description=p6@Sbno2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:216161 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q7TNB8 | |||
|association_with_transcript=14bp_to_uc007gbm.1_5end | |||
|cluster_id=chr10:79563899..79563917,- | |||
|description=CAGE_peak_6_at_Sbno2_5end | |||
|id=chr10:79563899..79563917,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.29e-11,6;CL:0000187,1.29e-11,6;CL:0000056,1.29e-11,6;CL:0000222,7.82e-10,7;CL:0000066,1.18e-07,25;CL:0000355,1.85e-07,9;CL:0000682,1.94e-07,3;CL:0000473,3.25e-07,7;CL:0002494,7.02e-07,3;CL:0000737,7.02e-07,3;CL:0000746,7.02e-07,3;CL:0000513,7.02e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!2.98e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004923,1.07e-09,24;UBERON:0000344,1.81e-09,15;UBERON:0000947,4.48e-08,4;UBERON:0001637,4.48e-08,4;UBERON:0004573,4.48e-08,4;UBERON:0003509,4.48e-08,4;UBERON:0004571,4.48e-08,4;UBERON:0010191,4.48e-08,4;UBERON:0004572,4.48e-08,4;UBERON:0001134,1.85e-07,9;UBERON:0002036,1.85e-07,9;UBERON:0002385,1.85e-07,9;UBERON:0000486,1.85e-07,9;UBERON:0007503,1.85e-07,9;UBERON:0001015,1.85e-07,9;UBERON:0002329,1.85e-07,9;UBERON:0003082,1.85e-07,9;UBERON:0003059,1.85e-07,9;UBERON:0007282,1.85e-07,9;UBERON:0004290,1.85e-07,9;UBERON:0009618,1.85e-07,9;UBERON:0001242,4.72e-07,13;UBERON:0001262,4.72e-07,13;UBERON:0004786,4.72e-07,13;UBERON:0005631,8.40e-07,3;UBERON:0000478,8.40e-07,3;UBERON:0000158,8.40e-07,3 | |||
|phase1_expression=0,11.8651638597383,10.4649825059593,3.0246421130683,2.00358291978539,0.671517087647559,0.700837921786577,0,0,0,0,0,0,0,0.333109761815663,0,0,0.157731082679119,0,0.42438965179803,0.425216450755349,0,0,1.43993180514066,1.83527424853736,5.7423196411502,6.03066794622705,5.38678081714723,0.190023419456374,1.76421090831952,2.21730510655305,0,0,0,0,0,0,0,0,0,0,0,0,1.38486499773135,2.02753862439029,3.12029478674859,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,3.08711323243136,3.72493471920384,2.06268836910977,0,0,0,1.69422266034566,0.889294796111139,1.3498495759221,0.988866362566974,2.8419204597844,1.79760066311043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28734528666413,0.982430281388212,0.579728977403356,0,1.3599426674155,0,1.29955283489534,1.79210754838934,0,1.02258193546835,1.29893002301434,0,0,3.84979432242953,0,0,0,0,0,0.5709193985953,2.07150306917737,1.1875371125186,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0.879666139307728,5.93267922562497,2.89198713839823,0,0.323533699894818,0,0,0,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.373220911830279,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,7.26921322564356,1.58670339998127,0,0,0.128867461322093,0,0,0.190225626112559,4.2707615539006,0,0,0.198956472041151,0.58489226135736,1.79763881730844,0.648414149624083,0.796565093017469,0,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0,0,0.246794327843601,0.592905254174298,0,0.196558995113203,0,0.202860121388503,0.482354319504834,0,0.575392274901621,0,0.823684239564244,0,0,0.312037673114561,0,0.358794827043824,0,1.66277871149944,0,0,0,0,1.34005005953453,1.19021820443007,0.195133647857799,0.157635144106191,0.664394068946325,0.956728611944923,0.655453258862952,1.72684981865896,1.73578870297814,0,1.63171705145613,1.47529281905711,0.551873492609465,0,0,1.96721934452011,0.757412781613119,0,0,0.430846795465598,0.477937595905104,0,0.849229592366497,0,0.876767573733936,0,0,0.141940085208269,0,0,0.329940245945071,0,0.242780636154981,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,1.64270195644597,4.02480934641258,0.220528398054962,0.98931751764888,0.484393280087717,0.361877549568935,0.477489376012546,0.984845398470368,0.291480836629851,0,0.854354403989263,0,0.370389054739423,0.188368457004691,0.546776910884101,0.457556346413045,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0.56369293868419,0,0,0,0,0.168956125490778,0.234714477291508,0,0.104859344425711,0.483168241652012,0,0.316011120628178,0.608175645870493,0.308132871494482,0.25984164595559,0.358053391334963,0,0.240390899039938,0,0,0.0762068066549998,0.201652370273681,0.38983152295901,0.192423683280659,0.116876902181569,0.453460767230423,0.887943813496259,0.448569283047378,2.18250001273302,0.19318959403219,1.68914227906064,0.183151624267265,0.643105137237198,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0.50695859978048,0.188626341386076,0.561849044819294,0.192075457214608,0.229741875822453,0,0,0,0,0,0,0,0,0,0.282328141245992,0.0846146078916765,0,0,0,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,0.429742108096597,0.191288332068843,0.661774257358546,0.463735671240843 | |||
|short_description=p6@Sbno2 | |||
}} |
Revision as of 19:15, 4 August 2015
Short description: | p6@Sbno2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Sbno2_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_uc007gbm.1_5end |
EntrezGene: | 216161 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.29e-11 | 6 |
muscle cell | 1.29e-11 | 6 |
myoblast | 1.29e-11 | 6 |
mesodermal cell | 7.82e-10 | 7 |
epithelial cell | 1.18e-07 | 25 |
multi-potent skeletal muscle stem cell | 1.85e-07 | 9 |
M cell of gut | 1.94e-07 | 3 |
defensive cell | 3.25e-07 | 7 |
cardiocyte | 7.02e-07 | 3 |
striated muscle cell | 7.02e-07 | 3 |
cardiac muscle cell | 7.02e-07 | 3 |
cardiac muscle myoblast | 7.02e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
organ component layer | 1.07e-09 | 24 |
mucosa | 1.81e-09 | 15 |
aorta | 4.48e-08 | 4 |
artery | 4.48e-08 | 4 |
systemic artery | 4.48e-08 | 4 |
arterial blood vessel | 4.48e-08 | 4 |
systemic arterial system | 4.48e-08 | 4 |
aortic system | 4.48e-08 | 4 |
arterial system | 4.48e-08 | 4 |
skeletal muscle tissue | 1.85e-07 | 9 |
striated muscle tissue | 1.85e-07 | 9 |
muscle tissue | 1.85e-07 | 9 |
multilaminar epithelium | 1.85e-07 | 9 |
epithelial vesicle | 1.85e-07 | 9 |
musculature | 1.85e-07 | 9 |
somite | 1.85e-07 | 9 |
myotome | 1.85e-07 | 9 |
presomitic mesoderm | 1.85e-07 | 9 |
presumptive segmental plate | 1.85e-07 | 9 |
dermomyotome | 1.85e-07 | 9 |
trunk paraxial mesoderm | 1.85e-07 | 9 |
intestinal mucosa | 4.72e-07 | 13 |
wall of intestine | 4.72e-07 | 13 |
gastrointestinal system mucosa | 4.72e-07 | 13 |
extraembryonic membrane | 8.40e-07 | 3 |
extraembryonic structure | 8.40e-07 | 3 |
membranous layer | 8.40e-07 | 3 |